Tag: iNMF

Liger find a sub cluster under one cluster 0 Good morning, I am trying to use liger to find my sub clusters for one cell clusters. However, I got trouble. I noticed that my sub clusters looks like: They are not really clustering. I am trying to use different parameters,…

integrative multiomic data 0 I have to integrate cancer patients cohort data – protein, mRNA, Methylation, mutation profile to identify genes associated with survival. What may be the best strategy. I have looked at iNMF, icluster plus etc, that are based on different methods but could not find out what…