Categories
Tag: CLIP
Ubuntu Manpage: gt-encseq-encode – Encode sequence files (FASTA/FASTQ, GenBank, EMBL) efficiently.
Provided by: genometools_1.6.5+ds-2_amd64 NAME gt-encseq-encode – Encode sequence files (FASTA/FASTQ, GenBank, EMBL) efficiently. SYNOPSIS gt encseq encode sequence_file [sequence_file [sequence_file …]] DESCRIPTION -showstats [yes|no] show compression results (default: no) -ssp [yes|no] output sequence separator positions to file (default: yes) -des [yes|no] output sequence descriptions to file (default: yes) -sds [yes|no]…
Creating valid json file for pytorch model – Models
I built a simple clip model using pytorch and uploaded to huggingface manually, I want to use it with transformer library, I added a config json file but when i try to load to model it throws not valid json file error: from transformers import CLIPProcessor, CLIPModel model_identifier=”umarigan/turkish_clip” processor =…
How To Trim Video On iPhone 13
Source: Youtube.com The iPhone 13 is a powerful and feature-rich device that allows users to do so much more than just make calls and send messages. One of the many capabilities of the iPhone 13 is its ability to edit and trim videos directly on the device itself. Whether you…
r – Add colour scale to axis of ggplot
Sure could this be achieved but I don’t know of any easy and general approach and hence at least for the approach below it requires some fiddling to position the legend and to set the height of the colorbar. Note that all these values are also dependent on the size…
Helen Flanagan shows off her figure in a white mini skirt and black fur-trim top as she poses for sizzling snaps (and her engagement ring is STILL on)
Helen Flanagan looked stunning as she posed for a slew of racy Instagram pictures on Sunday. The former Coronation Street star, 33, displayed her toned physique in sizzling mirror selfies, which also clearly showed her engagement ring from ex-fiancé Scott Sinclair. Helen and the Bristol Rovers footballer split in July 2022 after 13…
Edge Trim Plus – Plastic Trims & Edge Guards
DOWNLOAD EDGE TRIM PLUS FLYER Edge Trim Plus Spec Sheet can be viewed below or downloaded by clicking here. Description Trim-Lok’s Edge Trim is a flexible Poly Vinyl Chloride (PVC) edge trim with a brand-new gripping tongue configuration and individual internal aluminum clips to provide an extremely strong grip. Edge…
Midjourney Alpha, Google Imagen 2, and a Klingon Santa
Happy Sunday, friends! Welcome back to 10X AI: a weekly look at beginner-focused AI news, tools, and tips. This is the last 10X AI issue of 2023. The next two Sundays are Christmas and New Year’s Eve, and we all deserve a bit of time with the family, away from…
Imagen 2: New AI Tool for Text-to-Image Generation
Readers like you help support Cloudbooklet. When you make a purchase using links on our site, we may earn an affiliate commission. Have you ever wished you could turn your words into pictures? Imagine being able to create realistic images from simple text descriptions, such as “a blue sky with…
ggplot2 – Adding a box around a caption in R
One option would be to switch to ggtext::element_markdown which has a lot more options than element_text and allows to for an outline: library(ggplot2) library(ggtext) df <- as.data.frame(data(“iris”)) ggplot(data = iris, aes(x = Species, y = Petal.Width)) + geom_bar(stat = “identity”, position = “identity”) + labs(caption = “Add box around me”)…
pytorch – Semi-Gradient SARA implementation, catastrophic forgetting
I was trying to implement the semi-gradient SARSA algorithm (see p.244 Reinforcement Learning: An Introduction) using PyTorch: class SemiGradientSARSA(nn.Module): def __init__(self, env, hidden_dim, lr, epsilon) -> None: super().__init__() self.state_space = env.observation_space.shape[0] self.action_space = env.action_space.n self.goal_position = 0.5 # used for customizing the reward function in MountainCar self.starting_position = -0.5 #…
Bec Judd shows off her trim figure in $190 bikini as she heads to Byron Bay for the summer holidays – after promoting $2,450 worth of candles
By Marta Jary For Daily Mail Australia Published: 07:29 GMT, 15 December 2023 | Updated: 09:52 GMT, 15 December 2023 Bec Judd is off to Byron Bay for the Christmas holidays to have some fun in the sun with her family. On Friday, the 49-year-old showed off her looks for…
Gradient accumulation gives different results compared to full batch – autograd
Miguel_C (Miguel) December 15, 2023, 12:30am 1 I’m building an image captioner using Huggingface models with Pytorch and I’m getting different results for the first iteration (and for the following iterations obviously) when the effective batch size is the same (mini batch of 4 with 16 gradient accumulation steps vs…
Conserved and divergent gene regulatory programs of the mammalian neocortex
Nucleus preparation from frozen brain tissue for Chromium single-cell multiome ATAC and gene expression analysis M1 tissue was obtained from three human donors (male, aged 42, 29 and 58 years), three macaque donors (male, aged 6 (Macaca mulatta), 6 (M. mulatta) and 14 (Macaca fascicularis) years), three marmoset (Callithrix jacchus)…
New tool to analyze blood platelets holds maj
A novel technique to test platelet function within a person’s blood sample is faster, easier and more precise than methods currently in use, an experimental study shows. Nature Biomedical Engineering published the research, led by scientists at Emory University. The researchers demonstrated the proof-of-concept for the technique, which provides the…
Misleading posts about ‘E. coli bacteria in Covid vaccines’ spread online
Copyright © AFP 2017-2023. All rights reserved. Some strains of E. coli bacteria make people sick but most are harmless and the samples used to develop mRNA vaccines do not cause disease, scientists say, refuting misleading social media posts. Multiple virologists told AFP vaccines also undergo “vigorous” product testing to…
Gripsweat – Modern Soul Boogie 45 – Terry Gengis – Ooh Sha Sha – MCA
Modern Soul Boogie 45 – Terry Gengis – Ooh Sha Sha – MCA – VG+ promo! Sold Date: December 10, 2023 Start Date: December 3, 2023 Final Price: $283.00 (USD) Bid Count: 17 Seller Feedback: 89570 Buyer Feedback: 0 Audio Clips: Media grade: VG+, light spotting on labels Listing Information…
Science Can Make Trimming Claws Less Stressful
Scientists may have come up with a risk-free way to trim a cat’s claws, both at home and in a shelter. Trimming a cat’s nails is important for not just their comfort and health, but for protection of furniture in the house. However, cats tend not to take too kindly…
How to properly mock a (Pysam) read
I am creating a custom softclipping tool due to a limitation found in Ampliconclip Issue softclipping reads when they belong and don’t belong to a common amplicon. I am progressing ok in my development and I am developing tests. I found some limitations when I try to mock a Pysam…
Nikki Haley Claims 30 Minutes Of TikTok Makes Users 17 Percent More Antisemitic In Baffling Moment From Republican Primary Debate
There are many criticisms one could make of TikTok and the effect it’s had on society, but saying that it makes users exactly 17 percent more antisemitic is not one of them, according to viewers of Nikki Haley’s performance at yesterday’s Republican Primary debate. During the debate, which exclusively featured…
Electric Eels’ Shocking Ability To Alter The Genetics Of Nearby Animals
A new study has found that electric eels can alter the genetics of nearby animals through electrical discharges © Copyright by GrrlScientist | hosted by Forbes | LinkTr.ee The face of an electric eel. The massive electric organ in this species is made up of platelets of … [+] modified…
Electricity From Electric Eels May Transfer Genetic Material To Nearby Animals
EOD exposure from electric eel to zebrafish larvae. (A) This illustration depicts the experimental tank used to expose the recipient organism to the electric eel’s electric organ discharge (EOD). Within the tank, three carbon rod electrodes are placed: two inputs (colored black and red) and a ground electrode (colored green)….
Watch & Stream Online via Hulu
Futurama Season 2 is an animated sci-fi sitcom that follows the adventures of Philip J. Fry, a cryogenical who had been preserved for 1000 years but is brought back to life in 2999. Moreover, it was created by Matt Groening and released by Fox Broadcasting Company in November 1999. Here’s…
GPT Model Behind the Scene Exploring it from scratch with Pytorch by Chee Kean Artificial
GPT Model Behind the Scene: Exploring it from scratch with Pytorch CheeKean · Follow Published in Artificial Intelligence in Plain English 18 min read · Apr 22 Listen Share More Discover the intricacies of building and exploring a GPT model from scratch with an in-depth explanation that covers technical details…
tRNA therapeutics for genetic diseases
Huang, X. et al. The landscape of mRNA nanomedicine. Nat. Med. 28, 2273–2287 (2022). Article CAS Google Scholar Rohner, E., Yang, R., Foo, K. S., Goedel, A. & Chien, K. R. Unlocking the promise of mRNA therapeutics. Nat. Biotechnol. 40, 1586–1600 (2022). Article CAS Google Scholar Brown, A., Shao, S.,…
You Don’t Have to Pick a Winner in Gene-Editing. Do This Instead.
The pace of innovation in biotechnology is accelerating at a rapid clip. It took researchers 13 years to sequence the first full human genome. By contrast, it only took CRISPR Therapeutics (CRSP 4.57%) 10 years to bring their “molecular scissors” concept to market. With machine learning and artificial intelligence in…
openi_paper/pytorch-image-models: PyTorch image models, scripts, pretrained weights — ResNet, ResNeXT, EfficientNet, EfficientNetV2, NFNet, Vision Transformer, MixNet, MobileNet-V3/V2, RegNet, DPN, CSPNet, and more – timm/version.py at main – pytorch-image-models – OpenI
0.5.x 0.6.x attn_update bits_and_tpu cleanup_xla_model_fixes clip_laion2b convnext_and_copyright convnext_shortcut convnext_xxlarge_eps convnextv2 dataset_info dfnvit dinov2_reg4 dot_nine_cleanup dynamic_resize_vit edgenext_csp_and_more efficientnet_attn effnet_improve_features_only eva eva02 fix_tests fix_tests_210 fix_window_trace fixes-syncbn_pretrain_cfg_resolve fixes_bce_regnet focalnet_and_swin_refactor freeze_norm_revisit gh-pages hf_hub_revisit inception_next levit_efficientformer_redux main maxxvit_hub metaformer_baselines_for_vision mobileone more_attn more_datasets more_vit multi-weight multi-weight_effnet_convnext mw-deit mw-final mw-mlp_mixer mw-more mw-resnet norm_mlp_classifier norm_norm_norm onnx_export parse_kwargs parse_kwargs2…
Sports is only starting to imagine, and experience, the capabilities of generative AI. Will organizations bear the cost?
The PGA Tour demonstrated its generative AI virtual assistant at the Pro Am for Amazon’s re:Invent event in Las Vegas in late November. A video clip was generated after the AI assistant answered a question. Then the player would attempt to replicate the shot.Amazon The introduction of ChatGPT a year…
Function ‘SubBackward0’ returned nan values in its 1th output – autograd
I am trying to implement a model where the forward function calls to an external function that computes the values using the model’s parametes. class R_model(torch.nn.Module): def __init__(self,) : super().__init__() self.Kx = torch.nn.Parameter(torch.randint(-200, -100, (1,)).float()*0.0001) self.Ky = torch.nn.Parameter(torch.randint(-200, -100, (1,)).float()*0.0001) self.Kz = torch.nn.Parameter(torch.randint(-200, -100, (1,)).float()*0.0001) def forward(self): return generate_r(Kx=self.Kx, Ky=self.Ky,…
Elements of Grammar of Graphics
Components of a plot The grammar of graphics with a short introduction clip can give us an idea of how various components can integrate together to form a plot. Let’s learn more about these components, their role, and how they are connected to the ggplot2 package. It is an implementation…
Issue softclipping reads when they belong and don’t belong to a common amplicon
I need to soft-clip the primers of my amplicon reads and I have the following problem In scenario 1 I have forward and reverse reads in the same coordinates and I only want to soft-clip the first bases of each read (as shown in the example below) becaouse the reads…
Extracting only soft/hard clipped reads from a bam file
Extracting only soft/hard clipped reads from a bam file 4 Hello all! I am working on some data but need a little bit of help with a bit of an unusual task. We are looking at where lentiviral DNA has inserted itself in our host genome, and to do this…
Longitudinal detection of circulating tumor DNA
Analysis of Roche KAPA Target Enrichment kit experimental data obtained on an Illumina sequencing system is most frequently performed using a variety of publicly available, open-source analysis tools. The typical variant calling analysis workflow consists of sequencing read quality assessment, read filtering, mapping against the reference genome, duplicate removal, coverage…
r – add additional labels to y-axis without tickmark using ggplot2
You could try df <- data.frame( x = c(1, 2.6, 3, 4, 5), y = c(2, 5, 3.6, 8.2, 10), y_ticks = c(2, 4, 5, 8, 10), y_labels = c(“Low”, “Mid-Low”, “Medium”, “Mid-High”, “High”) ) # Create a scatter plot with custom y-axis ticks and labels library (ggplot2) ggplot(df, aes(x,…
ESRP1 controls biogenesis and function of a large abundant multiexon circRNA
doi: 10.1093/nar/gkad1138. Online ahead of print. Dawei Liu 1 , B Kate Dredge 1 , Andrew G Bert 1 , Katherine A Pillman 1 2 , John Toubia 1 3 , Wenting Guo 4 , Boris J A Dyakov 5 6 , Melodie M Migault 1 , Vanessa M Conn 1 7 , Simon J…
ESRP1 controls biogenesis and function of a large abundant multiexon circRNA | Nucleic Acids Research
Abstract While the majority of circRNAs are formed from infrequent back-splicing of exons from protein coding genes, some can be produced at quite high level and in a regulated manner. We describe the regulation, biogenesis and function of circDOCK1(2–27), a large, abundant circular RNA that is highly regulated during epithelial-mesenchymal…
Multimodal AI Market Growth, Opportunities Business Scenario, Share, Growth Size, Scope, Key Segments and Forecast to 2028
PRESS RELEASE Published November 29, 2023 “Google (US), Microsoft (US), OpenAI (US), Meta (US), AWS (US), IBM (US), Twelve Labs (US), Aimesoft (US), Jina AI (Germany), Uniphore (US), Reka AI (US), Runway (US), Jiva.ai (UK), Vidrovr (US), Mobius Labs (US), Newsbridge (France), OpenStream.ai (US), Habana Labs (US).” Multimodal Al Market…
ggplot2 – How to fix xlabels with multiple categories in R ggplot?
I am trying to generate a Bar plot with multiple categories using ggplot. I am having a hard time fixing the labels. I was trying to use the solution I found here: ggplot2 multiple sub groups of a bar chart But still the labels are not correct. The solution from…
How to get a Single Image from PyTorch DataLoader?
In order to train a PyTorch model you must read training data into memory, convert the data to PyTorch tensors, and serve the data in batches. This task is not trivial. In this tutorial, We will use PyTorch Dataset and DataLoader interfaces to serve up training data from the folder….
Implementing Early Convolutions for Improved Accuracy – vision
Thanks for helping me out. I am using a pre-trained ViT-b/16 model with pretrained CLIP. def load_clip_to_cpu(backbone_name): url = clip._MODELS[backbone_name] model_path = clip._download(url) try: model = torch.jit.load(model_path, map_location=”cpu”).eval() state_dict = None except RuntimeError: state_dict = torch.load(model_path, map_location=”cpu”) pretrained_dict = state_dict or model.state_dict() model = clip.build_model(pretrained_dict) return model The strucutre of…
How to run python experiments with Slurm and Conda? | by Hitesh Vaidya | Nov, 2023
source: getyarn.io/yarn-clip/368e3529-f540-4cfa-af28-d40a2ca2b99d As data scientists and researchers, efficiently managing multiple machine learning experiments is fundamental to our work. Tools like Slurm and Conda offer powerful capabilities that streamline the execution of experiments on high-performance computing clusters while ensuring environment consistency and reproducibility. In this blog, we will take a look…
NOT REAL NEWS: A look at what didn’t happen this week
A roundup of some of the most popular but completely untrue stories and visuals of the week. None of these are legit, even though they were shared widely on social media. The Associated Press checked them out. Here are the facts: ___ No evidence that DNA sequence used in Pfizer…
A look at what didn’t happen this week
FILE – A health worker administers a dose of COVID-19 vaccine during a vaccination clinic in Reading, Pa. On Friday, Nov. 24, 2023, The Associated Press reported on stories circulating online incorrectly claiming Pfizer’s COVID-19 vaccine contains a DNA sequence called Simian Virus 40 that can cause health problems, including…
FOX Sports teams with Google Cloud to enhance viewer experience with generative AI
Over the past nearly three decades, FOX Sports, a unit of FOX Corp., parent to Fox News and FOX Business, has accumulated a countless amount of video footage. Millions of hours’ worth of sports-related content live within vast archives. At any given time, various individuals have been tasked with sorting…
Murine Orchiectomy and Ovariectomy to Reduce Sex Hormone Production
The overall goal of this procedure is to demonstrate the surgical removal of murine testes and ovaries in a fast, safe, and effective manner. Murine orchiectomy is performed by a ventral midline incision into the scrotal sac, where the testes are isolated and removed, followed by closure of the skin…
Fact Check: Pfizer COVID-19 Vaccine Shows NO DNA “Contamination”, Permanent Genetic Changes Or Death From Cardiac Arrest
No DNA Changes Is the Pfizer mRNA COVID-19 vaccine “contaminated” with a type of DNA that causes permanent genetic changes in vaccinated people or leads to death due to cardiac arrest? No, that’s not true: The Food and Drug Administration (FDA) told Lead Stories that residual DNA found in Pfizer’s…
Revolutionize Q&A with OpenAI
Revolutionize Q&A with OpenAI Introduction The Workshop between Open AI and Pinecone How to Define a PyTorch Tensor of Zeros Ways to Create a PyTorch Tensor of Zeros Using the PyTorch torch.zeros Function Using the PyTorch torch.zeros_like Function Using the PyTorch torch.empty Function Sources of the Data What is Open…
Google (US), OpenAI (US) and Twelve Labs (US) are leading players in Multimodal AI Market
The multimodal AI market is expected to grow from USD 1.0 billion in 2023 to USD 4.5 billion in 2028, at a CAGR of 35.0% during the forecast period. The multimodal AI market is driven by various factors, such as the need to analyze unstructured data in multiple formats drives…
Visualize Cronbach’s alpha in R Ggplot scatterplot as a regression line?
I’m looking for a way to make a scatterplot of the correlation between two questionnaires using Cronbach’s alpha: Data: measurements <- matrix(c(2, 1, 2, 1, 0, 1, 1, 1, 0, 0, 2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 2, 0, 0, 0, 0, 0, 0, 0,…
R register_theme_elements — EndMemo
R register_theme_elements The underlying structure of a ggplot2 theme is defined via the element tree, which specifies for each theme element what type it should have and whether it inherits from a parent element. In some use cases, it may be necessary to modify or extend this element tree and…
Predicting circRNA-disease association using heterogeneous network and meta-path
[1] H. L. Sanger, G. Klotz, D. Riesner, H. J. Gross, A. K. Kleinschmidt, Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures, Proc. Natl. Acad. Sci. USA, 73 (1976), 3852–3856. doi.org/10.1073/pnas.73.11.3852 doi: 10.1073/pnas.73.11.3852 …
r – What do I need to do to modify my plot (ggplot2) to a gt table?
I know it’s generally frowned upon to ask multiple questions in a thread but I want to make sure I’m going down the right path with my sub-steps. I would like to add the following ggplot to a gt table as outlined here. This plot shows a selected player’s goals…
IBM turns the corner with Watson: Why 2.0 is a breakthrough opportunity
With Watson 1.0, IBM Corp. deviated from the Silicon Valley mantra — fail fast — as it took nearly a decade for the company to pivot off of its original vision. In our view, a different dynamic is in play today with Watson 2.0 – that is, watsonx. IBM’s deep…
r – ggplot align main axis.ticks length with minor axis.ticks length
You could do this by removing the axis ticks completely and using a polylineGrob annotation at the exact locations and with the exact lengths you want. This also means you don’t need the segmentdata data frame. ggplot() + geom_point(data = df, aes(x = x, y = y)) + annotation_custom(grid::polylineGrob( x…
Sage Research Methods Video: Data Science, Big Data Analytics, and Digital Methods
Format APA APA Chicago Harvard MLA AMA Denny, M. (Academic). (2017). Introduction to rstudio: accessing rstudio functionality [Video]. Sage Research Methods. doi.org/10.4135/9781526472540 Denny, Matthew. “Introduction to RStudio: Accessing RStudio Functionality.” In Sage Video. London: SAGE Publications Ltd, 2017. Video, 00:15:54. doi.org/10.4135/9781526472540. Denny, M., 2017….
r – Custom x-axis labels not applying correct custom x-axis colours
Using external vectors (a here) in non-NSE elements of ggplot2 expressions can be problematic, since the order of how a is applied is not necessarily (often is not at all) the same as the order of the columns. I suggest putting the colors into the frame itself. I’m inferring that…
Studies Identify Novel Underpinnings of Genetic ALS
Evangelos Kiskinis, PhD, associate professor in the Ken and Ruth Davee Department of Neurology’s Division of Neuromuscular Disease and of Neuroscience, was senior author of studies published in Science Advances and Cell Reports. A pair of recent studies from the laboratory of Evangelos Kiskinis, PhD, associate professor in the Ken…
Technical Refinement of a Bilateral Renal Ischemia-Reperfusion Mouse Model for Acute Kidney Injury Research
Summary This study established a protocol focusing on the technical refinement of a mouse model of bilateral renal ischemia-reperfusion for acute kidney injury research. Transcript Acute kidney injury is a major risk factor associated with high mortality in patients with cardiac arrest after return of circulation. This procedure can be…
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Q3 2023 Pacific Biosciences of California Inc Earnings Call
Participants Christian O. Henry; President, CEO & Director; Pacific Biosciences of California, Inc. Susan G. Kim; CFO; Pacific Biosciences of California, Inc. Todd Friedman; Former Director of IR; Pacific Biosciences of California, Inc. Daniel Gregory Brennan; MD and Senior Tools & Diagnostics Analyst; TD Cowen, Research Division Eve Burstein Jack…
epialleleR: an R/Bioconductor package for sensitive allele-specific methylation analysis in NGS data | GigaScience
Abstract Low-level mosaic epimutations within the BRCA1 gene promoter occur in 5–8% of healthy individuals and are associated with a significantly elevated risk of breast and ovarian cancer. Similar events may also affect other tumor suppressor genes, potentially being a significant contributor to cancer burden. While this opens a new…
Google Cloud Q3 Growth Falls to 22%; Alphabet CEO Pichai Blames ‘Optimization’
After posting revenue growth of 28% for each of the first two quarters of 2023, Google Cloud last week reported its Q3 growth rate tumbled to 22%, with Alphabet CEO Sundar Pichai making the rather bizarre claim that the slide is due to customers just beginning to clamp down on…
Microsurgical Creation of Giant Bifurcation Aneurysms in Rabbits for the Evaluation of Endovascular Devices
Here, we describe the technique for the microsurgical creation of giant bifurcation aneurysms in rabbits for the evaluation of endovascular devices. Reliable animal models for giant aneurysms are rare. However, these models are extremely important for the development of new endovascular devices to treat these aneurysms safely. The advantages of…
COVID-19 Vaccines Have Not Been Shown to Alter DNA, Cause Cancer
SciCheck Digest Small amounts of DNA from the manufacturing process may remain in the mRNA COVID-19 vaccines. Purification and quality control steps ensure any leftover DNA is present within regulatory limits. There isn’t reason to think that this residual DNA would alter a person’s DNA or cause cancer, contrary to claims made…
Alphabet Inc. (NASDAQ:GOOG) Q3 2023 Earnings Call Transcript
Alphabet Inc. (NASDAQ:GOOG) Q3 2023 Earnings Call Transcript October 24, 2023 Operator: Welcome, everyone. Thank you for standing by for the Alphabet Third Quarter 2023 Earnings Conference Call. At this time, all participants are in listen-only mode. After the speaker presentation, there will be a question-and-answer session. [Operator Instructions] I…
Q3 2023 Alphabet Inc Earnings Call
Participants James H. Friedland; Director of IR; Alphabet Inc. Philipp Schindler; Senior VP & Chief Business Officer; Google LLC Ruth M. Porat; President, CIO, Senior VP & CFO; Alphabet Inc. Sundar Pichai; CEO & Director; Alphabet Inc. Brian Thomas Nowak; Research Analyst; Morgan Stanley, Research Division Douglas Till Anmuth; MD;…
Invasive Californian death caps develop mushrooms unisexually and bisexually
Mushroom collecting Sporocarps were collected from various herbaria and during three expeditions to Point Reyes National Seashore (PRNS), California in 2004, 2014 and 2015, and in 2015 from three sites in Portugal. A total of 86 sporocarps were collected: 67 Californian sporocarps (one early herbarium sample dates to 1993), 11…
Using SAM for the Prediction of Segmentations on the Kaggle Football Player Segmentation Dataset
Welcome to the latest installment of our ongoing blog series where we highlight notebooks and datasets from the FiftyOne Examples GitHub repository. The fiftyone-examples repository contains over 30 notebooks that make it easy to try various computer vision workflows and explore their associated datasets. In this post, we take a…
More to Huawei sales success than Mate 60 Pro Kirin 9000 chip
“The most controversial phone of the year,” might not be the praise that Huawei was looking for when it launched the high-end Mate Pro 60, which included a significant chip upgrade. But executives at the firm will warm to the response if it signals that the Chinese multinational technology company…
Andrew Bridgen MP speech in the UK Parliament concerning excess deaths
Watch Andrew Bridgen MP speaking about excess deaths in the UK Parliament today. We are using a Youtube clip of the speech below, but we have locally cached a copy of the full speech in the event that it is censored by Youtube, and will post that copy here if…
Use These AI Tools to Get Started on YouTube
Artificial intelligence is rapidly changing how content creators make videos and podcasts. While starting a YouTube channel remains as simple as turning on the front-facing camera on your phone, those looking for an edge are turning to AI for everything from script development to voiceovers, thumbnails, and editing. Here are…
20 Biggest Social Media Mistakes By Companies in 2023
In this article, we will look at the 20 biggest social media mistakes by companies in 2023. If you want to skip our detailed analysis of the social media industry, you can go directly to 5 Biggest Social Media Mistakes By Companies in 2023. According to a report by Research and…
R: Polygon ggplot
gg_polygon {ggblanket} R Documentation Polygon ggplot Description Create a polygon ggplot with a wrapper around ggplot2::geom_polygon(stat = “identity”, …). Usage gg_polygon( data = NULL, x = NULL, y = NULL, col = NULL, facet = NULL, facet2 = NULL, group = NULL, subgroup = NULL, text = NULL, mapping =…
Most sensible way to find private SNPs from a multisamples vcf with bcftools
Hello, this question is somehow complementary to what I asked yesterday here: Using bcftools to find unique alt homozygous sites Now let’s say I want to find the SNPs 0/1 unique to the sample D3A350g_bcftools2 (see below) I know I can use bcftools view -s D3A350g_bcftools2.bcf -x all_bcftools2_merged.vcf But there…
Using bcftools to find unique alt homozygous sites
Hello, I have a vcf with 20 samples. I want to find for each sample the sites that are 1/1, only in that sample (so other samples must have genotypes 0/1 or 0/0). I know I can use filters such as GT=”aa”‘ However, how do I say GT=”aa” for sample…
python – Loss in validation with Pytorch result NaN or a high loss
I’m try to train a deep learning and when I put someone value, or show “Perda NaN” (Loss NaN) or Loss in validation so high. Learning hate to be 0.08 and momentum is 0. I need help. import torch from torch import nn, optim import torch.nn.functional as F from torchvision…
How to deal with reads which CIGAR is [0-9]+S
I am developing an NGS Bioinformatics pipeline to analyze somatic amplicon data. After mapping my reads, I soft-clip both ends of my reads because these reagions are the primers and I dont want them to be used for the variant calling. I soft-clip these regions with this simple code apptainer…
Tislelizumab vs Sorafenib as First-Line Treatment for Unresectable Hepatocellular Carcinoma: A Phase 3 Randomized Clinical Trial | Targeted and Immune Cancer Therapy | JAMA Oncology
Key Points Question How does the efficacy and safety profile of tislelizumab compare with that of sorafenib as first-line treatment among patients with unresectable hepatocellular carcinoma (HCC)? Findings In this phase 3 randomized clinical trial of 674 patients with HCC, tislelizumab demonstrated overall survival noninferiority compared with sorafenib, with numerically…
Focus on the Trend, Not the Noise
There are a lot of negative headlines out there right now… Yesterday, a rebellion led by Florida Republican Congressman Matt Gaetz led to the ouster of House Speaker Kevin McCarthy. It was the first time that a House Speaker was removed this way. Congress must approve new funding by November…
pytorch – Diffusion Model Failing to Learn
I’m trying to train a diffusion model to map between paired embedding spaces – ie using a CLIP text embedding to predict a CLIP image embedding. I have a working baseline model that predicts the target embedding directly using a MLP. The MLP model works well enough to validate the…
Machine Learning with Differential PrivacyImplement a
Machine Learning with Differential PrivacyImplement a classification model on CIFAR-10 and CIFAR-100 datasets. And then applydifferential privacy on the same model to achieve privacy protection. You can use TensorFlow,Pytorch, or another ML frameworks. The code should include the at least following components:1. Load and pre-process CIFAR-10 and CIFAR-100 datasets.2. Define…
Creating typewriter-styled maps in {ggplot2}
A couple of months ago I read a blog post by RJ Andrews, in which he described the process of making a map of California using a typewriter. It’s a beautiful map – made using over 2,500 keystrokes, all done by hand. The density of ink for each letter displays…
Definition and Specific Annotation Instructions for the 3D Cephalometric Landmarks
Start with the annotation of the preselected origin landmarks. The midpoint on the anterior border of the anterior curvature of the foramen magnum is called basion. To annotate basion for the axial section, locate the deepest end of the curvature of the section of the foramen magnum. For the sagittal…
Normothermic Ex Vivo Liver Machine Perfusion in Mouse
Normothermic Ex-Vivo Liver Machine Perfusion in Mouse. Normothermic oxygenated liver perfusion is a promising strategy to rescue marginal organs and has recently been introduced in clinical practice. However, the underlying molecular mechanisms are not well-understood. A mouse model is needed to further study the molecular pathways, taking advantage of genetically…
r – Turning off clipping for ggplot2 figures, but keep the thinner border drawing style?
From my understanding using half of the line width when clipping is turned off should do the job, i.e. if clipping is turned “on” then half of the border line is clipped off. library(ggplot2) p1 <- p2 <- ggplot(mtcars, aes(x = mpg, y = disp)) + geom_point() p1 + theme(…
Multi-Modal LLM NExT-GPT Handles Text, Images, Videos, and Audio
The NExT Research Center at the National University of Singapore (NUS) recently open-sourced NExT-GPT, an “any-to-any” multi-modal large language model (LLM) that can handle text, images, videos, and audio as input or output. NExT-GPT is based on existing pre-trained models and only required updating 1% of its total parameters during…
Vivek Agnihotri shares glimpse of Raima Sen’s journalist character whom ‘you will love to hate’
Vivek Agnihotri shares a glimpse of Raima Sen’s role as a journalist in The Vaccine War. As The Vaccine War nears its release, Vivek Agnihotri is adding to the excitement of the audience by unveiling a glimpse of different roles in the movie. Recently, the filmmaker shared a glimpse of…
How these work?different from github version – distributed
exporttorch.onnx.export(model, im, f, verbose=False, opset_version=opset,training=torch.onnx.TrainingMode.TRAINING if train else torch.onnx.TrainingMode.EVAL,do_constant_folding=not train,input_names=[‘images’],output_names=[‘output’],dynamic_axes={‘images’: {0: ‘batch’, 2: ‘height’, 3: ‘width’}, # shape(1,3,640,640)‘output’: {0: ‘batch’, 1: ‘anchors’} # shape(1,25200,85)} if dynamic else None)objdet import cv2import torchimport numpy as npimport timefrom onnxruntime import InferenceSession from utils import load_classes, preprocess, postprocess, plot_results if name == “main”: #…
mRNA vaccine quality analysis using RNA sequencing
Design and synthesis of reference plasmid A reference construct was first designed, with the intention of optimising the production of RNA therapeutics for pre-clinical research. The coding sequence of eGFP30 was selected as a reporter in the coding region, as its protein product can be assayed simply through Flow cytometry…
The Vaccine War actress Raima Sen opens up about nepotism, says ‘there is no such thing’
The Vaccine War actress Raima talked about nepotism and said she doesn’t believe in it. Bollywood actress Raima Sen, who is busy promoting her next film The Vaccine War directed by Vivek Agnihotri, will be seen playing the character of a journalist who is against the vaccination drive in India….
Top generative AI models reshaping enterprise technology in 2023, ETCIO SEA
Although the initial thrust of artificial intelligence (AI) has been initially on narrow AI viz. solving specific problems or scenarios and later on predictive AI viz. intelligently automating specific business processes with minimum supervision, the seeds of the now hugely disruptive generative AI were sown more than 80 years ago….
Sudha Murty hails Vivek Agnihotri’s The Vaccine War, calls it ‘heart-touching’ in viral video
Sudha Murty can be seen praising Vivek Agnihotri’s film The Vaccine War which stars Nana Patekar, Pallavi Joshi, Raima Sen, Girija Oak Godbole, and Sapthami Gowda. Filmmaker Vivek Ranjan Agnihotri, who is busy promoting his upcoming film The Vaccine War, shared a video in which renowned author and philanthropist Sudha…
Aedes aegypti Argonaute 2 controls arbovirus infection and host mortality
Generation and characterization of Ago2 knockout mutants To demonstrate the essential function of Ago2 in the Ae. aegypti siRNA pathway, we used CRISPR/Cas9 to knock out Ago2 and then investigated its role in defending against arbovirus infection (Fig. 1a). Ae. aegypti Ago2 (AeAgo2) has four exons and four predicated functional domains,…
Improve presentation of logistic regression plot R ggplot2
To reverse the order of the lines convert the variable mapped on group to a factor and reverse the order of the levels which could be achieved in one go using forcats::fct_rev. To get rid of the legend you could use a geom_text or a geom_label to add the labels…
python – Inconsistent PyTorch Lightning validation behaviour and checkpoints not saved
I am training a model with PyTorch Lightning and have defined the requisite validation_step method of my PyTorch Lightning as follows (abridging the other methods): class Tacotron2(pl.LightningModule): def __init__(self, cfg: DictConfig) -> None: super().__init__() # initialisation code here def training_step(self, batch, batch_idx: int) -> Tensor: # TODO typing x, (mel_target,…
Quantization of multi_head_attention_forward – quantization
Raghu (Raghu Nathan) September 14, 2023, 3:21am 1 Hi Team, Could someone help me with quantization of multi head attention layers in PyTorch ? I am new to PyTorch and have been experimenting quantization of OpenAI’s CLIP model in PyTorch. Specifically I’m trying to quantize (modified) ResNet encoders of CLIP…
Leela and Slurm Factory – Eat until you EXPLODE! by verucagloop on DeviantArt
BRAND NEW CLIP!! – Leela and Slurm Factory – Eat until you EXPLODE! Get the WHOLE clip HERE —–> curvage.org/forum/index.php?/f… Also Available on Manyvids, Clips4sale & Pay per clip Onlyfans —–>>> linktr.ee/verucagloop Paid Onlyfans subscriber got this clip in their inbox at a BIG Discount —->>> linktr.ee/verucagloop In my newest parody I play…
pytorch – What is wrong with my Torch HMDB51 Dataloader?
I’m trying to prepare a HMDB51 dataset for some image classification tasks. Have done this many times before in TF but this time I am working in PyTorch. Running into this strange problem when creating my dataloaders: import torchvision.transforms as T import torchvision.datasets as datasets val_split = 0.05 num_frames =…
How to Optimize Your DL Data-Input Pipeline with a Custom PyTorch Operator | by Chaim Rand
PyTorch Model Performance Analysis and Optimization — Part 5 Photo by Alexander Grey connected Unsplash This station is nan 5th successful a bid of posts connected nan taxable of capacity study and optimization of GPU-based PyTorch workloads and a nonstop sequel to portion four. In portion four, we demonstrated really…
Optimizely Partners with Google Cloud to Expand Generative AI Capabilities
As generative AI continues to march its way across the digital experience stack, platforms are looking to public cloud providers like AWS, Azure, and GCP to help scale their innovation and get AI-powered products to market faster. Now, Optimizely – a leading digital experience platform (DXP) provider – has announced…
Exosomal circEZH2_005, an intestinal injury biomarker, alleviates intestinal ischemia/reperfusion injury by mediating Gprc5a signaling
Human plasma collection Fifty patients who were assigned for CPB surgery between May 2021 and February 2022 at the Department of Cardiac Surgery, Southern Medical University Nanfang Hospital (Guangzhou, China) were recruited given their increased risk of intestinal I/R injury. In patients undergoing cardiac surgery, CPB is potentially responsible for…