Tag: InferCNV

BAMboozle removes genetic variation from human sequence data for open data sharing

Strategy for stripping human sequence data of genetic information To lower the barriers in sharing sequence data, we propose, like others recently17, to remove information on genetic variation that could be used to infer the identity from aligned reads and compromises the privacy of the donor (Fig. 1a). Genetic variation, including…

Continue Reading BAMboozle removes genetic variation from human sequence data for open data sharing

InferCNV how to choose the right reference?

InferCNV how to choose the right reference? 1 Hello everyone! Could you help me to choose the correct reference for scRNA data if I need to identify CNVs among the malignant clusters that are represented as immune cells with an epithelial phenotype (CTC). What is more correct to take healthy…

Continue Reading InferCNV how to choose the right reference?