Tag: GenePattern

genepattern/Salmon.Indexer: Salmon indexer wrapper module for GenePattern.

GitHub – genepattern/Salmon.Indexer: Salmon indexer wrapper module for GenePattern. You can’t perform that action at this time. You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. Read more here: Source link

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Significant q-value with 0 actual copy change sample in GISTIC2.0 result.

Significant q-value with 0 actual copy change sample in GISTIC2.0 result. 0 Hello, After using GISTIC v2.0.23 in genepattern website, I found some unexpacted results. Some deletion peaks showed very significant q-values(4.43E-03~4.31E-08) but there is no significant actual copy number change across all samples. I checked actual copy number change…

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ACastanza/SingleCell.BAM.to.Velocity: Wrapper script for a GenePattern module to create a velocity compatible loom file from single cell bam files

GitHub – ACastanza/SingleCell.BAM.to.Velocity: Wrapper script for a GenePattern module to create a velocity compatible loom file from single cell bam files Files Permalink Failed to load latest commit information. Type Name Latest commit message Commit time About Wrapper script for a GenePattern module to create a velocity compatible loom file…

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GRRDUser Manual [PDF] | Documents Community Sharing

* The preview only display some random pages of manuals. You can download full content via the form below. Microsoft Word Add-In for the GenePattern Reproducible Research Document July 2009 Introduction…………………………………………………………………………………………………………………. 3 About GenePattern…………………………………………………………………………………………………… 3 How GenePattern and the GRRD Add-In Work Together…………………………………………………4 Reproducibility of Document Interactions………………………………………………………………………4 Installing and Uninstalling…

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