Tag: EMBL-EBI

Genomics Beyond Health Care: Future Uses and Considerations of Genome Science

A major new report, Genomics Beyond Health, released today by the Government Office for Science, explores how genomics could play a role in our lives in the future, from sports to education and the fight against crime. Until now, genomics has been used primarily in healthcare and medical research where…

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Bioinformatician job with EMBL | 1401746299

Are you creative, curious, and ambitious and like to tackle challenging biological data analysis problems? We have an exciting opportunity for a bioinformatician interested in structural biological data and functional annotations to work within the Protein Data Bank in Europe Team (PDBe) at the European Bioinformatics Institute (EMBL-EBI). In this…

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Proteomics | EMBL-EBI Training

Feedback and help Who is this course for? An undergraduate degree in a life science subject or some background knowledge on the composition of proteins, would be an advantage. What will I achieve? By the end of the course you will be able to: Describe what is meant by…

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Researchers identify new bacteria and viruses on human skin

Data representing the diverse range of microbes found in the human skin microbiome. Credit: Karen Arnott/EMBL Researchers at EMBL’s European Bioinformatics Institute (EMBL-EBI), the National Institutes of Health (NIH) National Human Genome Research Institute (NHGRI), the NIH National Institute of Arthritis and Musculoskeletal and Skin Diseases, and colleagues have identified…

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Researchers identify new bacteria and viruses in human skin

Data representing a variety of microorganisms found in the human skin microflora. Credits: Karen Arnott / EMBL Researchers and colleagues at EMBL’s European Bioinformatics Institute (EMBL-EBI), National Institutes of Health (NIH) National Institute for Human Genome (NHGRI), NIH National Institute for Arthritis, Musculoskeletal and Skin Diseases are new bacteria and…

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Job Opportunity: HPC Engineer at European Bioinformatics Institute (EMBL-EBI) (Hinxton, UK)

New Job opportunity posted by European Bioinformatics Institute (EMBL-EBI): We are seeking a HPC engineer to join our Compute team within our Technical Services Cluster (TSC), serving an institute of over 800 researchers and technical staff. You will be working closely with members of the department, and more widely with…

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48 Postdoctoral and Academic Positions at The European Molecular Biology Laboratory, Germany

Postdoctoral and Academic Positions at The European Molecular Biology Laboratory (EMBL), a molecular biology research institution, Germany Scientific Officer – Protein Expression and Purification Core Facility Staff Member at EMBL Heidelberg Closes 14 February 2022 |  Grading: Grading: 4, 5 or 6; depending on experience and qualifications (monthly salary starting from 3.1k – 3.8k EUR…

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Postdoc Position in Bioinformatics in Stem Cell Neurobiology

DepartmentDepartment of Histology and Embryology  – Faculty of MedicineDeadline 28 Feb 2022Start date Jully 2022Job type full-timeJob field Science and research Medical Faculty of Masaryk University, Brno, Czech Republic, invites excellent scientists to apply for Postdoc position in Bioinformatics in Stem Cell Neurobiology   Description: The Department of Histology and Embryology is…

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Postdoc Position in Bioinformatics in Stem Cell Neurobiology job with MASARYK UNIVERSITY

Department Department of Histology and Embryology – Faculty of Medicine Deadline 28 Feb 2022 Start date Jully 2022 Job type full-time Job field Science and research Medical Faculty of Masaryk University, Brno, Czech Republic, invites excellent scientists to apply for Postdoc position in Bioinformatics in Stem Cell Neurobiology   Description: The Department of…

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AI-sparked life sciences revolution, greatest scientific achievement of 2021

The revolution that Artificial Intelligence has brought about for the life sciences has been considered by Science magazine the main scientific advance of the year 2021. The prestigious journal highlights the feat carried out by the DeepMind research laboratory, in association with the EMBL European Bioinformatics Institute (EMBL-EBI), which has…

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EMPIAR | EMBL-EBI Training

Feedback and help Who is this course for? This course is aimed at anyone who would like to learn more about EMPIAR. An undergraduate knowledge of a subject related to the life sciences would be an advantage. What will I achieve? By the end of the course you will…

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EBI-EMBL taps the cloud to accelerate biomedical research

Charged with storing and analysing hundreds of petabytes of life sciences research data, the European Bioinformatics Institute (EBI-EMBL) has a ravenous appetite for storage and compute infrastructure. Equipped with a £45m grant from UK Research and Innovation, the organisation recently struck a five-year strategic partnership with Google Cloud to help…

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Scientific Training Lead (Grants Programme) – Hinxton

Training is a core activity across EMBL-EBI, involving almost every part of the organisation and coordinated by a team of ~30 people. The Training Team delivers a world-recognised programme that encompasses courses delivered virtually and face-to-face to a global audience alongside self-paced online learning, up-skilling of trainers and secondments. The…

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Dec 10 | CS Colloquium Series: “Multi-scale Data Integration and Causal Inference for Biological and Medical …

Event listing from University of Pittsburgh: Friday, December 10 from 2:00 PM to 3:00 PM Abstract: The advancement of technologies for high-throughput collection of personal data, including environmental, lifestyle, clinical and biomedical data, has inadvertently transformed biology and medicine. Integrating and co-analyzing these different data streams has become the research…

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Research Support Officer job with EMBL

EMBL’s European Bioinformatics Institute (EMBL-EBI) is seeking a Research Support Officer to assist the Service Team Leaders leading EMBL-EBI’s resources with overall scientific management. The Research Support Officer role will provide an exciting opportunity to develop your skills in a wide range of areas. The nature of the role is…

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Senior Programme Manager – EMBL-EBI Services job with EMBL

EMBL’s European Bioinformatics Institute (EMBL-EBI) is seeking a Senior Programme Manager to lead strategic initiatives and projects to support the effective long-term management and delivery of the EMBL-EBI data services portfolio. These services make a variety of data openly available to support life sciences research, and are accessed millions of…

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A gallery of human RNA polymerases

The Müller group’s research provides the most detailed structural information yet about human RNA polymerase I. Cryo-electron microscopy has significantly improved as a powerful tool, offering scientists greater insight into what this enzyme looks like and how it works in human cells. Credit: Müller group/EMBL Using state-of-the-art technology and techniques,…

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European Bioinformatics Institute | EMBL-EBI hiring Software Engineer in Hinxton, England, United Kingdom

In this role you will analyse data, develop production software, create technical documents, take part in the daily Scrum meeting, as well as communicate with other teams at EMBL-EBI and/or with our international collaboration partners. Scalability will be an important feature of your clear, concise, well tested and documented code….

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EBI selects Google Cloud as strategic partner to accelerate the pace of research

Hosting the world’s most comprehensive set of freely available and up-to-date molecular data resources, EMBL’s European Bioinformatics Institute (EMBL-EBI) has announced it has chosen Google Cloud as a strategic cloud partner. As part of a new, comprehensive, five-year partnership, EMBL-EBI will tap Google Cloud’s innovative technologies and global infrastructure to…

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miRNAs and mRNAs in intestinal ischemia-reperfusion injury

Introduction Intestinal ischemia-reperfusion (II/R) injury is a severe clinical complication common in the Intensive Care Unit (ICU). It is associated with high morbidity and mortality.1 Usually, this problem is followed by various causes, including sepsis, shock, trauma, and so on.2 Intestinal ischemia-reperfusion injury destroys intestinal tissue and impairs the function…

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Improving processing and quality of DNA data for biodiversity research

These datasets reuse the globally comprehensive DNA sequence data that ENA and its partners, the National Centre for Biotechnology Information (NCBI)  and the DNA Data Bank of Japan, maintain in the International Nucleotide Sequence Database Collaboration (INSDC). EMBL-EBI maintains ENA, which supplied the first DNA-derived dataset shared through GBIF in…

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Full Stack Software Developer job with EMBL

An exciting opportunity has been created for a full stack software developer to work on the development of the ChEBI database (www.ebi.ac.uk/chebi/), which contains detailed information on small molecule compounds in biology. ChEBI is a very widely used resource, with a growing user base numbered in the hundreds of thousands…

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deepmind alphafold github

The program handily beat all competitors, in what one . This will allow us to run alphafold only using CPU ( which is what our VM has). From the developers’ original publication: “The provided inference . The AlphaFold method. Found insideThis book constitutes the refereed proceedings of the First International…

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3D-Beacons Network: protein structure data, all in one place

3D-Beacons Network acts as a one-stop shop for protein structures by combining and standardising data from several providers Cryo-EM structure of the BRCA1-UbcH5c/BARD1 E3-E2 module bound to a nucleosome. Image obtained from PDBe A new platform called 3D-Beacons Network brings together experimentally determined and predicted protein structure models and related…

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alphafold colab github

for the third time worked! Found inside – Page iiThe eight-volume set comprising LNCS volumes 9905-9912 constitutes the refereed proceedings of the 14th European Conference on Computer Vision, ECCV 2016, held in Amsterdam, The Netherlands, in October 2016. Please make sure you have a large enough hard drive space, bandwidth…

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ELIXIR Technical Officer (bioinformatician/data scientist) at EMBL-EBI

Job:ELIXIR Technical Officer (bioinformatician/data scientist) at EMBL-EBI 0 ELIXIR is seeking an inquisitive, people-oriented bioinformatician, life scientist or data scientist with wide interest in the multidisciplinary application of their skills to join us as a Technical Officer. ELIXIR is a research infrastructure that works with 23 European countries to help…

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Apply for AlphaFold DB Full-Stack Web Developer in Essex

We are looking for a full-stack web developer interested in structural biological data and predicted structures in the AlphaFold Protein Structure Database (AlphaFold DB) to join the Velankar team at the European Bioinformatics Institute (EMBL-EBI). This is an exciting opportunity to work as part of EMBL and DeepMind’s new partnership…

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Web Developer at European Molecular Biology Laboratory (EMBL)

About the team/job IT Services operates and supports the IT infrastructure and services at EMBL headquarters in Heidelberg and at the laboratory’s sites in Barcelona and Rome. In collaboration with the EMBL-EBI in Cambridge our team is creating and implementing a new web infrastructure for all EMBL websites. We are…

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Community Outreach Officer job with EMBL

We are looking to recruit a Community Outreach Officer for Europe PMC to work within the Literature Services team at the European Bioinformatics Institute (EMBL-EBI). Europe PMC provides free and open access to over 39 million publications (abstracts and full text), preprints and other documents enriched with links to data,…

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Personal chemistry

Philipp Geyer was interested in learning how protein levels in the blood change when a person tries to lose weight. Several years ago, Geyer, then a postdoctoral fellow, and his colleagues in Matthias Mann’s lab at the Max Planck Institute of Biochemistry began to analyze samples from a dieting study,…

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A Closer Look at Type 1 Diabetes Causal Variants

By Allison Proffitt September 7, 2021 | Stephen Rich’s group at the University of Virginia along with John Todd’s team at the University of Oxford, have been tracing the genes responsible for type 1 diabetes for years. In 2009 the team conducted the largest GWAS metanalysis of type 1 diabetes,…

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Ligand GNP bound in PDB entry 7obq ‹ Protein Data Bank in Europe (PDBe) ‹ EMBL-EBI

  The above 2D and 3D (Mol*) views of ligand interactions use quaternary structure derived from the PDB entry. Please note: Some chain IDs in the tooltip are followed by a number in square brackets. This number corresponds to the operation ID (mmCIF ‘oper_expression’) used to transform the chain. The…

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Link between amino acid and a range of common diseases could help predict personal risk – Wellcome Sanger Institute

  Researchers have identified a link between mitochondrial DNA variants, amino acid fMet, and a range of common, late-onset diseases One of the first population-scale studies on how common genetic traits are influenced by variations in the DNA of mitochondria, the powerhouses of human cells, has been completed by scientists…

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Could amino acid finding from Cambridge scientists help predict our personal risk of common diseases?

Inside our cells are mitochondria, which act as their powerhouses – generating about 90 per cent of the energy required for the biochemical reactions required for them to function. This is just one of the vital biological functions of these organelles, which are unique in having their own genetic code….

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Research Scientist / Technical Officer X-ray Imaging at European Molecular Biology Laboratory (EMBL)

About the team/job We are seeking two highly motivated X-ray Imaging Research Scientists/Technical Officers to join EMBL Hamburg. EMBL Hamburg has implemented a full-field X-ray microscope on beamline P14 on the PETRA III synchrotron at DESY (Hamburg, Germany). For recent references, see: Polikarpov et al. (2019) Acta Cryst. D75:975, Geier…

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The association of amino acids with various common illnesses can help predict an individual’s risk

Mitochondria.Credits: Wikipedia Commons One of the first population-scale studies on how common genetic traits are affected by changes in mitochondrial DNA, the driving force of human cells, was the European Molecular Biology Laboratory at the Wellcome Trust Sanger Institute, University of Cambridge, EMBL. Tokoro (EMBL-EBI) and its collaborators. The team…

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Link between amino acid and a range of common diseases could help predict personal risk

Mitochondria.Credits: Wikipedia Commons One of the first population-scale studies on how common genetic traits are affected by changes in mitochondrial DNA, the driving force of human cells, was the European Molecular Biology Laboratory at the Wellcome Trust Sanger Institute, University of Cambridge, EMBL. Tokoro (EMBL-EBI) and its collaborators. The team…

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HPC Engineer at European Molecular Biology Laboratory (EMBL)

About the team/job We are seeking a HPC engineer to join our Compute team within our Technical Services Cluster (TSC), serving an institute of over 800 researchers and technical staff. You will be working closely with members of the department, and more widely with technical users across EMBL-EBI, playing an…

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Eukaryotic Annotation Team Leader job with EMBL

We are seeking a faculty-level genome scientist to lead the Eukaryotic Annotation Team at the European Molecular Biology Laboratory’s European Bioinformatics Institute (EMBL-EBI).  As Team Leader you will have strategic responsibility for gene annotation and comparative genomics in the Ensembl project, and also lead the EMBL contribution to a portfolio…

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Open Science and Research Information Officer (Heidelberg, DE or Hinxton, UK)

Description Open Science and Research Information Officer (Heidelberg, DE or Hinxton, UK) – 2 positions available Location: Heidelberg, Germany Staff Category: Staff Member Contract Duration: 3 years (renewable) Grading: 4, 5 or 6; depending on qualifications and experience Closing Date: 19 September 2021 Reference Number: HD02025 EMBL is looking for…

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Human genomics and translational data (ELIXIR/EMBL-EBI, Cambridge, UK)

Job:Scientific Officer: Human genomics and translational data (ELIXIR/EMBL-EBI, Cambridge, UK) 0 ELIXIR is seeking a Scientific Officer to drive stakeholder engagement, document the landscape and identify key requirements relevant for the continued successful implementation of ELIXIR’s federated infrastructure for access to human genomics and translational data. We want to ensure…

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