Tag: CIRI-full


Introduction Welcome to circAtlas 3.0 (a gateway to consistently curated vertebrate circular RNAs). circAtlas 3.0 contains a compendium of 2,674 RNA-seq libraries from 33 normal tissues from human, macaque, mouse, rat, rabbit, cat, dog, pig, sheep and chicken. Main characteristics of circAtlas include: circAtlas uses the standardized nomenclature scheme proposed…

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question about running CIRI-full

question about running CIRI-full 1 I’m using ciri-full to calculate the full length sequence of circRNAs ,and I can run the test data set successfully, but I can’t run my own data running test data set: java -jar ../CIRI-full.jar Pipeline -1 test_1.fq.gz -2 test_2.fq.gz -a test_anno.gtf -r test_ref.fa -d test_output/…

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