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Tag: json
Using OIDC and Oauth2 in openapi 3
I hope someone can help me. I have been looking at lots of forums and have not been able to find any answers. I am hoping to use OpenAPI 3 and OIDC to get access token. I am generating a Java client using codegen cli – java -jar swagger-codegen-cli-3.0.8.jar generate…
What’s New in IntelliJ IDEA Ultimate 2023.3
Releases The Ultimate edition of IntelliJ IDEA goes beyond the basics, offering a comprehensive suite of features, including in-depth profiling capabilities, database tools, built-in support for many web and enterprise frameworks, and more. In this latest v2023.3 release, we’ve rolled out a suite of new features to enhance your coding…
Deploying OpenAPI Helm Chart on AWS EKS
To deploy the OpenAPI Helm chart on AWS Elastic Kubernetes Service (EKS), we’ll follow these steps: Create an EKS cluster. Configure Kubeconfig to interact with your cluster. Use the Pulumi Kubernetes provider to deploy the OpenAPI Helm chart using kubernetes.helm.v3.Chart. Before we begin, ensure you have the following prerequisites in…
kotlin – How to set addtionalProperties via OpenAPI 3.0 Java annotations?
My end goal is to simply have some generated OAS 3.0 documentation contain the size constraints on a Map<String, String> ‘s keys and values. This code will be in Kotlin, but it shouldn’t muddle the example too much: @RouterOperation( operation = Operation(operationId = “:POST/foo/bar”, requestBody = RequestBody( content = [Content(…
NetworkAnalyst
Starting from a list of gene IDs with optional expression values Starting from a single count table (RNAseq) or intensity table (microarray) Starting with several gene expression tables for meta-analysis Uploading raw RNAseq files (any species) for mapping & quantification Starting with a network file (sif, graphml, json) News &…
Unlocking API Potential with OpenAPI
Unlocking API Potential with OpenAPI Table of Contents: Introduction What is Open API The Importance of API in Development Spec First API Design Using Open API for Documentation Tools for Generating Documentation Generating SDKs from Open API Specs Benefits of Leading with Open API Specs Examples of Open API Tools…
Problems rendering a quarto qmd file through jupyter in VS Code – JupyterHub
bj631 January 19, 2024, 10:45pm 1 I’m trying to preview a .qmd file using quarto with jupyter in VS Code. There is a little banner in the bottom right corner that shows up when trying to render the .qmd that says ” command ‘quarto.preview’ not found “. It is a…
Creating valid json file for pytorch model – Models
I built a simple clip model using pytorch and uploaded to huggingface manually, I want to use it with transformer library, I added a config json file but when i try to load to model it throws not valid json file error: from transformers import CLIPProcessor, CLIPModel model_identifier=”umarigan/turkish_clip” processor =…
Classifier and Heuristic Quality Filtering
While the following steps can be run manually using the commands given, we also provide a SLURM script in the examples folder that follows the same procedure. It must be filled in with the necessary parameters described below before running. The classifier-based filtering approach we have implemented follows closely to…
OAuth 2.0 & JWT – Huma
Overview OAuth 2.0 is a popular open standard authorization framework that enables you to verify that incoming requests are authorized to use your API. There are three main pieces to using OAuth 2.0 with Huma: Issue an access token to a client application Document the auth scheme and required permissions…
Unleash the Power of Vector Search with Vertex AI
Unleash the Power of Vector Search with Vertex AI Introduction What is Vector Search? The Importance of Vector Search for Businesses Getting Started with Building Production Quality Vector Search Services with Google Cloud Vertex AI Benefits of Vector Search Technology Vector Search versus Traditional Databases How AI Organizes Data Using…
c# – How to automatically generate an OpenAPI documentation from a jsonresult response?
You could do something similar as below. public static void SaveSwaggerJson(this IServiceProvider provider) { ISwaggerProvider sw = provider.GetRequiredService<ISwaggerProvider>(); OpenApiDocument doc = sw.GetSwagger(“v1”, null, “/”); string swaggerFile = doc.SerializeAsJson(Microsoft.OpenApi.OpenApiSpecVersion.OpenApi3_0); var root = AppDomain.CurrentDomain.BaseDirectory ?? “~”; string swaggerDir = Path.Combine(root, “swagger”); if(!Directory.Exists(swaggerDir)) { Directory.CreateDirectory(swaggerDir); } string fileName = DateTime.Now.ToString(“MM_dd_yyyy_hh_mm_ss_”) + “swaggerfile.json”; string…
python – OpenAPI: Return structured data from text input
Given a txt input which represents extracted resume (or “CV” outside of the US) data, pass the text to an AI model and return a JSON version of the original input. I have created the below script, which tries to prompt gpt3-turbo in order to process and return the JSON….
Unlock the Power of Generative AI in Your Applications with Gemini | by Jay Whitsitt | Jan, 2024
It’s also a great way to adjust parameters like temperature, maximum output length, and top-k value, as well as get sample implementation code. You can request different formats of output, such as json, markdown, bullet lists, etc. We won’t get into prompt engineering or tuning these parameters here, but it’s…
swagger – In OpenAPI 3 how do I use the discriminator column to map to a list of objects?
I have a response that looks like this: { resources: [ { arbitraryObject} ] } So I have an arbitraryObject that I want defined in the responses section for an endpoint: For my openapi 3.0 schema, use the #/components/schemas/Resources to discriminate a list of cats for the /cats endpoint. Here…
Google Vertex AI | Haystack
Use Google Vertex AI Models with Haystack Authors deepset Table of Contents Overview Vertex AI is a machine learning (ML) platform that lets you train and deploy ML models and AI applications, and customize large language models (LLMs) for use in your AI-powered applications. This integration enables the usage of…
A Guide on how to use Gemini in Vertex AI Studio | by MOHAN MAHESH BOGGAVARAPU | Dec, 2023
Prerequisites: Google Cloud Project: Ensure you have a Google Cloud project with billing enabled. Vertex AI API Enabled: Enable the Vertex AI API for your project. Step 1: Type “Vertex AI” into the search bar. Step 2: Search for ‘Multimodal’ on the right side of the page. The ‘Multimodal’ section…
Getting 401 in openapi scan for authenticated APIs.
Hi all I am trying to perform scan on an openapi definition file (api-qa-clone.json) .Some APIs in this definition file are open and some require token in ‘Authorization’ request header. To achieve this I am using below multi-stage Dockerfile: FROM python AS pybuildWORKDIR /tmpCOPY zap_api_automation.py .COPY options.prop .COPY api-qa-clone.json .RUN…
Validating swagger/openapi json using openapi-validations GitHub Action | by Kushal Bhalaik | Dec, 2023
Photo by Maël BALLAND on Unsplash A few months back I had a requirement of checking the APIs for the product I’m working on for breaking changes (Backward Compatibility Check) during CI/CD. As part of that research, I created an action called openapi-validations, which is essentially a wrapper on top…
ML Pipelines on GCP with Vertex AI
20 Nov 2023 by dzlab Vertex AI Pipelines are a platform for building and running machine learning workflows on Google Cloud Platform. They allow the orchestration of machine learning tasks using pre-built or custom components, and leverage the serverless and scalable infrastructure of Vertex AI. Vertex AI Pipelines is based…
java – How to set FAIL_ON_UNKNOWN_PROPERTIES to false in openapi-generator-maven-plugin
java – How to set FAIL_ON_UNKNOWN_PROPERTIES to false in openapi-generator-maven-plugin – Stack Overflow Asked today Viewed 14 times I am using openapi-generator-maven-plugin to generate Java files from the swagger yaml files. After conversion, the generated ObjectMapper is configured as FAIL_ON_UNKNOWN_PROPERTIES as true so the ObjectMapper will fail if receiving unknown…
How can I request multiple image or multiple text …
Hello, This week, I’m using Vertex AI for testing predict in image (caption) and text (summary). It works well with request containing 1 image/text. But when I trying to request multiple images/texts in a JSON object, it shown log `Invalid arguments`. Please help me to check it, if it is…
Problem uploading b64 image via API – Vertex AI API – APIs
Hey there, I’m trying to do a POST API call to Vertex AI endpoint from Google but I seem to be doing something wrong. Here’s the request that I’m sending: The b64 value I’m adding to initialise the API is what I got from an ImagetoB64 converter online. And this…
Demystifying Swagger: A Practical Guide to Implementation in PHP | by Seliesh Jacob | Dec, 2023
In the vast landscape of API development, effective documentation is the linchpin that ensures seamless collaboration between developers and their creations. Swagger, now known as the OpenAPI Specification, stands out as a robust tool that streamlines API documentation and fosters enhanced teamwork. This blog post will unravel the essence of…
line chart for sql database single row values
i have this type of database and i am using sql query to get the data and make graph by using chart js Protein starve_th_37°C starve_th_49°C starve_th_58°C P62424 1 0.437534765 0.214595311 Q13148 1 0.371686426 0.127905346 and i want to make line chart (three point connecting each other) for each row…
Demystifying OpenAPI in ASP.NET Core Web API: A Comprehensive Guide with Examples
OpenAPI, formerly known as Swagger, is a widely used specification for building APIs. In ASP.NET Core, it provides a seamless way to document and visualize APIs, aiding developers in better understanding and utilizing API endpoints. In this article, we’ll explore the fundamentals of OpenAPI in ASP.NET Core Web API with…
java – Ending requests gracefully with Vert.x openapi
I am using vertx-web-openapi version 4.2.4, and I ran into a situation where one of my services ran out of resources due to misconfiguration on the operational side. Due to that, some requests managed to end, and others did not. My Vert.x Router has a RootHandler which adds ACCESS logs…
Automated Swagger Doc Generation and Publishing for your Spring-Boot Application | by Mayur Gupta | Dec, 2023
Swagger is a suite of tools for API developers from SmartBear Software and a former specification upon which the OpenAPI Specification is based. Generate Swagger documentation and publish the swagger specification in Organization’s Central Swagger Portal As per objective the implementation in broken in two sub objectives. Generating Swagger Specification…
google cloud vertex ai – Get batch predictions from a custom trained model : JSON structure Isues
I’m trying to reproduce the Batch predictions given in this example: codelabs.developers.google.com/vertex-p2p-predictions#5 First I use this JSON lines file structure: [1, 2, 3, 4] [5, 6, 7, 8] It works well. When I try this one in the second example { “values”: [1, 2, 3, 4], “key”: 1 } {…
Using Google Cloud Vertex AI Code Chat to automate programming test scoring | by Cyrus Wong | Google Developer Experts | Dec, 2023
Traditionally, educators create unit tests to automatically score students’ programming tasks. However, the precondition for running unit tests is that the project codes must be runnable or compiled without errors. Therefore, if students cannot keep the project fully runnable, they will only receive a zero mark. This is undesirable, especially…
Extend Functionality of Generator Plugin
OpenAPI Specification is a standard for documentation of HTTP REST services. You can try it using the Swagger editor. Based on specification files, code generators generate all model, server, and client classes required for development. This article is about the OpenAPI generator. It allows the generation of API client libraries…
How to entry user-selectable page with Dockerlized Jupyterhub – JupyterHub
I am currently building JupyterHub on single machine using Docker, and I want users to access a page where they can select the Docker image they want upon logging in, like the below page. But whenever I log in using any account, the system always redirects me to the JupyterLab…
Iterate & Deploy OpenAPI spec files in a repository path. (Github Action)
So I’m trying to iterate through a list of files within a specific path in my repository. Currently using matrix as a for loop but when it iterates through the path, it uses the wildcard ‘*’ when running az import command. Below is my code. name: API Azure Deployment on:…
Gemini Pro access without Google AI Studio API key | by Paulo Taylor | Dec, 2023
As soon as the Gemini Pro LLM was released and accessible through Vertex AI I wanted to give it a try but if you’re like me and still don’t have access to the Google’s AI Studio you may run into some trouble If you don’t have access to Google AI…
BigQuery Meets LLM: Unlocking New Frontiers in AI-Driven Data Analytics | by Said Rasidin | Dec, 2023
In Bigquery we can interact with LLMs using two types, LLM to generate text (using text-bison model) or LLM to generate embedding vectors (use textembedding-gecko) Create a remote model that’s based on the text-bison large language model, and then use that model together with the ML.GENERATE_TEXT function to perform several…
swagger – Use the same request for put and post in open api
Using OpenApi and openapi-generator-maven. I want to have one request section for put and post of the same entity api, is it possible? I tried to do something like that: entities: post: tags: – EntityV1 operationId: saveEntity parameters: – $ref: ‘v1/parameters.yaml#/path/storeId’ requestBody: name: save_config_request required: true content: application/json: schema: $ref:…
Jupyterhub z2jh ingress not working – Zero to JupyterHub on Kubernetes
bpfrd December 15, 2023, 6:54pm 1 Hi, I deployed z2jh on a single-node microk8s cluster on a server and it is supposed to be used in production. The problem is ingress address is missing. here is some details: # config.yaml ingress part ingress: annotations: kubernetes.io/tls-acme: “true” enabled: true hosts: -…
spring boot – Springdoc OpenApi Annotations @ExtensionProperty Not Evaluating Properties from application.yml
I have a spring boot 3.2 project for my microservice and am using the springdoc dependency to ultimately generate an OAS document for consumption by AWS API Gateway (AGW). This service is using a REST API configuration but through VPC Link so I need to ensure that the ‘x-amazon-apigateway-integration’ extensions…
CIECA Reactivates Vehicle Damage and Imaging (VDI)/Estimating Committee
All industry stakeholders are invited to join. CIECA announced the reactivation of the Standards Development Committee focused on Vehicle Damage and Imaging (VDI)/Estimating. The committee will be chaired by CIECA Past Chair Phil Martinez, principal technical consultant at Mitchell International, an Enlyte company. “Now that new CIECA API Standards (CAPIS)…
OAS 3.0.3 request schema for an empty JSON body
I am attempting to create an OAS schema for an empty JSON body: { } I am trying to get the documentation to show an empty JSON body, and have that autogenerated. The API defines this as a POST (yes, it ought to be a GET,…
Error connecting with Vertex AI on Google Cloud – APIs
I’m trying to connect with Vertex AI from my Bubble app. I followed the regular documentation provided by Google and generated the necessities (gcloud auth access-token, and other parameters) required by the given cURL API: curl -X POST \ -H “Authorization: Bearer $(gcloud auth print-access-token)” \ -H “Content-Type: application/json; charset=utf-8″…
Annotate variants with ensembl rest api
Annotate variants with ensembl rest api 0 I have a variant file (.vcf.gz), and I want to annotate this file using the Ensembl Rest API, particularly the Vep Rest API. I am new to this variant annotation; however, I have seen a couple of codes from the Ensembl page on…
Reading a word problem stored in a image? – vision
ThePie December 14, 2023, 8:36pm 1 I wanted to see what models would be best suited for taking in a image and having the model perform a image to text (OCR of some kind) and then outputting the contents of the image in a “question” “answers” format. The set of…
json – How do you create an array in OpenAPI that has exactly 3 elements (strings) and 2 of those are enums?
If you want the items in a particular index, OAS 3.0.x does not allow an array of items because the OAS Spec modified their definition of the JSON Schema draft-04 spec. It only allows items to be an object. If you’re ok with using OAS 3.1.0, the following works well…
Understanding GPU Memory 1: Visualizing All Allocations over Time
by Aaron Shi, Zachary DeVito During your time with PyTorch on GPUs, you may be familiar with this common error message: torch.cuda.OutOfMemoryError: CUDA out of memory. Tried to allocate 512.00 MiB. GPU 0 has a total capacity of 79.32 GiB of which 401.56 MiB is free. In this series, we…
Importing Data In RStudio: A Step-By-Step Approach
Article Summary Box Recognizing various data types like numeric, integer, and logical in RStudio is essential for accurate data manipulation and import. Effective environment setup, including package installation and global option configuration, is pivotal for streamlined data import processes. Utilizing data.table’s fread function for handling large datasets enhances import efficiency,…
Unable to install bioconda and bowtie
Unable to install bioconda and bowtie 0 ➜ ~ conda install -c “bioconda/label/cf201901” bowtie Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Collecting package metadata (repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. PackagesNotFoundError: The following packages…
Charge your APIs Volume 20: Navigating the OpenAPI Initiative Workflows Specification
In the ever-changing world of API development, the OpenAPI Initiative stands as a beacon of standardisation and best practices. This collaborative and open-source project, under the auspices of the Linux Foundation, has been instrumental in establishing the standards for how APIs are described and utilised. Amongst its most notable contributions…
[slurm-users] Slurm versions 23.11.1, 23.02.7, 22.05.11 are now available (CVE-2023-49933 through CVE-2023-49938)
Slurm versions 23.11.1, 23.02.7, 22.05.11 are now available and address a number of recently-discovered security issues. They’ve been assigned CVE-2023-49933 through CVE-2023-49938. SchedMD customers were informed on November 29th and provided a patch on request; this process is documented in our security policy. [1] There are no mitigations available for…
python – Updating a notebook in Kaggle
I currently have a notebook I’ve been working on locally, and I pushed it to kaggle with the command in terminal: > kaggle kernels push -p real_estate Everything worked fine the first time I pushed it, but now that I updated the code in the notebook, when I run the…
Google Docs OpenAPI Error Correction — 2
$30-250 USD Posted about 2 hours ago • Ends in 6 days $30-250 USD Paid on delivery I have a Google Docs API that I will be using in a Custom GPT, to update Google Documents via a Custom GPT. The primary goal is to address existing errors and circular…
Swift OpenAPI Generator 1.0.0 Released – Development
We’re happy to announce that Swift OpenAPI Generator just reached the 1.0.0 milestone! Since it went open source in May 2023 with version 0.1.0, Swift OpenAPI Generator merged over 300 pull requests, released 25 updates, and introduced support for several major new features. It wouldn’t be possible without over 25…
Swagger, Help with API Development
Swagger: Revolutionizing REST APIs Introduction Swagger, now known as OpenAPI Specification, has been a game-changer in the world of RESTful APIs. In this post, we’ll explore the history of Swagger, its evolution, current popularity, and its integration with Express.js, a Node.js server-side framework. Additionally, we’ll provide a cheat sheet for…
How to Create Your First OpenAPI Specification | by Maria Berdysheva | Dec, 2023
Components In the “components,” you design the API’s contract parameters. API design is something that should be done with attention to detail. Because the API contract, once delivered in production, must remain backward compatible forever. If a mistake is made and the API contract is not designed correctly, it becomes…
Understanding OpenAPI Specification (OAS) | by Bubu Tripathy | Dec, 2023
The OpenAPI Specification (OAS) provides a standardized way to define RESTful APIs, offering a clear structure for API documentation, client generation, and server implementation. The OAS definition is organized into several key sections, each serving a specific purpose. Let’s delve into the essential components of OAS and explore how they…
Opening singleuser instance in browser in JupyterHub API-only mode – JupyterHub
Hello, I’m trying to run JupyterHub in API-only mode. I got to the part where I start the user’s instance through API, however, when I try to navigate to the URL printed out by the Hub console, this is what happens: This is the URL I get redirected to: 127.0.0.1:50585/hub/api/oauth2/authorize?client_id=jupyterhub-user-milos%2540milos.com&redirect_uri=%2Fuser%2Fmilos%40milos.com%2Foauth_callback&response_type=code&state=eyJ1dWlkIjogIjYyYTI2NzA0MmU2NTQzNmY5NmU0NmY5MjQxNTYzZmQwIiwgIm5leHRfdXJsIjogIi91c2VyL21pbG9zQG1pbG9zLmNvbS9sYWI_dG9rZW49In0…
Features Overview – Huma
Huma is a modern, simple, fast & flexible micro framework for building HTTP REST/RPC APIs in Golang backed by OpenAPI 3 and JSON Schema. Pronounced IPA: /’hjuːmɑ/. The goals of this project are to provide: A modern REST or HTTP RPC API backend framework for Go developers Incremental adoption for…
24 OpenAPI Interview Questions and Answers
Introduction: Welcome to our comprehensive guide on OpenAPI interview questions and answers! Whether you’re an experienced developer looking to brush up on your skills or a fresher entering the exciting world of API development, this resource is designed to help you navigate common questions that may arise during an OpenAPI…
Help me understand my profiled function – vision
I’ve designed a filter and ran it through the pytorch profiler to better understand if I can make the filter any faster. I call the filter in this fashion: with torch.autograd.profiler.profile(use_cuda=True) as prof: wiener_filtered = wiener_denoiser(curr_img.to(device), std_curr.to(device) * k) print(prof.key_averages().table(sort_by=”self_cuda_time_total”)) prof.export_chrome_trace(“trace.json”) Below is the json view of the profile: One…
Is there a way to create a REST API token with user’s OAuth token through REST API – Zero to JupyterHub on Kubernetes
Hi Jovyans, Jupyterhub version: 1.4.2 Authenticator: GenericOAuthenticator Issue: Need to call REST API(/users//server) to start user server, this requires an user’s API token. I’ve been blocked with ‘how to create an API token for an user through a REST API’ I’m able to manually create an user’s API token on…
C# library and samples for GenAI in Vertex AI | by Mete Atamel | Google Cloud – Community | Dec, 2023
In my previous post, I talked about multi-language libraries and samples for GenAI. In this post, I want to zoom into some C# specific information for GenAI in Vertex AI. If you want to skip this blog post and just jump into code, there’s a collection of C# GenAI samples…
Unlock the Power of OpenAPI
Unlock the Power of OpenAPI Introduction The Importance of Open APi Spec First API Design How to Use Open API for Existing API Open API Tools Generating Documentation from Open API Spec Generating Mock Servers from Open API Spec Generating SDKs from Open API Spec Conclusion Resources In today’s rapidly…
How to create a Chat-GPT clone starter | by Hamza ELJAOUHARI | Dec, 2023
Creating a Chat-GPT clone is a complex task, but I can guide you through the main steps, providing code snippets to illustrate the process. This guide assumes familiarity with Python, machine learning libraries like TensorFlow or PyTorch, and basic concepts of neural networks. Ensure you have Python installed. You will…
c# – Set request body example in OpenApi using MinimalApi
I try to dynamically build a minimal api in ASP.Net Core application and I struggle with generating a request body example. I tried to solved it like this: .WithOpenApi(x => { x.RequestBody = new() { Content = new Dictionary<string, OpenApiMediaType>() { { “application/json”, new OpenApiMediaType() { Example = new OpenApiString(JsonSerializer.Serialize(new…
Change baseurl for Openapi Resource – Queries and Resources
Hello! I would like to use the Amazon SP Api with Retool. I tried it with the restapi and it works. But it would be easier for me to import the JSON model file with Openapi. However, I cannot change the stored baseurl?Can someone tell me the best way to…
Using OpenApi Generator, is it possible to generate kotlin clients, which contain only the endpoints tagged by specific tags?
Given this spec: { “openapi”: “3.0.1”, “info”: { “title”: “OpenAPI definition”, “version”: “v0” }, “servers”: [ { “url”: “http://localhost:8080”, “description”: “Generated server url” } ], “paths”: { “/notes”: { “get”: { “tags”: [ “drinks” ], “summary”: “get all notes”, “operationId”: “notesEndpoint”, “responses”: { “200”: { “description”: “OK”, “content”: { “application/json”:…
Associating Segmentation Results with Image URIs
I used the Vertex AI Model Garden notebook to upload a DeepLabv3+ model to the model registry. As I realized, my input data in JSONL format should include each image in base 64 encoding on each line. Upon trying, it seems I cannot provide the input in any other form…
The most effective Schema-Driven Development using OpenAPI for Logistic Engineer
In web application development, your team use OpenAPI document in many cases When you separate backend and frontend. But, the API specification document based on OpenAPI is written in yaml or json format. Then it is a very stressful task. Also, writing up the API document doesn’t mean completing by…
Testing a PyTorch machine learning model with pytest
This tutorial covers: PyTorch is an open-source machine learning (ML) framework that accelerates the path from research prototyping to production deployment. You can work with PyTorch using regular Python without delving into the underlying native C++ code. It contains a full toolkit for building production-worthy ML applications, including layers for…
DALGWSTigerTeam < IVOA < TWiki
The Protocol Modernization Tiger Team was formed in Tucson at the Interop meeting in Nov 2023. The aim is to address the question of compatibility of the DAL protocols (and by implication protocols such as UWS) with modern web development tools. A number of people volunteered to form a tiger…
python – How to solve Internal Server Error when integrating Swagger/OpenAPI
a college student here trying to finish a confusing assignment at 4am. The end goal should be to produce a centralized log server, where different systems can run a python script that sends all kinds of logs to this server. I have to design an API for a centralized server…
sam – Discrepancy in Read Counts Between FastQ and BAM Files in Adapter-Trimmed Pipeline
In a FastQ to BAM pipeline where only adapter trimming is performed, I’ve noticed a potential discrepancy in read counts between the initial FastQ files and their resulting BAM file. Specifically, I’m seeking clarification on whether the following statement holds true: “Total number of reads in R1 and R2 FastQ…
yaml – OpenAPI/Swagger: Array in the response
I want to return a list of Activity’s in a path. I tried to accive this by defining the Activity type in the items property: #… # intendation is not correct here responses: ‘200’: description: Successful response content: application/json: schema: type: array items: $ref: ‘#/components/responses/Activity’ #… components: responses: Activity: description:…
Slurm REST API in AWS ParallelCluster
This post was contributed by Sean Smith, Sr HPC Solution Architect, and Ryan Kilpadi, SDE Intern, HPC AWS ParallelCluster offers powerful compute capabilities for problems ranging from discovering new drugs, to designing F1 race cars, to predicting the weather. In all these cases there’s a need for a human to…
eciboadaptech/finapi-webform – Packagist
The following pages give you some general information on how to use our APIs.The actual API services documentation then follows further below. You can use the menu to jump between API sections. This page has a built-in HTTP(S) client, so you can test the services directly from within this page,…
megablast taxonomy assign in blobtools
megablast taxonomy assign in blobtools 0 I made taxonomy assignment file using megablast and ran blobtools create, view, plot. However I couldn’t get any taxonmy assignment in the plot, there is only undefined. How can I get bacterial information ? $blastn -task megablast -db ${nrdb} -query scaffold$i.fa -outfmt ‘6 qseqid…
How to generate Swift non-nullable types using OpenApi generator?
I’m playing around with Swift code generation and would like to get some advice. Does swift5 generator support generating non-nullable types? I’ve read the docs but I could not find any information about it. I tried generating some code to figure it out. In spec I defined the title as…
Specify both file content and body content in open…
In my web application, when I create a form-data object that looks like the following: let fd = new FormData();let data = {};data.id = 5; // thing id, if this is an existing thingdata.thingName=”Resource Test”; // actual value from modal formdata.thingType=”Type Check”; // actual value from modal formdata.relatedThingId =…
GPT Model Behind the Scene Exploring it from scratch with Pytorch by Chee Kean Artificial
GPT Model Behind the Scene: Exploring it from scratch with Pytorch CheeKean · Follow Published in Artificial Intelligence in Plain English 18 min read · Apr 22 Listen Share More Discover the intricacies of building and exploring a GPT model from scratch with an in-depth explanation that covers technical details…
Django-Ninja Unleashed: Crafting Stellar APIs | by StartxLabs Technologies | Dec, 2023
Django-Ninja Unleashed: Crafting Stellar APIs In the dynamic realm of web development, the quest for the perfect framework to build robust and efficient REST APIs has led developers to explore alternatives beyond the traditional. Enter Django-Ninja, a Python web framework tailored specifically for crafting RESTful APIs. In this comprehensive guide,…
Understanding Google Colab commands to running deep learning projects using Kaggle data API | by Sachinsoni | Dec, 2023
!mkdir -p ~/.kaggle!cp kaggle.json ~/.kaggle/ 1. About !mkdir -p ~/ .kaggle !mkdir -p ~/.kaggle: This line uses the mkdir command to create a directory named .kaggle in the user’s home directory (~). The -p option ensures that the command creates parent directories as needed. This command is used to make…
API testing challenges: valid negative scenarios | by Enes Kuhn | Dec, 2023
API testing is an important aspect of software testing, it is fast, fun, and automatable. Amidst the complexity of modern applications, Swagger documentation steps up as a powerful ally, particularly in handling the nuances of negative scenarios. In this blog post, we’ll dive into how knowing “Swagger documentation syntax” can…
error when installing gistic2 using conda
error when installing gistic2 using conda 0 Dear all, How to fix the error when using conda to install the gistic2? I already use conda to create a new directory/environment, and then conda install -hcc gistic2 as the conda website shows anaconda.org/HCC/gistic2 conda install -c hcc gistic2 Collecting package metadata…
Learn Rstudio Ide: Quick, Effective, and Productive Data Science (Paperback)
$37.99 Usually Ships in 1-5 Days Description Discover how to use the popular RStudio IDE as a professional tool that includes code refactoring support, debugging, and Git version control integration. This book gives you a tour of RStudio and shows you how it helps you do exploratory data analysis; build…
Are my @Schema openapi server annotations invalid? Openapi client generates inheritance for Java, Python, Angular, R, but not for C, C++, Go and Scala
I have some accounting model classes defined in Java: @Schema(description = “Comptes avec total, par habitant, moyenne strate, total réduction votée, réduction par habitant, réduction moyenne strate”, allOf = ComptesAvecReductionVotee.class, discriminatorProperty = “typeCompteIndividuel”) public class ComptesAvecStrateEtReductionVotee extends ComptesAvecReductionVotee { private Double moyenneStrate; private Double reductionVoteeParHabitant; private Double reductionVoteeMoyenneStrate; public ComptesAvecStrateEtReductionVotee()…
Can’t install hisat2 with miniconda
Can’t install hisat2 with miniconda 0 I’ve been trying to install hisat2 with Miniconda but I keep getting this error. Miniconda is updated and seemingly installed. Also I’m on Mac OS. Please Advise. Channels: bioconda default defaults conda-forge Platform: osx-arm64 Collecting package metadata (repodata.json): done Solving environment: failed PackagesNotFoundError: The…
Autism has quirks i can follow my own yellow brick road but anyone elses and iiiiiiiiss s dnnfjxbv – Community
Continuing the discussion from Title: Project completedl: : AIOS #3.2 upgrade process: If your API is defined using OpenAPI (formerly known as Swagger), that’s excellent for ensuring a clear, standardized, and interactive documentation. OpenAPI is widely used for designing, building, and documenting RESTful APIs, making your API more accessible and…
PDBe CCDUtils: an RDKit-based toolkit for handling and analysing small molecules in the Protein Data Bank | Journal of Cheminformatics
The Protein Data Bank (PDB) [1], managed by the worldwide PDB (wwPDB) consortium [2], serves as the single global repository for information on 3D structures of proteins, nucleic acids, and complex assemblies. With over 200,000 entries as of July 2023, about 75% of these structures contain at least one small…
Automating API Documentation: A Journey from TypeScript to OpenAPI and Schema Governence with Optic
In the previous blog post Documenting and Testing Schemas of Serverless Stacks with Optic & Cypress, we focused on the benefits of schema testing and governance. Briefly, some of the core problems addressed were: Effortless API Documentation: Automating the API documentation creation and update, ensuring that our API documentation evolves…
RStudio For Quantitative Finance
Introduction to RStudio R is widely used in quantitative finance due to its extensive statistical capabilities, data manipulation tools, and its active community that develops and maintains specialized packages for finance. It offers a wide range of functionalities that enable professionals in the finance industry to analyze data, build models,…
OpenAPI media, how to get url? – Twitter API
What endpoint are you using?‘getUsersIdBookmarks’ GET /2/users/:id/bookmarks Api v2 sdk: twitterdev/twitter-api-typescript-sdk What is the issue?Trying to obtain Media specific fields (like preview_image_url, or url) Steps to reproduce the issueStep 1:Create a request const res = await client.bookmarks.getUsersIdBookmarks(“userId”, { “media.fields”: [“media_key”, “preview_image_url”, “url”], expansions: [“attachments.media_keys”], }); Step 2:Get media const media…
Generate client from CDF openapi spec for Go
I am unable to generate client code for the CDF openapi spec at api-docs.cognite.com/20230101/ using deepmap/oapi-codegen for Go, seemingly because the spec contains some errors. Do anyone know of a way to generate an api-client in go for the CDF-api spec? Both commands below rely on having openapi spec…
dependency_licenses.csv – solr-operator – Git at Google
github.com/beorn7/perks/quantile,github.com/beorn7/perks/blob/v1.0.1/LICENSE,MIT github.com/cespare/xxhash/v2,github.com/cespare/xxhash/blob/v2.1.2/LICENSE.txt,MIT github.com/davecgh/go–spew/spew,github.com/davecgh/go-spew/blob/v1.1.1/LICENSE,ISC github.com/emicklei/go–restful/v3,github.com/emicklei/go-restful/blob/v3.9.0/LICENSE,MIT github.com/evanphx/json–patch/v5,github.com/evanphx/json-patch/blob/v5.6.0/v5/LICENSE,BSD-3-Clause github.com/fsnotify/fsnotify,github.com/fsnotify/fsnotify/blob/v1.6.0/LICENSE,BSD-3-Clause github.com/go–logr/logr,github.com/go-logr/logr/blob/v1.2.3/LICENSE,Apache-2.0 github.com/go–logr/zapr,github.com/go-logr/zapr/blob/v1.2.3/LICENSE,Apache-2.0 github.com/go–openapi/jsonpointer,github.com/go-openapi/jsonpointer/blob/v0.19.5/LICENSE,Apache-2.0 github.com/go–openapi/jsonreference,github.com/go-openapi/jsonreference/blob/v0.20.0/LICENSE,Apache-2.0 github.com/go–openapi/swag,github.com/go-openapi/swag/blob/v0.21.1/LICENSE,Apache-2.0 github.com/gogo/protobuf,github.com/gogo/protobuf/blob/v1.3.2/LICENSE,BSD-3-Clause github.com/golang/groupcache/lru,github.com/golang/groupcache/blob/41bb18bfe9da/LICENSE,Apache-2.0 github.com/golang/protobuf,github.com/golang/protobuf/blob/v1.5.2/LICENSE,BSD-3-Clause github.com/google/gnostic,github.com/google/gnostic/blob/v0.6.9/LICENSE,Apache-2.0 github.com/google/go–cmp/cmp,github.com/google/go-cmp/blob/v0.5.9/LICENSE,BSD-3-Clause github.com/google/gofuzz,github.com/google/gofuzz/blob/v1.2.0/LICENSE,Apache-2.0 github.com/google/uuid,github.com/google/uuid/blob/v1.3.0/LICENSE,BSD-3-Clause github.com/imdario/mergo,github.com/imdario/mergo/blob/v0.3.13/LICENSE,BSD-3-Clause github.com/josharian/intern,github.com/josharian/intern/blob/v1.0.0/license.md,MIT github.com/json–iterator/go,github.com/json-iterator/go/blob/v1.1.12/LICENSE,MIT github.com/mailru/easyjson,github.com/mailru/easyjson/blob/v0.7.7/LICENSE,MIT github.com/matttproud/golang_protobuf_extensions/pbutil,github.com/matttproud/golang_protobuf_extensions/blob/v1.0.4/LICENSE,Apache-2.0 github.com/moby/spdystream,github.com/moby/spdystream/blob/v0.2.0/LICENSE,Apache-2.0 github.com/modern–go/concurrent,github.com/modern-go/concurrent/blob/bacd9c7ef1dd/LICENSE,Apache-2.0 github.com/modern–go/reflect2,github.com/modern-go/reflect2/blob/v1.0.2/LICENSE,Apache-2.0 github.com/munnerz/goautoneg,github.com/munnerz/goautoneg/blob/a7dc8b61c822/LICENSE,BSD-3-Clause github.com/pkg/errors,github.com/pkg/errors/blob/v0.9.1/LICENSE,BSD-2-Clause github.com/pravega/zookeeper–operator/api/v1beta1,github.com/pravega/zookeeper-operator/blob/v0.2.15/LICENSE,Apache-2.0 github.com/prometheus/client_golang/prometheus,github.com/prometheus/client_golang/blob/v1.14.0/LICENSE,Apache-2.0 github.com/prometheus/client_model/go,github.com/prometheus/client_model/blob/v0.3.0/LICENSE,Apache-2.0 github.com/prometheus/common,github.com/prometheus/common/blob/v0.37.0/LICENSE,Apache-2.0 github.com/prometheus/common/internal/bitbucket.org/ww/goautoneg,github.com/prometheus/common/blob/v0.37.0/internal/bitbucket.org/ww/goautoneg/README.txt,BSD-3-Clause github.com/prometheus/procfs,github.com/prometheus/procfs/blob/v0.8.0/LICENSE,Apache-2.0 github.com/robfig/cron/v3,github.com/robfig/cron/blob/v3.0.1/LICENSE,MIT github.com/spf13/pflag,github.com/spf13/pflag/blob/v1.0.5/LICENSE,BSD-3-Clause go.uber.org/atomic,github.com/uber-go/atomic/blob/v1.9.0/LICENSE.txt,MIT go.uber.org/multierr,github.com/uber-go/multierr/blob/v1.8.0/LICENSE.txt,MIT go.uber.org/zap,github.com/uber-go/zap/blob/v1.24.0/LICENSE.txt,MIT golang.org/x/net,cs.opensource.google/go/x/net/+/v0.7.0:LICENSE,BSD-3-Clause golang.org/x/oauth2,cs.opensource.google/go/x/oauth2/+/622c5d57:LICENSE,BSD-3-Clause golang.org/x/sys/unix,cs.opensource.google/go/x/sys/+/v0.5.0:LICENSE,BSD-3-Clause golang.org/x/term,cs.opensource.google/go/x/term/+/v0.5.0:LICENSE,BSD-3-Clause golang.org/x/text,cs.opensource.google/go/x/text/+/v0.7.0:LICENSE,BSD-3-Clause golang.org/x/time/rate,cs.opensource.google/go/x/time/+/v0.3.0:LICENSE,BSD-3-Clause gomodules.xyz/jsonpatch/v2,github.com/gomodules/jsonpatch/blob/v2.2.0/v2/LICENSE,Apache-2.0 google.golang.org/protobuf,github.com/protocolbuffers/protobuf-go/blob/v1.28.1/LICENSE,BSD-3-Clause gopkg.in/inf.v0,github.com/go-inf/inf/blob/v0.9.1/LICENSE,BSD-3-Clause gopkg.in/yaml.v2,github.com/go-yaml/yaml/blob/v2.4.0/LICENSE,Apache-2.0 gopkg.in/yaml.v3,github.com/go-yaml/yaml/blob/v3.0.1/LICENSE,MIT…
Building Swagger Documentation with Java Spring Boot Using OpenAPI
In the fast-paced world of software development, effective API documentation is crucial. It helps developers understand how to use your APIs, accelerates integration, and fosters collaboration. In this tech blog, we’ll explore how to generate Swagger documentation from OpenAPI specifications using Java Spring Boot. Swagger is a widely used tool…
Help! RStudio starts to a blank screen after update; clean install worked, but not after time machine backup. – RStudio IDE
Error Information: Description of issue – After updating to OS Sonoma, RStudio is a blank window. I only see the name of the toolbar. There are no options in the toolbar either, it says empty. R app works fine. Attempted steps taken to fix –Reinstalled appsReinstalled OS system sonoma (didn’t…
Ipyrad de novo for variant calling
Ipyrad de novo for variant calling 1 Hello everyone, I am trying to run ipyrad to generate a SNP data set de novo (I do not have a good enough reference genome for my species). I have already demultiplexed my raw data and removed the barcodes and adapters. Does anyone…
Action group OpenAPI schemas – Amazon Bedrock
When you create an action group, you must define the APIs that the agent can invoke with an OpenAPI schema in JSON or YAML format. You can create OpenAPI schema files yourself and upload them to Amazon S3 buckets, or you can use our OpenAPI text editor in order to…
Testing an OpenAPI specification in PHP
Introduction OpenAPI has become the de facto standard for API specifications. According to its description, “It is a specification language for HTTP APIs that defines structure and syntax in a way that is not wedded to the programming language the API is created in”. The specification is independent of the…
Awesome List Updates on Nov 29, 2023
7 awesome lists updated today. 🏠 Home · 🔍 Search · 🔥 Feed · 📮 Subscribe · ❤️ Sponsor Projects / API Management WSO2 API Manager (⭐778) (⭐778) – A fully open-source API management platform that provides comprehensive API management capabilities and allows you to manage APIs with ease. Projects…
OpenAPI & AsyncAPI $ref: Advanced Guide
After using OpenAPI or AsyncAPI for a while, you might notice your description documents have become a rather unwieldy mess of YAML and JSON. You end up with a whole lot of repetition, and this huge mess just loves to trigger merge conflicts as multiple developers change different things but…