Tag: arm64

Install CUDA on NVIDIA Jetson Nano

Hardware Pre-requisite Jetson Nano A 5V 4Ampere Charger 64GB SD card Software Preparing Your Raspberry Pi Flashing Jetson SD Card Image Unzip the SD card image Insert SD card into your system. Bring up Etcher tool and select the target SD card to which you want to flash the image….

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Warning messages on Apple M1 BigSur

Warning messages on Apple M1 BigSur 0 @095e334e Last seen 4 hours ago Hong Kong Hi, Does bioconductor supports the binary of R created specifically for arm chips already ? I get the following warning when trying to install any Bioconductor packages: 1: In .inet_warning(msg) : unable to access index…

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No such file or directory when downloading DESeq2 package

error: cannot execute ‘f951’: execvp: No such file or directory when downloading DESeq2 package 0 @8e03f28b Last seen 4 hours ago United States When I download a package (DESeq2) from Bioconductor, I got the following error: gfortran: fatal error: cannot execute ‘f951’: execvp: No such file or directory compilation terminated….

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install GenomicFeatures fail

install GenomicFeatures fail 1 @5b9023e7 Last seen 19 hours ago China BiocManager::install(‘GenomicFeatures’) results show ‘getOption(“repos”)’ replaces Bioconductor standard repositories, see ‘?repositories’ for details replacement repositories: CRAN: mirrors.tuna.tsinghua.edu.cn/CRAN/ Bioconductor version 3.14 (BiocManager 1.30.16), R 4.1.0 (2021-05-18) Installing package(s) ‘GenomicFeatures’ also installing the dependencies ‘Rhtslib’, ‘Rsamtools’, ‘GenomicAlignments’, ‘rtracklayer’ Packages which are only…

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spots not filling the whole tissue image

Issue with Seurat SpatialPlot: spots not filling the whole tissue image 0 In Seurat, SpatialPlot generates a plot with an enlarged/expanded image of tissue section as compared to the original spot image. This seems to happen on the relatively small image with a number of spots around 500. I ‘d…

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