Categories
Tag: Impl
rust – Implement partially overlapping traits on polymorphic collection if members all implement trait?
I’ve got an AST structure for IR, and another for Data. Each of these consist of mostly the same types nodes, but each have some nodes which only belong in them. In general IR can contain logical operations like IfThenElse or function application, while Data has to be simpler records….
android studio compiler not works win11 java.lang.IllegalArgumentException
android studio compiler not works win11 java.lang.IllegalArgumentException – Stack Overflow Asked today Viewed 7 times I’m trying compiling app android with android studio but following error appears: java.lang.IllegalArgumentException: Each request requires the same not null build mode to be set at com.android.tools.idea.gradle.project.build.invoker.GradleBuildInvokerImpl.executeAssembleTasks(GradleBuildInvokerImpl.kt:166) at com.android.tools.idea.gradle.project.build.invoker.GradleBuildInvokerImpl.assemble(GradleBuildInvokerImpl.kt:212) at com.android.tools.idea.gradle.project.build.invoker.GradleBuildInvokerImpl.assemble(GradleBuildInvokerImpl.kt:206) at com.android.tools.idea.gradle.actions.MakeGradleProjectAction.doPerform(MakeGradleProjectAction.java:46) at com.android.tools.idea.gradle.actions.AndroidStudioGradleAction.actionPerformed(AndroidStudioGradleAction.java:63)…
java – Ending requests gracefully with Vert.x openapi
I am using vertx-web-openapi version 4.2.4, and I ran into a situation where one of my services ran out of resources due to misconfiguration on the operational side. Due to that, some requests managed to end, and others did not. My Vert.x Router has a RootHandler which adds ACCESS logs…
Wall simulations with GPU – User discussions
stephan December 13, 2023, 4:46am 1 GROMACS version: 2022.3GROMACS modification: No Dear all, I want to run a simulation with two repulsive walls to keep the system finite in z while having non-periodic boundary conditions in that dimension.Everything works fine except when offloading bonding interactions to the GPU. I think…
encounter fatal error when opening Rstudio IDE – RStudio IDE
hello~ I’ve been seeing fatal error warning whenever I try to open Rstudio.The warning are as follows: R Session Startup Failure Report RStudio Version RStudio 2023.06.1+524 “Mountain Hydrangea ” (547dcf86, 2023-07-06) for macOS Mozilla/5.0 (Macintosh; Intel Mac OS X 10_15_7) AppleWebKit/537.36 (KHTML, like Gecko) RStudio/2023.06.1+524 Chrome/110.0.5481.208 Electron/23.3.0 Safari/537.36 Error message…
ncs v2.5.0 linker error when setting CONFIG_BOOTLOADER_MCUBOOT – Nordic Q&A – Nordic DevZone
Hello, I currently have an app using nRF Connect SDK v2.5.0. To enable FOTA I set CONFIG_NCS_SAMPLE_MCUMGR_BT_OTA_DFU and CONFIG_BOOTLOADER_MCUBOOT in my prj.conf (following the documentation instructions). After this building the app fails during linking for 3 different undefined references: [275/280] Linking C executable zephyr/zephyr_pre0.elf FAILED: zephyr/zephyr_pre0.elf zephyr/zephyr_pre0.map : && ccache /home/q/app/zephyr_workspace/toolchains/7795df4459/opt/zephyr-sdk/arm-zephyr-eabi/bin/arm-zephyr-eabi-gcc…
Solved: R-script ggplots broken in Services
We are having the same problem. The reports were working just fine in the services then all of a sudden our R visuals would not show in the PowerBI service. They continue to function on the desktop. Here is the error we are receiving. Script Runtime Error — Attaching…
Noob Errors with GISTIC2
Hello, Shahin here.I am very happy that such a group exists.other than that, just want to thank you to make open source GenePattern, which saves us lots of work and saves lots of time. I am new to Gene analysis and because of that, trying to do a sample project.For…
python – How to solve Internal Server Error when integrating Swagger/OpenAPI
a college student here trying to finish a confusing assignment at 4am. The end goal should be to produce a centralized log server, where different systems can run a python script that sends all kinds of logs to this server. I have to design an API for a centralized server…
python – Creating a pytorch CNN using (non-image) Cytometric data
I am trying to use a CNN from pytorch to analyze cytometric data. The dataset (X) has shape (N, 24) where N is the number of samples. The entire dataset has around 170,000 samples. Each sample (row) has a label (y) which is ‘reference’ or ‘sick’. I converted them to…
modeling – Trouble solving the system of nonlinear differential equations in sage math
I am solving a 9×9 system of ordinary differential equations. In simple terms, I need to get the equilibrium expressions for the system. I am using the solve command in sage, but I get an error whose cause I don’t know. Kindly help. Declare variables “mu_h,beta,alpha,gamma_r,gamma_s,omega,mu_m,epsilon,theta,N_h,S_h,I_hr,I_hs,I_hsr,R_h,N_m,S_m,I_mr,I_ms,I_msr = var(‘mu_h,beta,alpha,gamma_r,gamma_s,omega,mu_m,epsilon,theta,N_h,S_h,I_hr,I_hs,I_hsr,R_h,N_m,S_m,I_mr,I_ms,I_msr’) System of…
Panic: Could not run ‘torchvision::roi_pool’ with arguments from the ‘CUDA’ backend – Jetson Nano
Hi, Team! I have such errors, when I run my code in docker container: root@de87551d73cf:/app/src# ./main WARN[0032] CUDA is valid WARN[0044] CUDA is valid INFO[0044] Forwarding… [W TensorImpl.h:1156] Warning: Named tensors and all their associated APIs are an experimental feature and subject to change. Please do not use them for…
140releng-powerpc64le-quarterly][biology/cytoscape] Failed for cytoscape-3.6.1 in build
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: y…@freebsd.org Log URL: pkg-status.freebsd.org/foul2/data/140releng-powerpc64le-quarterly/84b4661ec108/logs/cytoscape-3.6.1.log Build URL: pkg-status.freebsd.org/foul2/build.html?mastername=140releng-powerpc64le-quarterly&build=84b4661ec108 Log: =>> Building biology/cytoscape build started at Sat Dec 2…
python – Different behavior in the same conda-pytorch env on different GPUs
Want to improve this question? Add details and clarify the problem by editing this post. I have a project that uses conda env with old pytorch version. It works smoothly if I use Nvidia V100, but it won’t run on other GPUs (I’ve tried RTX3080, TeslaA10, RTX2080TI, TeslaA2, TeslaT4) using…
python – Why does pytorch treat network classes like functions?
There’s a few layers to this. First, the pure python layer: Python objects have various dunder methods (double underscore) such as __init__, __repr__, and others. One such method is __call__. If you call a python object like a function, it invokes the __call__ method of the object class. class MyClass…
Nccl_external fails while trying to compile pytroch from source – torch.compile
Hello, I’m trying to compile pytorch from source and encountering the following build error. $ CC=gcc-10 CXX=g++-10 python setup.py develop … [5995/6841] Linking CXX executable bin/HashStoreTest Warning: Unused direct dependencies: /home/netfpga/research/collective/pytorch/build/lib/libc10.so /home/netfpga/anaconda3/envs/pytorch_base/lib/libmkl_intel_lp64.so.1 /home/netfpga/anaconda3/envs/pytorch_base/lib/libmkl_gnu_thread.so.1 /home/netfpga/anaconda3/envs/pytorch_base/lib/libmkl_core.so.1 /lib/x86_64-linux-gnu/libdl.so.2 /home/netfpga/anaconda3/envs/pytorch_base/lib/libgomp.so.1 [5996/6841] Performing build step for ‘nccl_external’ FAILED: nccl_external-prefix/src/nccl_external-stamp/nccl_external-build nccl/lib/libnccl_static.a /home/netfpga/research/collective/pytorch/build/nccl_external-prefix/src/nccl_external-stamp/nccl_external-build /home/netfpga/research/collective/pytorch/build/nccl/lib/libnccl_static.a cd /home/netfpga/research/collective/pytorch/third_party/nccl/nccl &&…
Pytorch 2.1 on slurm – PyTorch Forums
Hello, I upraded my pytorch to 2.1 and there seem to be issues when I am running it on GPU on the slurm cluster I use. File “/storage/home/hcoda1/6/user123/VIT/model_reg_square.py”, line 292, in <module> y_pred = model(x_masked, attn_mask) File “/storage/home/hcoda1/6/user123/.conda/envs/myenv/lib/python3.10/site-packages/torch/nn/modules/module.py”, line 1518, in _wrapped_call_impl return self._call_impl(*args, **kwargs) File “/storage/home/hcoda1/6/user123/.conda/envs/myenv/lib/python3.10/site-packages/torch/nn/modules/module.py”, line 1527, in…
Error in Sonar-Sonic for IntelliJ – IntelliJ Platform
348704954 (348704954) November 14, 2023, 2:06am 1 Environment:*Javaversion=17.0.8.1*Javavendor=JetBrainss.r.o.*OSname=MacOSX*OSarchitecture=x86_64*IDE=IntelliJIDEA2023.2.4*SonarLintversion=1.0.6 ***exceptionclasswaschangedorremoved ExternalToolPass: com.intellij.diagnostic.PluginException:annotator:com.sankuai.waimai.soniclint.intellij.editor.SonarExternalAnnotator@31059657(classcom.sankuai.waimai.soniclint.intellij.editor.SonarExternalAnnotator)[Plugin:com.sankuai.waimai.soniclint.intellij] atcom.intellij.diagnostic.PluginProblemReporterImpl.createPluginExceptionByClass(PluginProblemReporterImpl.java:23) atcom.intellij.diagnostic.PluginException.createByClass(PluginException.java:89) atcom.intellij.codeInsight.daemon.impl.ExternalToolPass.processError(ExternalToolPass.java:251) atcom.intellij.codeInsight.daemon.impl.ExternalToolPass.doApply(ExternalToolPass.java:227) atcom.intellij.codeInsight.daemon.impl.ExternalToolPass.doApply(ExternalToolPass.java:216) atcom.intellij.codeInsight.daemon.impl.ExternalToolPass$1.lambda$run$1(ExternalToolPass.java:168) atcom.intellij.openapi.application.ReadAction.lambda$run$1(ReadAction.java:64) atcom.intellij.openapi.application.impl.ApplicationImpl.runReadAction(ApplicationImpl.java:923) atcom.intellij.openapi.application.ReadAction.compute(ReadAction.java:76) atcom.intellij.openapi.application.ReadAction.run(ReadAction.java:63) atcom.intellij.codeInsight.daemon.impl.ExternalToolPass$1.lambda$run$2(ExternalToolPass.java:165) atcom.intellij.openapi.progress.impl.CoreProgressManager.lambda$runProcess$2(CoreProgressManager.java:186) atcom.intellij.openapi.progress.impl.CoreProgressManager.lambda$executeProcessUnderProgress$13(CoreProgressManager.java:604) atcom.intellij.openapi.progress.impl.CoreProgressManager.registerIndicatorAndRun(CoreProgressManager.java:679) atcom.intellij.openapi.progress.impl.CoreProgressManager.computeUnderProgress(CoreProgressManager.java:635) atcom.intellij.openapi.progress.impl.CoreProgressManager.executeProcessUnderProgress(CoreProgressManager.java:603) atcom.intellij.openapi.progress.impl.ProgressManagerImpl.executeProcessUnderProgress(ProgressManagerImpl.java:61) atcom.intellij.openapi.progress.impl.CoreProgressManager.runProcess(CoreProgressManager.java:173) atcom.intellij.openapi.progress.util.BackgroundTaskUtil.runUnderDisposeAwareIndicator(BackgroundTaskUtil.java:360) atcom.intellij.codeInsight.daemon.impl.ExternalToolPass$1.run(ExternalToolPass.java:162) atcom.intellij.util.ui.update.Update.runUpdate(Update.java:114) atcom.intellij.util.ui.update.MergingUpdateQueue.execute(MergingUpdateQueue.java:348) atcom.intellij.util.ui.update.MergingUpdateQueue.execute(MergingUpdateQueue.java:338) atcom.intellij.util.ui.update.MergingUpdateQueue.doFlush(MergingUpdateQueue.java:295) atcom.intellij.util.ui.update.MergingUpdateQueue.flush(MergingUpdateQueue.java:277) atcom.intellij.util.ui.update.MergingUpdateQueue.run(MergingUpdateQueue.java:246) atcom.intellij.util.concurrency.QueueProcessor.runSafely(QueueProcessor.java:254) atcom.intellij.util.Alarm$Request.runSafely(Alarm.java:373) atcom.intellij.util.Alarm$Request.run(Alarm.java:360) atcom.intellij.util.concurrency.Propagation.contextAwareCallable$lambda$2(propagation.kt:328) atjava.base/java.util.concurrent.FutureTask.run(FutureTask.java:264) atcom.intellij.util.concurrency.SchedulingWrapper$MyScheduledFutureTask.run(SchedulingWrapper.java:272) Colin (Colin) November 14, 2023, 3:19pm 2…
How to include port number into the local routes for “open_api_spex” library? – Questions / Help
defmodule MyAppWeb.MyApi.ApiSpec do alias OpenApiSpex.{Components, Info, OpenApi, Paths, Server} @behaviour OpenApi @impl OpenApi def spec do %OpenApiSpex.OpenApi{ servers: [ OpenApiSpex.Server.from_endpoint(MyAppWeb.Endpoint) ], info: %Info{ title: “API”, version: “1.0” }, paths: Paths.from_router(MyAppWeb.Router), components: %Components{ securitySchemes: %{ “bearer_auth” => %OpenApiSpex.SecurityScheme{ type: “apiKey”, name: “Authorization”, in: “header”, # TODO # scheme: “Bearer”, # description:…
python – Docker with Rstudio & conda virtual env – unable to load R packages
I have this dockerfile: # Use the rocker/rstudio image with R version 4.1.2 FROM rocker/rstudio:4.1.2 # Install deps RUN apt-get update && apt-get install -y \ wget \ bzip2 \ bash-completion \ libxml2-dev \ zlib1g-dev \ libxtst6 \ libxt6 \ libhdf5-dev \ libcurl4-openssl-dev \ libssl-dev \ libfontconfig1-dev \ libcairo2-dev \…
Read file with the DSSAT R package – rstudio
Good evening All,I am trying to read experimental file from my system using the DSSAT R package and I get the following error below: I don’t know if there is any expert here that can help me; Here is my reprex: # Load Required Packages library(DSSAT) #> When using the…
MATH 2- Lab 06 – Kernel: SageMath . In [0]: In [1]: In [4]: -Infinity In [6]: In [7]: -alog(a) + a
Kernel: SageMath . In [0]: In [1]: In [4]: -Infinity In [6]: In [7]: -alog(a) + a + 5log(5) – 5 In [8]: 5*log(5) – 5 In [0]: In [9]: [a > 0, a < 1] In [10]: EXAMPLE 1 plot(ln(x),xmin= 0 ,xmax= 5 ) Out[1]: limit(ln(x),x= 0 ,dir="+") Out[4]:…
How to solve error when annotating cell type with CellAssign
I want to use CellAssign to annotate scRNA-seq data, but I faced the error and I don’t know how to solve it. Could anyone help me? This is my code: rowdata <- rownames(N_data) coldata <- colnames(N_data) sce <- SingleCellExperiment(assays = list(counts = as.matrix(N_data)),colData = coldata,rowData = rowdata) sce <- computeSumFactors(sce)…
Unable to generate a POST endpoint in Micronaut from OpenAPI
I am trying to use openapi-generator with Micronaut but the build fails with: warning: Error: Cannot invoke “String.equals(Object)” because the return value of “io.swagger.v3.oas.models.parameters.Parameter.getIn()” is null java.lang.NullPointerException: Cannot invoke “String.equals(Object)” because the return value of “io.swagger.v3.oas.models.parameters.Parameter.getIn()” is null at io.micronaut.openapi.visitor.SchemaUtils.mergeOperations(SchemaUtils.java:324) at io.micronaut.openapi.visitor.OpenApiApplicationVisitor.mergeMicronautEndpointInfos(OpenApiApplicationVisitor.java:734) at io.micronaut.openapi.visitor.OpenApiApplicationVisitor.finish(OpenApiApplicationVisitor.java:504) at io.micronaut.annotation.processing.TypeElementVisitorProcessor.process(TypeElementVisitorProcessor.java:289) at org.gradle.api.internal.tasks.compile.processing.DelegatingProcessor.process(DelegatingProcessor.java:62) at org.gradle.api.internal.tasks.compile.processing.DynamicProcessor.process(DynamicProcessor.java:52)…
python – Pytorch: CUDA error: invalid configuration argument
I am attempting to run some third-party Pytorch code, and am seeing the following error: File “D:\Testing\OFFLINE\PSFM\particle-sfm\motion_seg\core\network\traj_oa_depth.py”, line 48, in extract_feature output_feat = self.transformer_model(input_traj, input_traj, \ File “C:\Users\B\AppData\Local\Programs\Python\Python39\lib\site-packages\torch\nn\modules\module.py”, line 1501, in _call_impl return forward_call(*args, **kwargs) File “C:\Users\B\AppData\Local\Programs\Python\Python39\lib\site-packages\torch\nn\modules\transformer.py”, line 146, in forward output = self.decoder(tgt, memory, tgt_mask=tgt_mask, memory_mask=memory_mask, File “C:\Users\B\AppData\Local\Programs\Python\Python39\lib\site-packages\torch\nn\modules\module.py”, line…
JupyterHub redirect loop unknown version using SwarmSpawner – JupyterHub
I am attempting to configure JupyterHub with a SwarmSpawner, and I would like to get a functioning server that properly connects to the notebook swarm docker instances it launches. Upon accessing the URL of the JupyterHub server at the default port 8081 and spawning the image, the URL alternates between…
Jupyterhub helm chart 3.1.0+k8s 1.27.6: User pods not spawning got TimeoutError – Zero to JupyterHub on Kubernetes
Context k8s: v1.27.6helm: v3.13.0jupyterhub helm chart: 3.1.0 # configs.yaml proxy: service: type: NodePort ingress: enabled: true annotations: kubernetes.io/ingress.class: nginx nginx.ingress.kubernetes.io/proxy-body-size: 512m cert-manager.io/cluster-issuer: letsencrypt-prod hosts: – xxxxxxxxxxxxxxxxxxxxxxxx tls: – hosts: – xxxxxxxxxxxxxxxxxxxxxxxx secretName: codebook-tls singleuser: startTimeout: 300 debug: enabled: true Deployment seems to work fine: NAME READY STATUS RESTARTS AGE continuous-image-puller-2v74w…
python – how to define a linear function WX+b in pytorch?
I am practicing pytorch. I want to define a linear function Y=WX+B for inputs shape as (3,32,32) and output, the same shape i.e. (3, 32, 32). I defined m network as: class Linear(nn.Module): def __init__(self): super(Linear, self).__init__() # defining the parameters ‘w’ and ‘b’ w = torch.empty((batch_size, 3, 32, 32…
python – Problem with running a PyTorch code that uses multiprocessing to run on GPU
I’d like to convert the code to run on GPU and Cuda. Currently, the code uses torch.multiprocessing module to run on multiple processors. I read the tutorial in here, here and here and tried to send the policy network to cude: torch.set_default_tensor_type(‘torch.cuda.DoubleTensor’) device = torch.device(“cuda”) policy_net.to(device) But I get this…
hiawatha 11.5 – Download, Browsing & More
hiawatha 11.5 – Download, Browsing & More | Fossies Archive “Fossies” – the Fresh Open Source Software Archive Contents of hiawatha-11.5.tar.gz (13 Oct 15:08, 1852032 Bytes) About: Hiawatha is a webserver with a focus on security (optimized for usage with PHP). Fossies downloads: / linux / www / hiawatha-11.5.tar.gz (tar.bz2|tar.xz|zip) Fossies services:…
installation issue with qiime2-shotgun-2023.9 – Technical Support
I have experienced installation issue with qiime2-shotgun-2023.9please help me to resolve this issue.Collecting package metadata (repodata.json): doneSolving environment: failed ResolvePackageNotFound: gxx_impl_linux-64=13.2.0 libgomp=13.2.0 bracken=2.9 xcb-util-image=0.4.0 keyutils=1.6.1 xkeyboard-config=2.38 jack=1.9.22 libcups=2.3.3 alsa-lib=1.2.8 libsanitizer=13.2.0 libgcc-devel_linux-64=13.2.0 gfortran_impl_linux-64=13.2.0 attr=2.5.1 libstdcxx-ng=13.2.0 xcb-util=0.4.0 gcc_impl_linux-64=13.2.0 libnsl=2.0.0 libstdcxx-devel_linux-64=13.2.0 xcb-util-wm=0.4.1 libcap=2.66 xcb-util-keysyms=0.4.0 pulseaudio=16.1 libsystemd0=252 xcb-util-renderutil=0.3.9 libxkbcommon=1.5.0 _openmp_mutex=4.5 libgfortran-ng=13.2.0 libgcc-ng=13.2.0 libudev1=253 gridss=2.13.2…
Openapi-generator: How to deal with generated `ApiError`? – help
So we generate a server stub from our OpenAPI spec yaml using openapi-generator. We integrate the generated server code with Axum. Following an excerpt from generating a server of OpenAPI’s pet store example: #[async_trait] impl<C> Api<C> for Server<C> where C: Has<XSpanIdString> + Send + Sync { /// Create a pet…
MACS3 installation
MACS3 installation 1 I am trying to install MACS2/MACS3 in the Ubuntu 20.04 environment. I am having issues I have no idea how to solve (fairly new to this environment and this is my first post!). Using the commands: sudo apt install MACS3 or pip install MACS3 (and for MACS2…
python – Pytorch Multiclass Classification 2D Tensor
I am using torch.nn.CrossEntropyLoss() and it only excepts 1D tensors. I am performing binary classification, which i know can be done, but after reading all the posts on the same topic i can’t seem to get it to work. My data shape is: out.shape = torch.size([1,4]) target.shape = torch.size([1,2]) And…
Gromacs: src/gromacs/utility Directory Reference
Directories directory tests Unit tests for Low-Level Utilities (utility). Files file alignedallocator.cpp Implements AlignedAllocator. file alignedallocator.h Declares allocation policy classes and allocators that are used to make library containers compatible with alignment requirements of particular hardware, e.g. memory operations for SIMD or…
Building LAMMPS for Nvidia GraceHopper nodes – LAMMPS Installation
I am trying to build LAMMPS with Kokkos for HOPPER90. However, I am running compilation errors, with nvc as well as with gcc. With g++13.1.0 I am getting the error: extern _Float32 modff32 (_Float32 __x, _Float32 *__iptr) noexcept (true); extern _Float32 __modff32 (_Float32 __x, _Float32 *__iptr) noexcept (true) __attribute__ ((__nonnull__…
DiffBind dba.count() crash/can’t finish problems
I am using Diffbind for an ATAC-Seq analysis. My peak caller is MACS2, and here is my sample sheet: I run Diffbind with the following codes, but it crashed every time on dba.count . it can finished Computing summits… Recentering peaks… Reads will be counted as Paired-end. But have this…
Getting error when trying to use pytorch 1.12.1 with jetpack version 5.1.1 – Jetson AGX Orin
When I am using Cuda 11.4 with the PyTorch 1.12 model on jetpack 5.1.1, I am getting error …torch::Device device_ = torch::kCUDAif (device_.is_cuda()) {c10::cuda::getCurrentCUDAStream().synchronize();}This runs fine but,const auto inputs =torch::from_blob(working_img.data,{working_img.rows, working_img.cols, 3}, torch::kUInt8).to(device_, torch::kFloat).permute({2, 0, 1}).contiguous();throws error[ERROR] [1696585409.990943029]: Segmentation error: CUDA error: no kernel image is available for execution on…
USER_PROJECT_DENIED error calling Vertex AI from a Firebase Cloud Function with Python SDK
I am trying to load text-bison@001 model from a Firebase Cloud Function using Vertex AI SDK. from firebase_admin import initialize_app, firestore, storage, credentials import openai import os import stripe import vertexai from vertexai.language_models import TextGenerationModel def init_app(): cred = credentials.Certificate(“./serviceAccountKey.json”) initialize_app(cred) vertexai.init(project=”myapp”, location=”us-central1″) model = TextGenerationModel.from_pretrained(“text-bison@001”) return model However, I…
CUDA error: CUBLAS_STATUS_EXECUTION_FAILED when using roberta – nlp
Hi everyone, I’m training a model that uses roberta to encoder sentence. I got an error that is:RuntimeError: CUDA error: CUBLAS_STATUS_EXECUTION_FAILED when calling cublasGemmStridedBatchedExFix( handle, opa, opb, m, n, k, (void*)(&falpha), a, CUDA_R_16F, lda, stridea, b, CUDA_R_16F, ldb, strideb, (void*)(&fbeta), c, CUDA_R_16F, ldc, stridec, num_batches, CUDA_R_32F, CUBLAS_GEMM_DEFAULT_TENSOR_OP) My problem is…
Error with Pytorch Lightning ddp_spawn on SLURM – DDP/GPU
Hi Folks! I’m using Pytorch Lightning to tune hyperparamters. But my training function has issues when run with a SLURM script. The code works fine when I have an interactive shell running, where I execute the commands (see Slurm Workflow below) on each node manually. But when it’s run with…
PyTorch Lightning RuntimeError: Input type (torch.cuda.FloatTensor) and weight type (torch.FloatTensor) should be the same
Hello, I am trying to implement a model using PyTorch Lightning. During the sanity check validation loop (and also in the training loop if I disable the sanity check) I get the following error: RuntimeError: Input type (torch.cuda.FloatTensor) and weight type (torch.FloatTensor) should be the same Full Traceback: Traceback (most…
Troubles launch IGV on Linux(Debian)
Troubles launch IGV on Linux(Debian) 0 I am trying to run IGV on Debian. I have followed this steps wget data.broadinstitute.org/igv/projects/downloads/2.16/IGV_Linux_2.16.2_WithJava.zip unzip IGV_Linux_2.16.2_WithJava.zip My@machine:~/software/IGV_Linux_2.16.2$ ./igv.sh And this is the output I got WARNING: package com.sun.java.swing.plaf.windows not in java.desktop WARNING: package sun.awt.windows not in java.desktop openjdk version “11.0.13” 2021-10-19 OpenJDK Runtime…
python – Training with PyTorch fails when using 2 GPUs
I’m using a model named Feature-Tokenizer Transformer that was written in PyTorch. I’m running several experiments on a tabular dataset, and until now everything was working fine. But while doing an ablation study (removing some features to check the performance of the model), my jobs were suddenly crashing when I…
Build pytorch with vulkan backend – Mobile
Python: 3.8CUDA: 11.7 I want to compile the pytorch from source with vulkan backend.First install vulkan SDK. Success.Then build the pytorch with vulkan backend: USE_VULKAN=1 USE_VULKAN_SHADERC_RUNTIME=1 USE_VULKAN_WRAPPER=0 python setup.py install Then face the problem: [ 70%] Building CXX object caffe2/CMakeFiles/torch_cpu.dir//aten/src/ATen/metal/Context.cpp.o/home/wbk/code/pytorch/aten/src/ATen/native/vulkan/impl/Registry.cpp: In function ‘const at::native::vulkan::api::ShaderInfo& at::native::vulkan::look_up_shader_info(const string&)’:/home/wbk/code/pytorch/aten/src/ATen/native/vulkan/impl/Registry.cpp:36:27: error: loop variable ‘key’…
Index of /~birch/birchhomedir/dat/mGDE/GDEHELP-osx-x86_64/local/java/seahawk/com/hp/hpl/jena/rdf/arp/impl
Name Last modified Size Description Parent Directory – ANode.class 2009-08-28 15:16 162 ARPSaxErrorHandler.class 2009-08-28 15:16 1.1K ARPString.class 2009-08-28 15:16 1.8K AResourceInternal.class 2009-08-28 15:16 289 AbsXMLContext.class 2009-08-28 15:16 6.1K AttributeLexer.class 2009-08-28 15:16 5.4K CharacterModel.class 2009-08-28 15:16 1.7K DefaultErrorHandler.class 2009-08-28 15:16 1.3K …
boost/regex/v4/regex_token_iterator.hpp – 1.76.0
boost/regex/v4/regex_token_iterator.hpp /* * * Copyright (c) 2003 * John Maddock * * Use, modification and distribution are subject to the * Boost Software License, Version 1.0. (See accompanying file * LICENSE_1_0.txt or copy at www.boost.org/LICENSE_1_0.txt) * */ /* * LOCATION: see www.boost.org for most recent version. * FILE regex_token_iterator.hpp *…
Rstudio not opening anymore – RStudio IDE
Hi all, i opened Rstudio this morning and its crashing since then. I have tried everything recommended: Reinstall R, Reinstall Rstudio, deleting workspaces .R files. Due to the log files i suspect it has something to do with the graphics engine as in the logs are issues with Chrome /…
IntelliJ Startup failure:com.intellij.openapi.fileEditor.impl.PsiAwareFileEditorManagerImpl – Support
Hi!For some days now, I cannot get rid of this IDE error.Maybe anyone had this, too?BrHP Unhandled exception in [CoroutineName(com.intellij.openapi.fileEditor.impl.PsiAwareFileEditorManagerImpl), StandaloneCoroutine{Cancelling}@686879fd, Dispatchers.Default] com.intellij.openapi.diagnostic.RuntimeExceptionWithAttachments: Access is allowed from write thread only; see General Threading Rules | IntelliJ Platform Plugin SDK for detailsCurrent thread: Thread[DefaultDispatcher-worker-59,5,main] 1659764074 (EventQueue.isDispatchThread()=false)SystemEventQueueThread: Thread[AWT-EventQueue-0,6,main] 659797478at com.intellij.openapi.application.impl.ApplicationImpl.createThreadAccessException(ApplicationImpl.java:1083)at com.intellij.openapi.application.impl.ApplicationImpl.throwThreadAccessException(ApplicationImpl.java:1078)at com.intellij.openapi.application.impl.ApplicationImpl.assertWriteIntentLockAcquired(ApplicationImpl.java:1096)at…
TAO 5.0 Classification (PyTorch) deploy error – TAO Toolkit
Please provide the following information when requesting support. • Hardware (RTX A6000)• Network Type (Classification) I followed the tutorial Image Classification PyT to generate the ONNX model file, and then deployed to deepstream according to the tutorial Deploying to DeepStream for Classification TF1/TF2/PyTorch, and I got the following error when…
OpenApi in utoipa – Rust
pub trait OpenApi { // Required method fn openapi() -> OpenApi; } Expand description Trait for implementing OpenAPI specification in Rust. This trait is derivable and can be used with #[derive] attribute. The derived implementation will use Cargo provided environment variables to implement the default information. For a details of…
DockerSpawner breaks with 302 response from unmodified jupyterhub/jupyterhub-deploy-docker.git repo – JupyterHub
Hi JupyterHub community, I am trying to deploy JupyterHub with DockerSpawner to a fresh Ubuntu 22 LTS VM, however I am running into problems. Can someone give me a pointer to how I may debug this? Should I file an issue with the jupyterhub Github repo, or might it be…
Jupyterhub 4.0.x with jupyter-collaboration – JupyterHub
Hi, Did anyone have success of using the latest Jupyterhub with jupyter-collaboration extension? For some reason I get WebSocket errors when trying to use the server link with a token in a private browser window. This worked previously with Jupyterhub 3.1.1. Here a quick test: Dockerfile: FROM jupyter/minimal-notebook:hub-4.0.2 RUN pip…
Gromacs: gmx::internal::OptionSectionImpl::Group Class Reference
#include <gromacs/options/options_impl.h> This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead. [legend] This browser is not able to show SVG: try Firefox, Chrome, Safari, or Opera instead. [legend] Describes a group of options (see Options::addGroup()). Creates a subgroup of options within the current options….
Gromacs: gmx::ITopologyProvider Class Reference
Inherited by gmx::TrajectoryAnalysisRunnerCommon::Impl. Provides topology information to SelectionOptionBehavior. Modules that use SelectionOptionBehavior need to implement this interface to provide functionality to load topology information for use with the selections. If future need arises to use similar information elsewhere, this can be moved to, e.g., the topology module, but for now…
Gromacs: gmx::UpdateConstrainGpu::Impl Class Reference
#include <gromacs/mdlib/update_constrain_gpu_impl.h> Class with interfaces and data for GPU version of Update-Constraint. Impl (const t_inputrec &ir, const gmx_mtop_t &mtop, const DeviceContext &deviceContext, const DeviceStream &deviceStream, GpuEventSynchronizer *xUpdatedOnDevice, gmx_wallcycle *wcycle) Create Update-Constrain object. More… void integrate (GpuEventSynchronizer *fReadyOnDevice, real dt, bool updateVelocities, bool computeVirial, tensor virial, bool doTemperatureScaling,…
On input arguments to dispatch stub
In am trying to understand how a operator works in pytorch – from the frontend to backend and I was tracing back the code for index operator. There is this line: github.com pytorch/pytorch/blob/68cb854d73458a14684d584c25c22b17eb79dfca/aten/src/ATen/native/TensorAdvancedIndexing.cpp#L616-L621 TORCH_IMPL_FUNC(index_out) (const Tensor& self, DimVector sizes, DimVector strides, const Tensor& result) { index_stub(device_type(), *this, sizes, strides); and…
openapi – Is there a way using swagger to auto generate the error responses for APIs developed using SAP CAP
I have included cds-swagger-ui-express within my application to auto-generate the openAPI documentation as well as host it from the server itself. I was looking for a way to auto-generate the error response documentation by swagger itself. Below is my code with the existing document that is generated // srv/todo-service.js const…
jannovar download problem
jannovar download problem 0 I am trying to convert some HGVS to chrom:pos:ref:alt format. I was thinking to use jannovar. As per the documentation I run: jannovar download -d hg19/refseq which gives me this: Options JannovarDownloadOptions [downloadDir=data, getDataSourceFiles()=[bundle:///default_sources.ini], isReportProgress()=true, getHttpProxy()=null, getHttpsProxy()=null, getFtpProxy()=null, geneIdentifiers=[], outputFile=] Downloading/parsing for data source “hg19/refseq” INFO…
RuntimeError: CUDA error: device-side assert triggered, LayoutLM Fine-Tuning – nlp
I am trying to run LayoutLM, with the following arguments: ! CUDA_LAUNCH_BLOCKING=1 python run_seq_labeling.py \ –data_dir “{dataset_dir}” \ –labels “{label_file}” \ –model_name_or_path “{pretrained_model_folder_input}” \ –model_type layoutlm \ –max_seq_length 512\ –do_lower_case \ –do_train \ –num_train_epochs 1 \ –logging_steps 50 \ –save_steps -1 \ –output_dir /kaggle/working/output \ –overwrite_output_dir \ –per_gpu_train_batch_size 8 \…
Gromacs: gmx::PmePpCommGpu::Impl Class Reference
#include <gromacs/ewald/pme_pp_comm_gpu_impl.h> Class with interfaces and data for CUDA version of PME-PP Communication. Impl class stub. Impl (MPI_Comm comm, int pmeRank, const DeviceContext &deviceContext, const DeviceStream &deviceStream) Creates PME-PP GPU communication object. More… void reinit (int size) Perform steps required when buffer size changes. More… …
Channels mismatch in Conv1D – PyTorch Forums
Hi, dear community. I’m fairly new in the field of M.L. and I’m trying to build a 1D autoencoder. My data consist of 100 rows with 21 columns. In this scenario, each row is an individual sample. My goal is to create a 1D autoencoder able to map these lines…
GATK not working when clone to VM
GATK not working when clone to VM 0 I has successfully installed gatk for a long time on my computer. Now I got a workstation and cloning it to ubuntu server VM. However, when run the testing with MarkDuplicatesSpark it does not worked like on my computer. This is the…
How to skip the generation of factory and implementation classes when using openapi-generator?
I am using OpenApi generator version 6.6.0 but working with the Gradle generator plugin.I am using the jaxrs-jersey server generator have looked through the documentation for a way to turn off generation of the factory (*Factory.java) and implementation (*Impl.java) classes but can not find anything in the documentation to achieve…
How to perform Distributed training with PyTorch and Azure ML?
I am trying to run this train.py to train the model on a GPU cluster with one instance node and 4 GPUs. But, every time it gives me the error of CUDA out of memory. Can someone please help me address this issue? Here’s my train.py code- # A. Specify…
Subject:[QIIME2.2023.5] Need help with Qiime2 installation: ResolvePackageNotFound error – Technical Support
Subject: Need help with Qiime2 installation: ResolvePackageNotFound error Dear Qiime2 Community, I hope this message finds you well. I am currently facing an issue during the installation of Qiime2 and would greatly appreciate your assistance in resolving it. During the installation process, after following the Qiime2 instructions, I encountered the…
Notebook spawned in Yarn but killed after timeout – JupyterHub
Hi, I am trying to set up JupyterHub with YarnSpawner against a Hadoop cluster. I’m seeing a peculiar failure in which the notebook is spawned and successfully begins running, at least one activity message is sent back to the Hub (received and logged), but the Hub still times out waiting…
Bizarre docker inference run error, requesting feedback
Traceback and dockerfile is below. I cannot figure out what possibly could be causing this, and I’m not sure whether to report issue to moby(docker) or pytorch: previous docker build ran just fine 3 models are used in the pipeline (human pose estimation) I made minor trivial edits to some…
Error in SonarLint for IntelliJ on Start Up – IntelliJ Platform
Peace (Armin Pies) June 26, 2023, 11:59am 1 Environment: Java: JetBrains s.r.o. 17.0.7 OS: Linux amd64 IDE: CLion 2023.1.4 SonarLint: 8.3.0.71062 java.lang.NumberFormatException: For input string: “” at java.base/java.lang.NumberFormatException.forInputString(NumberFormatException.java:67) at java.base/java.lang.Integer.parseInt(Integer.java:678) at java.base/java.lang.Integer.parseInt(Integer.java:786) at org.sonarsource.sonarlint.core.commons.Version.<init>(Version.java:44) at org.sonarsource.sonarlint.core.commons.Version.create(Version.java:139) at org.sonarsource.sonarlint.core.serverconnection.storage.ServerInfoStorage.adapt(ServerInfoStorage.java:61) at org.sonarsource.sonarlint.core.serverconnection.storage.ServerInfoStorage.lambda$read$1(ServerInfoStorage.java:53) at org.sonarsource.sonarlint.core.serverconnection.storage.RWLock.read(RWLock.java:32) at org.sonarsource.sonarlint.core.serverconnection.storage.ServerInfoStorage.read(ServerInfoStorage.java:53) at org.sonarsource.sonarlint.core.hotspot.HotspotServiceImpl.isLocalDetectionSupported(HotspotServiceImpl.java:170) at org.sonarsource.sonarlint.core.hotspot.HotspotServiceImpl.checkLocalDetectionSupported(HotspotServiceImpl.java:110) at org.sonarlint.intellij.core.BackendService.checkLocalSecurityHotspotDetectionSupported(BackendService.kt:295)…
install SCP problem
install SCP problem 0 Good afternoon, I meet a problem to install SCP. When I install the required package RcppEigen, I encountered following problem. Installing RcppEigen … Traceback (most recent calls last): 16: renv::install(“RcppEigen”) 15: renv_install_impl(records) 14: renv_install_staged(records) 13: renv_install_default(records) 12: handler(package, renv_install_package(record)) 11: renv_install_package(record) 10: withCallingHandlers(renv_install_package_impl(record), error = function(e)…
Examples with FileEditorManagerImpl – com.intellij.openapi.fileEditor.impl.FileEditorManagerImpl
FileEditorManagerImpl (com.intellij.openapi.fileEditor.impl.FileEditorManagerImpl)11 FileEditorManager (com.intellij.openapi.fileEditor.FileEditorManager)4 VirtualFile (com.intellij.openapi.vfs.VirtualFile)4 EditorsSplitters (com.intellij.openapi.fileEditor.impl.EditorsSplitters)3 Project (com.intellij.openapi.project.Project)3 Editor (com.intellij.openapi.editor.Editor)2 FileEditor (com.intellij.openapi.fileEditor.FileEditor)2 XSourcePosition (com.intellij.xdebugger.XSourcePosition)2 NotNull (org.jetbrains.annotations.NotNull)2 IAndroidTarget (com.android.sdklib.IAndroidTarget)1 HprofEditor (com.android.tools.idea.editors.hprof.HprofEditor)1 IntentionActionProvider (com.intellij.codeInsight.intention.IntentionActionProvider)1 IntentionActionWithOptions (com.intellij.codeInsight.intention.IntentionActionWithOptions)1 OpenFileHyperlinkInfo (com.intellij.execution.filters.OpenFileHyperlinkInfo)1 StructureViewComponent (com.intellij.ide.structureView.newStructureView.StructureViewComponent)1 ComponentManagerImpl (com.intellij.openapi.components.impl.ComponentManagerImpl)1 FileDocumentManager (com.intellij.openapi.fileEditor.FileDocumentManager)1 OpenFileDescriptor (com.intellij.openapi.fileEditor.OpenFileDescriptor)1 TextEditor (com.intellij.openapi.fileEditor.TextEditor)1 EditorWindow (com.intellij.openapi.fileEditor.impl.EditorWindow)1 Read more here: Source link
saturn-python-rapids | Saturn Cloud
2022.01.06 Last updated: 2022-05-16 22:42:30 Package Version Channel _libgcc_mutex 0.1 conda-forge _openmp_mutex 4.5 conda-forge abseil-cpp 20210324.1 conda-forge aiobotocore 2.1.0 conda-forge aiohttp 3.8.1 conda-forge aioitertools 0.10.0 conda-forge aiosignal 1.2.0 conda-forge alsa-lib 1.2.3.2 conda-forge anyio 3.6.1 conda-forge appdirs 1.4.4 conda-forge argon2-cffi 21.3.0 conda-forge argon2-cffi-bindings 21.2.0 conda-forge arrow-cpp 1.0.1 conda-forge arrow-cpp-proc 3.0.0 conda-forge…
org.intellij.lang.xpath.xslt.associations.impl.AddAssociationAction.java Source code
Introduction Here is the source code for org.intellij.lang.xpath.xslt.associations.impl.AddAssociationAction.java Source /* * Copyright 2005 Sascha Weinreuter * * Licensed under the Apache License, Version 2.0 (the “License”); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at *…
Examples with ActionToolbarImpl – com.intellij.openapi.actionSystem.impl.ActionToolbarImpl
private void layoutMonitor(@NotNull final JComponent monitorComponent, @NotNull ActionGroup actions, @NotNull BaseMonitorView monitor, int titleSize) { // Set a minimum size on the monitorComponent so that it doesn’t squish when the container is made small. monitorComponent.setMinimumSize(new Dimension(100, 100)); monitorComponent.setPreferredSize(new Dimension(Integer.MAX_VALUE, 100)); int toolbarIndex = getToolbarIndex(monitor); assert toolbarIndex == getComponentCount(); final int…
Examples with Keymap – com.intellij.openapi.keymap.Keymap
Keymap (com.intellij.openapi.keymap.Keymap)48 Shortcut (com.intellij.openapi.actionSystem.Shortcut)14 KeymapManagerEx (com.intellij.openapi.keymap.ex.KeymapManagerEx)10 NotNull (org.jetbrains.annotations.NotNull)10 KeyboardShortcut (com.intellij.openapi.actionSystem.KeyboardShortcut)7 Nullable (org.jetbrains.annotations.Nullable)7 AnAction (com.intellij.openapi.actionSystem.AnAction)6 KeymapManager (com.intellij.openapi.keymap.KeymapManager)6 ActionManager (com.intellij.openapi.actionSystem.ActionManager)4 MacOSDefaultKeymap (com.intellij.openapi.keymap.impl.MacOSDefaultKeymap)4 Pair (com.intellij.openapi.util.Pair)4 FactoryMap (com.intellij.util.containers.FactoryMap)4 THashMap (gnu.trove.THashMap)4 THashSet (gnu.trove.THashSet)4 NonNls (org.jetbrains.annotations.NonNls)3 DefaultKeymap (com.intellij.openapi.keymap.impl.DefaultKeymap)2 KeymapImpl (com.intellij.openapi.keymap.impl.KeymapImpl)2 KeymapManagerImpl (com.intellij.openapi.keymap.impl.KeymapManagerImpl)2 ToolWindow (com.intellij.openapi.wm.ToolWindow)2 KeyEvent (java.awt.event.KeyEvent)2 Read more here: Source link
Implement OpenAPI for AWS Lambda in Quarkus
About OpenAPI It is a specification that allows to describe REST API in a standard way. The OpenAPI Specification (OAS) defines a standard, programming language-agnostic interface description for REST APIs. This allows both humans and computers to discover and understand the capabilities of a service without requiring access to source code, additional…
machine learning – Multiple parameter hybrid classical-quantum neural network using pytorch and qiskit
I am working with a code for hybrid classical-quantum neural network which can be run on qiskit simulator. I am following the link here [https://learn.qiskit.org/course/ch-applications/hybrid-quantum-classical-neural-networks-with-pytorch-and-qiskit] The example in this link works with a single trainable parameter “theta” in the quantum circuit. However, I want multiple parameters in the quantum circuit….
boost/regex/v4/regex_token_iterator.hpp – 1.79.0
boost/regex/v4/regex_token_iterator.hpp /* * * Copyright (c) 2003 * John Maddock * * Use, modification and distribution are subject to the * Boost Software License, Version 1.0. (See accompanying file * LICENSE_1_0.txt or copy at www.boost.org/LICENSE_1_0.txt) * */ /* * LOCATION: see www.boost.org for most recent version. * FILE regex_token_iterator.hpp *…
Gromacs: gmx::SimdDIBool Class Reference
#include <gromacs/simd/impl_reference/impl_reference_simd_double.h> Boolean type for integer datatypes corresponding to double SIMD. Available if GMX_SIMD_HAVE_DINT32_ARITHMETICS is 1. Note This variable cannot be placed inside other structures or classes, since some compilers (including at least clang-3.7) appear to lose the alignment. This is likely particularly severe when allocating such memory on the…
python – Pytorch-Scarf package RuntimeError: Expected all tensors to be on the same device, but found at least two devices, cuda:0 and cpu
RuntimeError: Expected all tensors to be on the same device, but found at least two devices, cuda:0 and cpu! This comes when I run the example notebook from this github repo. Here is the code: batch_size = 128 epochs = 1000 device = torch.device(“cuda” if torch.cuda.is_available() else “cpu”) train_loader =…
Import torch gives Segmentation fault on Jetson Orin Nano – Jetson Nano
Hi.I’m having troubles with torch on my Jetson Orin NanoWhen I try to import it in python the interpreter crashes.I tried to run it with the fault handler here is the output: python3 -q -X faulthandler >>> import torch Fatal Python error: Segmentation fault Current thread 0x0000ffff8411c010 (most recent call…
h5ad cellxgene to R
I am trying to bring this small dataset (1496 cells, 43MB) from cellxgene. 1 R SeuratDisk h5ad to h5seurat and then to seurat. library(SeuratDisk) SeuratDisk::Convert(“local.h5ad”, dest = “local.h5seurat”, overwrite=TRUE) g <- SeuratDisk::LoadH5Seurat(“local.h5seurat”, meta.data=FALSE, misc=FALSE) Validating h5Seurat file Initializing RNA with data Adding counts for RNA Adding feature-level metadata for RNA…
Jupyterhub deployment on k8s 1.27 – Zero to JupyterHub on Kubernetes
viral May 31, 2023, 3:37am 1 Hello! I am trying to deploy Jupyterhub 2.0.0 helm chart on k8s version 1.27.2 inside minikube VM. When trying to deploy the helm chart locally, I get the following error on hub pod (after this pod keeps on restarting with the same error): Loading…
PhpStorm 2021.1: exception Cannot create configurable
com.intellij.diagnostic.PluginException: Cannot create class de.espend.idea.php.toolbox.ui.application.ToolboxApplicationForm (classloader=PluginClassLoader(plugin=PluginDescriptor(name=PHP Toolbox, id=de.espend.idea.php.toolbox, descriptorPath=plugin.xml, path=~/Library/Application Support/JetBrains/Toolbox/apps/PhpStorm/ch-0/211.6693.120/PhpStorm.app.plugins/PHP Toolbox, version=5.1.1, package=null), packagePrefix=null, instanceId=60, state=active)) at com.intellij.serviceContainer.ComponentManagerImpl.instantiateClass(ComponentManagerImpl.kt:763) at com.intellij.serviceContainer.ComponentManagerImpl.instantiateClass(ComponentManagerImpl.kt:781) at com.intellij.openapi.options.ConfigurableEP$ClassProducer.createElement(ConfigurableEP.java:440) at com.intellij.openapi.options.ConfigurableEP.createConfigurable(ConfigurableEP.java:346) at com.intellij.openapi.options.ex.ConfigurableWrapper.createConfigurable(ConfigurableWrapper.java:42) at com.intellij.openapi.options.ex.ConfigurableWrapper.getConfigurable(ConfigurableWrapper.java:116) at com.intellij.openapi.options.ex.ConfigurableWrapper.cast(ConfigurableWrapper.java:91) at com.intellij.openapi.options.newEditor.SettingsTreeView.findConfigurableProject(SettingsTreeView.java:312) at com.intellij.openapi.options.newEditor.SettingsTreeView$MyRenderer.getTreeCellRendererComponent(SettingsTreeView.java:643) at java.desktop/javax.swing.plaf.basic.BasicTreeUI$NodeDimensionsHandler.getNodeDimensions(BasicTreeUI.java:3155) at java.desktop/javax.swing.tree.AbstractLayoutCache.getNodeDimensions(AbstractLayoutCache.java:493) at java.desktop/javax.swing.tree.VariableHeightLayoutCache$TreeStateNode.updatePreferredSize(VariableHeightLayoutCache.java:1344) at java.desktop/javax.swing.tree.VariableHeightLayoutCache$TreeStateNode.expand(VariableHeightLayoutCache.java:1465) at java.desktop/javax.swing.tree.VariableHeightLayoutCache$TreeStateNode.expand(VariableHeightLayoutCache.java:1272) at java.desktop/javax.swing.tree.VariableHeightLayoutCache.ensurePathIsExpanded(VariableHeightLayoutCache.java:967) at java.desktop/javax.swing.tree.VariableHeightLayoutCache.setExpandedState(VariableHeightLayoutCache.java:181) at…
Integrate a qnode supporting parameter broadcast into a pytorch model – PennyLane Help
Currently, I’m working on a quantum neural network that integrates a Qnode into a PyTorch model. To accelerate the computation, I use the ‘Parameter broadcast’ feature. The device I used is default.qubit. However, it only works when the diff_method is backprop. When use parameter_shift or adjoint, it will throw error…
Compiling GROMACS 2023 with Intel LLVM compilers – User discussions
Erik May 24, 2023, 5:01pm 1 GROMACS version: 2023.1GROMACS modification: No I’m trying to compile GROMACS 2023 using Intel’s LLVM compilers and have run into a number of issues. The first is that they don’t seem to play nicely with nvcc because of a bug with the way nvcc sets…
fix the false linkup in xgbe_phy_status
[PATCH net] amd-xgbe: fix the false linkup in xgbe_phy_status * [PATCH net] amd-xgbe: fix the false linkup in xgbe_phy_status @ 2023-05-24 17:49 Raju Rangoju 0 siblings, 0 replies; only message in thread From: Raju Rangoju @ 2023-05-24 17:49 UTC (permalink / raw) To: netdev Cc: davem, edumazet, kuba, pabeni, Shyam-sundar.S-k,…
Crash if numworkers>0 – Lightning AI
Hello everyone, I’ve got a really weird problem.If I set my num_workers > 0 I get a crash in (or before?) the initial sanity check. The task manager shows that the disk usage is high and the RAM gets nearly completly filled up. I wonder if num_workers>0 somehow causes the…
Torchserve throws 400 `DownloadArchiveException` when the process does not have write access to model store folder
Hello. Recently I installed eks cluster with torchserve following the tutorial github.com/pytorch/serve/tree/master/kubernetes/EKS, but having troubles uploading a motel. When I try to upload a model via: curl -X POST “http://$HOST:8081/models?url=http%3A//54.190.129.247%3A8222/model_ubuntu_2dd0aac04a22d6a0.mar” curl -X POST “http://$HOST:8081/models?url=http://54.190.129.247/8222/model_ubuntu_2dd0aac04a22d6a0.mar” I am getting the following error: { “code”: 400, “type”: “DownloadArchiveException”, “message”: “Failed to download archive…
Crashing when trying to build the app
I am trying to add the app as a module. As I want to make some changes to the code. When I try to build the app. However, it is giving me an error. 2017-01-10 03:53:30,852 [2082900] WARN – nal.AbstractExternalSystemTask – Configuration with name ‘default’ not found. com.intellij.openapi.externalSystem.model.ExternalSystemException: Configuration with…
F_B0. [IMPL] Cifar10 CNN Keras – TypeA – EN – Deep Learning Bible – 2. Classification
Github : github.com/RichardMinsooGo/Bible_2_F_CNN Source Code : B0_Cifar10_CNN_Keras_TypeA.py The baseline code for this implementation is as follows. You can understand it by comparing it with the code below. In the pseudocode below, there are changes only in Line 2 and Line 7. Please see the part marked with red color in…
Error in SonarLint for IntelliJ when opening project and closing that window before it’s fully loade – IntelliJ Platform
Environment: Java: JetBrains s.r.o. 17.0.6 OS: Linux amd64 IDE: IntelliJ IDEA 2023.1.1 SonarLint: 8.2.0.68615 java.lang.RuntimeException: Cannot invoke (class=ModuleChangeListener, method=modulesAdded, topic=ModuleListener) at c.ij.util.messages.impl.MessageBusImplKt.invokeListener(MessageBusImpl.kt:657) at c.ij.util.messages.impl.MessageBusImplKt.deliverMessage(MessageBusImpl.kt:415) at c.ij.util.messages.impl.MessageBusImplKt.pumpWaiting(MessageBusImpl.kt:394) at c.ij.util.messages.impl.MessageBusImplKt.access$pumpWaiting(MessageBusImpl.kt:1) at c.ij.util.messages.impl.MessagePublisher.invoke(MessageBusImpl.kt:454) at jdk.proxy2/jdk.proxy2.$Proxy90.modulesAdded(Unknown Source) at c.ij.workspaceModel.ide.impl.legacyBridge.module.ModuleManagerComponentBridge.fireModulesAdded(ModuleManagerComponentBridge.kt:338) at c.ij.workspaceModel.ide.impl.legacyBridge.module.ModuleManagerComponentBridge.access$fireModulesAdded(ModuleManagerComponentBridge.kt:53) at c.ij.workspaceModel.ide.impl.legacyBridge.module.ModuleManagerComponentBridge$ModuleManagerInitProjectActivity.run(ModuleManagerComponentBridge.kt:61) at c.ij.ide.startup.impl.StartupManagerImpl.runInitProjectActivities(StartupManagerImpl.kt:215) at c.ij.ide.startup.impl.StartupManagerImpl.access$runInitProjectActivities(StartupManagerImpl.kt:69) at c.ij.ide.startup.impl.StartupManagerImpl$initProject$lambda$2$$inlined$useWithScope2$1.invokeSuspend(trace.kt:111) at c.ij.ide.startup.impl.StartupManagerImpl$initProject$lambda$2$$inlined$useWithScope2$1.invoke(trace.kt) 2023-05-16 13:18:07,230 [3126092]…
python – PyTorch: Expected input batch_size (96) to match target batch_size (24)
I tried out PyTorch and wanted to write a program for Gender_Classification. But, I got the error message: Expected input batch_size (96) to match target batch_size (24) I searched for a solution but I don’t understand what’s wrong with my code. class CNN(nn.Module): def __init__(self): super(CNN,self).__init__() self.conv1=nn.Conv2d(in_channels=3,out_channels=64,kernel_size=3,stride=1,padding=1) self.bn1=nn.BatchNorm2d(num_features=64) self.relu1=nn.ReLU() self.pool=nn.MaxPool2d(kernel_size=2)…
Rstudio startup issue “GPU process isn’t usable. Goodbye.” – RStudio IDE
Hi, I have R and R studio installed following RStudio Desktop – Posit ,but I am unsuccessful to start up the Rstudio IDE . The error message is below.This error occurred on two different computers. I have tried the steps in support.posit.co/hc/en-us/articles/200488508-RStudio-Desktop-IDE-Will-Not-Start. Any pointers are welcome. Thanks, Ivo ERROR: The…
RStudio Launcher Plugin SDK: rstudio::launcher_plugins::api::ResourceUtilStreamRequest Class Reference
Inheritance diagram for rstudio::launcher_plugins::api::ResourceUtilStreamRequest: Additional Inherited Members Public Types inherited from rstudio::launcher_plugins::api::Request enum Type { Type::HEARTBEAT = 0, Type::BOOTSTRAP = 1, Type::SUBMIT_JOB = 2, Type::GET_JOB = 3, Type::GET_JOB_STATUS = 4, Type::CONTROL_JOB = 5, Type::GET_JOB_OUTPUT = 6, Type::GET_JOB_RESOURCE_UTIL = 7, Type::GET_JOB_NETWORK = 8, Type::GET_CLUSTER_INFO = 9, Type::INVALID } Static…
Unable to create environment – Technical Support
Tried to create an environment using Conda and was not able to do so. Have copy pasted the message below. Would be grateful to know what the issue is and how to resolve the issue. (base) C:\Users\Mathangi Janakiraman>wget data.qiime2.org/distro/core/qiime2-2023.2-py38-linux-conda.yml–2023-05-11 12:54:47– data.qiime2.org/distro/core/qiime2-2023.2-py38-linux-conda.ymlResolving data.qiime2.org (data.qiime2.org)… 54.200.1.12Connecting to data.qiime2.org (data.qiime2.org)|54.200.1.12|:443… connected.ERROR: cannot verify…
python – PyTorch | Mat1 and mat2 shapes cannot be multiplied for MNIST GANs model
H im using the Mnist data set i build this GANs model and my goal is to calculate nonsaturating loss my batch size is 256 , latent_dim is 100 and number of epochs is 10: # Define the generator network class Generator(nn.Module): def __init__(self, latent_dim, image_size, num_channels,ngpu): super(Generator, self).__init__() self.latent_dim…
Cannot build PyTorch 2.0.0 from source on AGX Xavier – Jetson AGX Xavier
znmeb May 2, 2023, 5:17am 1 I’m trying to build PyTorch 2.0.0 from source on an AGX Xavier running JetPack 5.1.1. This looks to me like a GCC issue, not anything in either PyTorch or JetPack itself: [4974/6104] Building CXX object caffe2/CMakeFiles/torch_cpu.dir/__/torch/csrc/profiler/kineto_client_interface.cpp.o FAILED: caffe2/CMakeFiles/torch_cpu.dir/__/torch/csrc/profiler/kineto_client_interface.cpp.o … /home/znmeb/Projects/AlgoCompSynth-One/JetPack5/Projects/pytorch/torch/csrc/profiler/kineto_client_interface.cpp:25:8: error: ‘void torch::profiler::impl::{anonymous}::LibKinetoClient::warmup(bool)’ marked…
Error when shutting down dataloader2 and readingservice from torchdata – DataModule
Im trying to combine lightning and torchdata using datapipes and dataloader2 but is running into this error when i try to train. I also end up having to kill some left over processes with pkill -9 -f “python src/train.py” I think that the problem is that the teardown doesn’t get…
android – java.lang.IllegalArgumentException: Each request requires the same not null build mode to be set
android – java.lang.IllegalArgumentException: Each request requires the same not null build mode to be set – Stack Overflow …