Tag: InterMine

PRESS RELEASE Published May 29, 2023 Bioinformatics Software Market Analysis 2023 | by Product Type ( Knowledge Management Tools, Bioinformatics Platforms, Bioinformatics Services ), Application Type ( Medical bioinformatics, Animal bioinformatics, Agricultural bioinformatics, Scholars and microbial genomes, ), CAGR, Major Key Players are covered in this report by 360 Market…

PRESS RELEASE Published May 5, 2023 Global Bioinformatics Software Market Report – Production and Consumption Professional Analysis (Impact of COVID-19)  , Covid 19 Outbreak Impact research report added by Report Ocean, is an in-depth analysis of market characteristics, size and growth, segmentation, regional and country breakdowns, competitive landscape, market shares,…

Hello, all! It has been a long journey to get here, but I am pleased to report that The Intermine Legacy: I am the Darkness’ Indiegogo Demo is now live for all to enjoy! It is available for Windows PC, Mac OS, and Linux, and we have it on good authority that it’ll…

PRESS RELEASE Published April 24, 2023 Global Bioinformatics Software Market research report offers a detailed analysis of valuable insight into the market state and future predictions until 2030. The report uses both qualitative and quantitative data to highlight key market trends, challenges, competition, industry developments, and emerging opportunities. Additionally, the…

<init> Create a Path object using class constraints from a Map. Unlike the other constructor, the stringPat getEndFieldDescriptor Return the FieldDescriptor of the last element in the path or null if the path has just one element. getLastClassDescriptor Returns the last ClassDescriptor in the path. If the last element is…

Blog:list of old gene name in C. elegans 1 Hi, Gene of C. elegans may have two different names. For instance, WBGene00006993 has two locus name: (1) “zyg-8” and, (2) old/other names “apo-1” (www.wormbase.org/species/c_elegans/gene/WBGene00006993#0-9e-3). I have compiled (1)WB id, (2)locus, and (3)cosmid id of all genes from C. elegans GFF3…

Bioinformatics Software Industry market research report is an expert’s analysis that mainly includes companies, types, applications, regions, countries, etc. Also, the reports give an analysis on sales, revenue, trade, competition, investment, and forecast. Bioinformatics Software Industry market research covers COVID-19 impacts on the upstream, midstream and downstream industries. Also, this…

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Hello, all! I am pleased to present a brand new screenshot in celebration of #ScreenshotSaturday! I won’t lie, a lot has gone down since last week. To start, we’ve revamped the textbox into a more dynamic trapezoid. And every day, our wonderful and incredibly talented artist, A Sleepy Witch’s Atelier,…

I’m trying to get all C. elegans genes from Wormbase programmatically, as well as all of their alternative gene names. To do this, I’m using intermine. I was able to obtain all genes, but not ALL alternative names. The code below retrieves the genes’ primary identifiers, and their “secondary identifiers.”…

Newest ‘intermine’ Questions – Bioinformatics Stack Exchange …

PRESS RELEASE Published March 12, 2023 Latest “Bioinformatics Software Market” Research Report gives statistical analysis on various growth opportunities, future scope, top industry development plans and key regions update with leading players. Some top players Are – Genomespace, InterMine, .NET Bio, GenGIS, PathVisio, GenePattern | 105 Pages Report “Final Report…

JC Market Research recently introduced a new title on Bioinformatics Software Industry Market 2022 and forecast 2031 from its database. The Bioinformatics Software Industry report provides a study with an in-depth overview, describing the product/industry scope and elaborates market outlook and status (2022-2031). The Bioinformatics Software Industry report is curated after in-depth…

generate Converts a Query object into an SQL String. completelyFalse Returns true if this constraint is always false, regardless of row values. constraintSetToString Converts a ConstraintSet object into a String suitable for putting in an SQL query. constraintToString Converts a Constraint object into a String suitable for putting in an…

Introduction Here is the source code for org.intermine.webservice.server.VersionServiceTest.java Source package org.intermine.webservice.server; /* * Copyright (C) 2002-2013 FlyMine * * This code may be freely distributed and modified under the * terms of the GNU Lesser General Public Licence. This should * be distributed with the code. See the LICENSE file…

PRESS RELEASE Published February 14, 2023 The growing demand for Bioinformatics Software has provided a major boost to the Global Bioinformatics Software Market as more people are shifting their preferences to this growing sector. The market is expected to keep rising at a high CAGR and reach values of high…

dest.getClass(), fieldName, source)) { if (type == FROM_DB) { dest.setFieldValue(fieldName, srcObj.getFieldProxy(fieldName)); } else { InterMineObject sourceTarget = (InterMineObject) srcObj.getFieldProxy(fieldName); if (sourceTarget instanceof ProxyReference) { if (idMap.get(sourceTarget.getId()) == null) { target = (InterMineObject) srcObj.getFieldProxy(fieldName); if ((target != null) && (target.getId() != null) && (idMap.get(target.getId()) == null) Read more here: Source link

/** * Return a map containing the logarithm of accesses for each template. The map is obtained * merging the map of logarithm of accesses for single users and the map of logarithm of * accesses for the single sessions * @param userName the user name * @param sessionId the…

InterMine::Model – the representation of an InterMine model use InterMine::Model; my $model_file = ‘flymine/dbmodel/build/model/genomic_model.xml’; my $model = InterMine::Model->new(file => $model_file); my $gene = $model->make_new( Gene => { primaryIdentifier => “FBgn0004053”, secondaryIdentifier => “CG1046”, symbol => “zen”, name => “zerknullt”, length => “3474”, organism => { shortName => “D. melanogaster”, }…

Bioinformatics Software Market Report: 2022-2027 Bioinformatics Software Market (Newly published report) which covers Market Overview, Future Economic Impact, Competition by Manufacturers, Supply (Production), and Consumption Analysis The market research report on the global Bioinformatics Software industry provides a comprehensive study of the various techniques and materials used in the production…

California (United States) – The Bioinformatics Software Market Research Report is a professional asset that provides dynamic and statistical insights into regional and global markets. It includes a comprehensive study of the current scenario to safeguard the trends and prospects of the market. Bioinformatics Software Research reports also track future…

Zenodo DOI Badge DOI 10.5281/zenodo.5827966 Markdown [](https://doi.org/10.5281/zenodo.5827966) reStructedText .. image:: zenodo.org/badge/DOI/10.5281/zenodo.5827966.svg :target: doi.org/10.5281/zenodo.5827966 HTML <a href=”https://doi.org/10.5281/zenodo.5827966″><img src=”https://zenodo.org/badge/DOI/10.5281/zenodo.5827966.svg” alt=”DOI”></a> Image URL zenodo.org/badge/DOI/10.5281/zenodo.5827966.svg Target URL doi.org/10.5281/zenodo.5827966 Read more here: Source link

doi: 10.1093/bioinformatics/btab809. Online ahead of print. Affiliations Expand Affiliations 1 Cancer Computational Biology Center, Erasmus MC Cancer Institute, University Medical Center, Molewaterplein 40, Rotterdam, 3015 GD, the Netherlands. 2 Department of Medical Oncology, Erasmus MC Cancer Institute, University Medical Center, Molewaterplein 40, Rotterdam, 3015 GD, the Netherlands. 3 Department of…

All dependents of day8.re-frame/async-flow-fx – Clojars org.intermine/bluegenes 0.9.10, 0.9.11-SNAPSHOT, 0.9.11-SNAPSHOT1, 0.9.11-SNAPSHOT2, 0.9.11-SNAPSHOT3, 0.9.11, 0.9.12, 0.10.0, 1.0.0-SNAPSHOT, 1.0.0, 1.0.1, 1.1.0, 1.2.0, 1.2.1 intermine/im-tables 0.1.4-SNAPSHOT, 0.1.5-SNAPSHOT, 0.1.6-SNAPSHOT, 0.1.7-SNAPSHOT, 0.1.8-SNAPSHOT, 0.1.9-SNAPSHOT, 0.1.10-SNAPSHOT, 0.1.11-SNAPSHOT, 0.1.12-SNAPSHOT, 0.1.13-SNAPSHOT, 0.1.14-SNAPSHOT district0x 0.1.5, 0.1.6, 0.1.7, 0.1.8, 0.1.10, 0.1.11, 0.1.12, 0.1.13, 0.1.14, 0.1.15, 0.1.16, 0.1.17, 0.1.18, 0.1.19, 0.1.20 aboutstatusprojectscontributenewscontactcodesecurityDMCAhelp…

/** * Loads an InterMineBag from the UserProfile database. * * @param os the production ObjectStore * @param savedBagId the ID of the bag in the userprofile database * @param uosw the ObjectStoreWriter of the userprofile database * @param classDescriptor if true the classDescriptor will be set * @throws UnknownBagTypeException…

@Override public void onRequestSuccess(GetListsRequest.Lists result) { SpiceRequest req = new AppendGenesToListRequest(mBaseActivity, mMine, mBaseActivity.getString(R.string.gene_favorites_list_name), mGenes); mBaseActivity.execute(req, new RequestListener<Void>() { @Override public void onRequestFailure(SpiceException ex) { ResponseHelper.handleSpiceException(ex, mBaseActivity, mMine); } @Override public void onRequestSuccess(Void aVoid) { } }); } Read more here: Source link

public void testHavingConstraintSet() throws Exception { q1 = new Query(“select table1.field1 from table1 group by table1.field1 having (table1.field1 = table1.field2 or table1.field1 = table1.field3)”); q2 = new Query(); Table t1 = new Table(“table1”); Field f1 = new Field(“field1”, t1); Field f2 = new Field(“field2”, t1); Field f3 = new Field(“field3”,…