Tag: Jupyter

Bioinformatics Developer (Intermediate To Senior) in New Zealand

Job Details Auckland, Auckland, New Zealand Netvalue Ltd Posted 1 day ago Want updates for this and similar Jobs? This advertiser has chosen not to accept applicants from your region. Full Job Description Bioinformatics Developer (Intermediate to Senior) Bioinformatics Developer (Intermediate to Senior) 15 openings But enough about us, what…

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Problems rendering a quarto qmd file through jupyter in VS Code – JupyterHub

bj631 January 19, 2024, 10:45pm 1 I’m trying to preview a .qmd file using quarto with jupyter in VS Code. There is a little banner in the bottom right corner that shows up when trying to render the .qmd that says ” command ‘quarto.preview’ not found “. It is a…

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Skip failed “mount” for notebook volumes – Zero to JupyterHub on Kubernetes

seb31 January 19, 2024, 2:17pm 1 Hello, We configured jupyterhub so that we mount NAS shares in our users’ notebooks, great.Some are NFS mounts, other are kerberized ones, and we also have some case where we use SMB CSI and mount shares based on k8s secrets containing user/password The problem…

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DataLab 0.10 / A new image processing platform (based on Python, scikit-image, …) – Announcements

Dear all, As a new participant here, I wish to respect the established norms and guidelines – so should there be any nuances I may miss, I welcome your guidance. I am posting to share with you DataLab, a new open-source platform mainly used for image processing and based on…

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Leveraging Google’s Data and AI Technologies with Kaggle

Leveraging Google’s Data and AI Technologies with Kaggle Introduction The Growth of Kaggle within Google The Kaggle Community 3.1 The Technical Professional Community 3.2 Learning and Skill Enhancement 3.3 Sharing and Collaboration Kaggle Products and Features 4.1 Kernels: An in-browser Coding Environment 4.2 Forums: Active Technical Discussion Platform 4.3 Events:…

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python – Within Jetbrain DataSpell Jupyter Notbook IPython.Display.SVG Images are not displayed fully/cut off

I am using Dataspell to work in a Jupyter Notebook with an conda environment. When I try to display a IPython.display.SVG graphic, it is not rendered correctly and parts are cut off. I am following along this tutorial. When I use the SVG function imported from from IPython.display import SVG…

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kubernetes – Setting up JupyterHub on K8s: Can I forward the user to different node pool (cpu vs. gpu)

I am currently investigating whether it’s worth to setup Jupyter on K8s. I came across this website: z2jh.jupyter.org/en/latest/index.html. One of the questions I have is forwarding a user to appropriate node pool. I will have 2. One is with CPU running and one with GPU active. I don’t want all…

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Solved Submission Notes:You need to solve this task using

Submission Notes: You need to solve this task using XGBoost ML Algorithm, You need to upload a Jupyter Notebook, Follow the remaining steps below. Question #1: (15 Points) Kaggle hosts a data set which contains the price at which houses were sold for King County, which includes Seattle – city…

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Help getting the right blob mount permissions – Zero to JupyterHub on Kubernetes

Hello,I have a cluster running on AKS after following the guideI am trying to mount a static Azure Blob Storage (bring your own storage) shared by all of the singleuser pods (I have a custom spawner that mounts subdirectories of the blob). I have setup an SC, PV, and PVC…

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ML Pipelines on GCP with Vertex AI

20 Nov 2023 by dzlab Vertex AI Pipelines are a platform for building and running machine learning workflows on Google Cloud Platform. They allow the orchestration of machine learning tasks using pre-built or custom components, and leverage the serverless and scalable infrastructure of Vertex AI. Vertex AI Pipelines is based…

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Cloudflare Revolutionizes AI Deployment with Cutting-Edge MLOps Platform

Summary: Cloudflare’s innovative MLOps platform is transforming the landscape of Artificial Intelligence (AI) deployment. With a focus on collaboration, scalability, and optimized workflows, Cloudflare is leading the way in delivering robust ML training methodologies at an unparalleled scale. Cloudflare’s MLOps strategy encompasses the implementation of best practices in collaboration with…

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Unlocking Innovation: Harness the Power of 4 Leading Machine Learning Tools in Software Development

In the dynamic panorama of technological advancement, the fusion of machine learning paradigms with the realm of software development has taken center stage. The burgeoning complexity of contemporary software necessitates a paradigm shift, and this metamorphosis is aptly facilitated by the integration of sophisticated machine-learning tools. These tools, endowed with…

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How to entry user-selectable page with Dockerlized Jupyterhub – JupyterHub

I am currently building JupyterHub on single machine using Docker, and I want users to access a page where they can select the Docker image they want upon logging in, like the below page. But whenever I log in using any account, the system always redirects me to the JupyterLab…

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Jupyter Lab 04 – Limits, Infinity, and Asymptotes

Jupyter Lab 04 – Limits, Infinity, and Asymptotes (autosaved) File + Edit View Insert Cell %D Related Course Material Example 1 Use SageMath to evaluate lim h→0 In [ ]: M In [ ]: Sections 2.1, 2.2, 2.4, and 2.6 In [ ]: N In [ ]: Run Kernel Widgets…

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Data Science Hiring Process at Marlabs

Founded in 2011, New York-based IT services and consulting firm Marlabs helps companies of various sizes to undergo AI-powered digital transformation. It provides a wide range of services, including strategic planning, creating rapid prototypes in specialised labs, and applying agile engineering techniques to develop and expand digital solutions, cloud-based applications…

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Best Google Colab Alternatives 2024: enhance collaborative coding

There are the best Google Colab Alternatives that you can consider. According to data scientists and people working on machine learning projects, Google Colab is a popular platform because it is easy to use, cheap, and works well with Google Drive. Even though Google Colab is very popular, there are…

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Jupyterhub – single user notebook servers shuts down

I would like to use the Jupyter Scheduler extension. jupyter-scheduler.readthedocs.io/en/latest/users/index.html#installation The installation is working fine.I then set up a job that runs once a day. This also works without any problems. However, I have noticed one issue. If I don’t use the app for a few days, my notebook server…

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Tljh-reload stuck in infinite loop of Hub not ready: (HTTP status 502) InsecureRequestWarning: Unverified HTTPS request is being made to host while setting up azuread OAuthenticator – The Littlest JupyterHub – Jupyter Community Forum

Sure,the tljh-config file looks like: and the logs show this:Dec 15 18:18:45 JupyterHub python3[2671]: File “/usr/lib/python3.6/importlib/init.py”, line 126, in import_moduleDec 15 18:18:45 JupyterHub python3[2671]: return _bootstrap._gcd_import(name[level:], package, level)Dec 15 18:18:45 JupyterHub python3[2671]: File “”, line 994, in _gcd_importDec 15 18:18:45 JupyterHub python3[2671]: File “”, line 971, in _find_and_loadDec 15 18:18:45…

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Rstudio Shortcut to Restart R Session + Run All

In RStudio there is a shortcut for Restart Session (Ctrl+Shift+F10) and another one for Run All (Ctrl + Alt + R), but I often want to do the first one followed by the second one, like in other environments like Jupyter Notebooks. I see there’s no such an option in…

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Computational Biology, Bioinformatics Internship – Summer 2024 at Takeda Pharmaceutical

By clicking the “Apply” button, I understand that my employment application process with Takeda will commence and that the information I provide in my application will be processed in line with Takeda’sPrivacy Noticeand Terms of Use. I further attest that all information I submit in my employment application is true…

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Senior R Studio Administrator – Remote – EPAM Systems

If you are looking for a high-impact Senior R Studio Administrator with a global leader in digital transformation, EPAM is the perfect next step in your career! As an EPAMer, you’ll have the opportunity to work with a supportive team, on a variety of interesting projects for some of the…

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The leading generative AI companies

In short The generative AI market went from nearly nothing to a hot market within a year, as shown by IoT Analytics’ latest research report. IoT Analytics analyzed 3 interconnected markets for generative AI: 1) data center GPUs, 2) foundational models and platforms, and 3) generative AI services. Each has…

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Installing JupyterHub via Stackable Demo on K8s | by Alex McLintock | Dec, 2023

docs.stackable.tech/home/stable/demos/jupyterhub-pyspark-hdfs-anomaly-detection-taxi-data So, this is an article in an ongoing series where I investigate the deployment tools of Stackable.tech This firm supplies supported versions of many open source data engineering tools to easily build data platforms on Kubernetes (k8s) clusters. These can be on your own premises, in a data centre,…

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Docker Hub for Jupyter/PyTorch is missing – JupyterLab

Hi Everyone. Kindly help me to refer where to pull docker image for Jupyter/PyTorch-Notebook for the tag first semester of 2023 and goes backward to Year 2022. As I unable to found the relevant link on Docker Hub Jupyter I need it in order to setup my past projects along…

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Amazon Improves SageMaker

Amazon has added eight new features to Amazon SageMaker, its end-to-end machine learning (ML) service. Amazon SageMaker is a fully-managed platform that can be used to build, train, and deploy machine learning models at any scale. It includes hosted Jupyter notebooks for exploring and visualizing your training data…

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URI encoding? “.” character in the LDAP authentication – Zero to JupyterHub on Kubernetes

Hello, members. When the user(jupyter.user contains . character) login, Expect behavior: create home jupyter.user Actual behavior: create home jupyter-2euser %2E means ., in the URI encode.So, I suspect Z2JH encodes some characters.Does anyone know how to fix it? hub: config: Authenticator: enable_auth_state: true JupyterHub: authenticator_class: ldapauthenticator.LDAPAuthenticator LDAPAuthenticator: server_address: ldapserver lookup_dn:…

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Single-cell DNA methylome and 3D multi-omic atlas of the adult mouse brain

Mouse brain tissues All experimental procedures using live animals were approved by the Salk Institute Animal Care and Use Committee under protocol number 18-00006. Adult (P56) C57BL/6J male mice were purchased from the Jackson Laboratory at 7 weeks of age and maintained in the Salk animal barrier facility on 12-h dark–light…

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Some thoughts on Z2JH “Trash” – feel like I’m close but need some nudge(s) in the right direction? – Zero to JupyterHub on Kubernetes

I’d like to provide a file ‘security net’ for my users using Z2JH. My solution would be to utilize a share file system, mounted to each pod. extraVolumes: – name: trash persistentVolumeClaim: claimName: trash-pvc extraVolumeMounts: – name: trash mountPath: # Would this be ~/.local/share/Trash? /.Trash? subPath: trash I can toggle…

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How does the cull values get used in the jupyerhub helm chart – JupyterHub

Shi_Jin December 12, 2023, 4:48am 1 First of all, everything is working and I am just puzzled at how it works. According to github.com/jupyterhub/zero-to-jupyterhub-k8s/blob/f11f8ea8ea857917f59b7f9a1b79a9570e21e622/jupyterhub/values.yaml#L653-L668, I am able to specify my own cull values like cull: timeout: 600 every: 60 users: true adminUsers: true And when I installed the jupyterhub helm…

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Bug#1056885: sagemath: ftbfs with cython 3.0.x

Control: tags -1 patch On Sun, 26 Nov 2023 10:06:52 +0000 Matthias Klose wrote: If the package cannot be built with cython 3.0.5, please change the build dependency from cython3 to cython3-legacy (available now in unstable). There is no replacement for cython3-dbg. The attached patch switches to cython3-legacy as the…

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Issue with Jupyter Notebook Kernel When Importing PyTorch Package – Notebook

UF99 December 11, 2023, 11:17am 1 Hello everyone, Subject: Issue with Jupyter Notebook Kernel When Importing PyTorch Package I recently installed a new version of Jupyter Notebook. However, I encountered a problem when attempting to use the PyTorch package. Every time I try to import the package, the notebook notifies…

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Where To Find Datasets For Machine Learning

Government Websites Government websites are excellent sources of datasets for machine learning projects. Many government organizations collect a vast amount of data covering a wide range of subjects, from demographics to climate change. These datasets are often comprehensive, reliable, and freely accessible, making them valuable resources for researchers, analysts, and…

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What Are Machine Learning Platforms

Supervised Learning Platforms Supervised learning is a popular approach in machine learning where algorithms are trained on labeled data to make predictions or classify new data. These platforms provide a comprehensive set of tools and frameworks to enable developers and data scientists to build and deploy supervised learning models with…

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JupyterHub + SingleUserServer in API only mode – JupyterHub

Hi, My goal is to run both JupyterHub and the SingleUser servers in API only mode. I have not been able to do so for either and any guidance would be greatly appreciated. Does anyone have any tips on what I could do to put JupyterHub and SingleUser server in…

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90 Days Of Theoretical And Practical Material To Study In Mexico

Artificial intelligence is on everyone’s lips. At the moment it is the trendy tool and has proven to be incredibly effective. So you should have a good idea of ​​what this field of computing really is and with this free Microsoft course you can take your first steps into AI….

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Problem with DockerSpawner volumes – JupyterHub

Hi Guys!Nice to meet you all here.I have a problem with permissions for user volumes.They are being created with root:root ownership and user does not have permission to write there.def create_dir_hook(spawner):username = spawner.user.name # get the usernamevolume_path = os.path.join(‘/volumes/jupyterhub/’, username)print(f”Checking if {volume_path} exists…”) if not os.path.exists(volume_path): print(f”{volume_path} does not exist….

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Sharing some data with each users. (creating symblink or bind mount) – Zero to JupyterHub on Kubernetes

Hello members. 1. Overview This configuration mounts NFS volumes on the following mount points. /home/jovyan /home/shared IIUC, A Z2JH user doesn’t access /home/shared by default.So, I want to create a symlink or bind mount point like /home/jovyan/shared.Does anyone know what configuration file I can set bind mount or symlink? singleuser:…

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How to write Rust in JupyterLab – Bioinformatics with Rust

Generated with AI This is going to be a super short article. After installing Rust and Jupyter Lab, you just need to run the following commands one-by-one. cargo install evcxr_jupyterevcxr_jupyter –install You might get some errors, but the terminal should give you enough information to resolve them. For example, if…

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Cannot connect to the server, what am I missing? – JupyterHub

The hub on the host severed directly on my machine (not via docker image). I run the jupyterhub with command arg –debug, and got the terminal infomation as follows: root@DESKTOP-L60P4Q8:~/my_docker/main# jupyterhub –debug -f ../jupyterhub_config.py [D 2023-12-07 23:00:23.417 JupyterHub application:908] Looking for ../jupyterhub_config in /root/my_docker/main [D 2023-12-07 23:00:23.417 JupyterHub application:929] Loaded…

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Use logistic regression to predict on multiclass probabilities using Kaggle’s cirrhosis dataset | by Tracyrenee | Dec, 2023

According to the NHS website, cirrhosis is scarring of the liver caused by continuous, long-term liver damage. Scar tissue replaces healthy tissue in the liver and prevents the liver from working properly. The damage caused by cirrhosis can’t be reversed and can eventually become so extensive that your liver stops…

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ServerApp.iopub_data_rate_limit – Zero to JupyterHub on Kubernetes

escader December 6, 2023, 12:43pm 1 Hello. I deployed jupyterhub using helm chart v.2.0.0 and jupyterhub version 3.4.6. I get an error when doing a task. !!! I tried to set the jupyter notebook parameter –NotebookApp.iopub_data_rate_limit=100000000 when building docker, but I get ‘iopub_data_rate_limit’ has moved from NotebookApp to ServerApp. I…

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Is there a way to set the root directory in `JupyterHub`? – JupyterHub

I am using the base-notebook image as a Spawner, and I cannot figure out how to set the baseDir to limit the user to access to the specified folder (I’m using the jupyter kernel evcxr, and I uninstalled the kernel ipykernel and forbidden opening terminal in jupyter, so the only…

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JupyterJupyterhub and Enterprise Gateway error starting kernel – JupyterHub

OrenZ1 December 5, 2023, 5:56pm 1 Hello!I am using jupyter enterprise gateway 3.2.2 with jupyter hub 2.1.1 and JupyterLab 3.6.3.I am having a weird problem when starting a kernel on a kubernetes cluster. The images I use for the kernels are heavy, and so it takes long to pull them…

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JupyterHub server spawning never completes; new JupyerHub admin – JupyterHub

Hello, I’ve recently started a position responsible for a JupyterHub installation as part of an HPC environment; the old team left without leaving much in the way of documentation, and I’ve never worked on JupyterHub before, so please bear with me. When launching JupyterHub, the system will stay on the…

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Issues with setting up z2jh with nbgrader – JupyterHub

Hello,I’m trying to deploy z2jh with nbgrader. here is the information about courses courses_data = [ { “name”:”course101″, “instructors”: [“instructor1”], “grader”: “grader-course101”, “docker_image_instructors”: “path/to/image”, “students”: [“student1”], “docker_image_students”: “path/to/image” }, { “name”: “course123”, “instructors”: [“instructor2”], “grader”: “grader-course123”, “students”: [“student1”], “docker_image_instructors”: “path/to/image”, “docker_image_students”: “path/to/image” } ] For each course I have a…

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Understanding Google Colab commands to running deep learning projects using Kaggle data API | by Sachinsoni | Dec, 2023

!mkdir -p ~/.kaggle!cp kaggle.json ~/.kaggle/ 1. About !mkdir -p ~/ .kaggle !mkdir -p ~/.kaggle: This line uses the mkdir command to create a directory named .kaggle in the user’s home directory (~). The -p option ensures that the command creates parent directories as needed. This command is used to make…

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Data-on-eks issues – Kubernetes – Ray

Hey Guys, I used the tf code provided at github.com/awslabs/data-on-eks/tree/main/ai-ml/jupyterhub to deploy jupyterhub on eks.While testing I get the below errors. Please guide how to resolve it? I am new to eks as well as jupyterhub. Based on the documentation at JupyterHub on EKS | Data on EKS, I expected…

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K-fold Cross Validation with PyTorch | by Francesco Franco | Dec, 2023

Machine learning models must be evaluated with a test set after they have been trained. We do this to ensure that models have not overfit and to ensure that they work with real-life datasets, which may have slightly deviating distributions compared to the training set. But in order to make…

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sagemath crashes on start (output in messagem body)

Package: sagemathVersion: 9.5-6Severity: importantFile: /usr/bin/sage Dear Maintainer, I can’t start sage on console. Starting it, I get the following: $ sage┌────────────────────────────────────────────────────────────────────┐│ SageMath version 9.5, Release Date: 2022-01-30 ││ Using Python 3.11.6. Type “help()” for help. │└────────────────────────────────────────────────────────────────────┘ Error in sys.excepthook:Traceback (most recent call last):File “/usr/lib/python3.11/pathlib.py”, line 1251, in is_dirreturn S_ISDIR(self.stat().st_mode)^^^^^^^^^AttributeError: ‘str’…

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Kaggle vs Paperspace – Finding the Optimal Platform for Data Science and Machine Learning

In this ever evolving field of A.I., Data Science, and Machine Learning, the choice of platform plays a crucial role in determining the best path to take on any real world problem. In this era with so many options, both Kaggle and Paperspace have become prominent spaces for providing necessary…

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AutoDock Vina 1.2.0: new docking methods, expanded force field, and Python bindings

J Chem Inf Model. Author manuscript; available in PMC 2023 Nov 28. Published in final edited form as: PMCID: PMC10683950 NIHMSID: NIHMS1947068 Jerome Eberhardt aDepartment of Integrative Structural and Computational Biology, Scripps Research, La Jolla, 92037, California, USA Diogo Santos-Martins aDepartment of Integrative Structural and Computational Biology, Scripps Research, La…

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How can I choose Jupyter kernel? – JupyterHub

When I use jupyter lab, there are several kernels I can choose: root@DESKTOP-L60P4Q8:~/arcta/live2# jupyter kernelspec list Available kernels: julia-1.9 /root/.local/share/jupyter/kernels/julia-1.9 mojo-jupyter-kernel /root/.local/share/jupyter/kernels/mojo-jupyter-kernel rust /root/.local/share/jupyter/kernels/rust python3 /usr/local/share/jupyter/kernels/python3 But when I use jupyterhub, there is only one kernel I can choose: How can I setup the jupyterhub_config, so that I can choose…

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Bioinformatics Institute, A*STAR hiring Computational Scientist in Singapore

Computational Scientist, Research Data Integration Group, Biomedical Datahub Division, Bioinformatics Institute (A*STAR)   About us Data science is an important component of biomedical and translational research, where data of multiple modalities are being constantly generated at unprecedented scale. The Research Data Integration group in the Biomedical Datahub Division of the…

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JupyterHub for my University with Nbgrader

Dear Muhammad, In case this helps, here is the configuration file for the image we are using on JupyterHub@Paris-Saclay, with Python, C, C++, R, SageMath, nbgrader (and libraries). Not C# or SQL though. Not much documentation either. Agregating all these in a single image is tough due to recurent version conflicts; maybe starting from…

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Running Google Colab or Kaggle Notebooks on VSCODE

Boost Your Coding Efficiency: Running Google Colab or Kaggle Notebooks on VSCODE Introduction What is Google Colab? What is Kaggle? Limitations of Notebook Environments The Need for an IDE Introduction to Colab Code Setting up Colab Code Running Colab Code in Google Colab Running Colab Code in Kaggle Troubleshooting Common…

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Unable to Use JupyterLab in Development Combining JupyterLab and JupyterHub – JupyterHub

Hello, thank you for providing such a wealth of resources in the community, which has made my development process quite smooth. Problem description:I’d like to inquire about integrating JupyterLab and JupyterHub for managing group-related tasks. I’ve downloaded both repositories locally and used pip install -e “.[dev,test]” within the JupyterLab project….

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Solved Below is data science salary 2023 from dataset

Below is data science salary 2023 from dataset kaggle: work_year experience_level employment_type job_title salary salary_currency salary_in_usd employee_residence remote_ratio company_location company_size 2023 SE FT Principal Data Scientist 80000 EUR 85847 ES 100 ES L 2023 MI CT ML Engineer 30000 USD 30000 US 100 US S 2023 MI CT ML Engineer…

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Rstudio Server not working for only one user – RStudio IDE

Hello I am an admin of an rstudio-server, I was asked to create a new account today everything seemed to work fine but this new user can’t use Rstudio inside the server. He logs in normally but when selecting new session and using Rstudio as editor the session wont start…

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From Pixels to Patterns Exploring CNN Architectures using PyTorch

Created with DALL-E 3 Welcome back to our journey through the fascinating world of Convolutional Neural Networks (CNNs)! Last week, in Part 1, we laid the foundation by exploring the basic concepts and components of CNNs. We jumped into the essence of convolutional layers, understood the significance of filters or…

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Top 5 Editors for R Programming: Boost Your Data Science Workflow

Are you diving into the world of R programming? Whether you’re a seasoned data scientist or just starting out, choosing the right editor is crucial for your success. Today, I’m here to guide you through the top 5 editors for R programming, each tailored to boost your coding efficiency and…

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Setting CORS when creating a user server on Kubernetes via REST API – JupyterHub

Hi, I am having trouble setting up CORS options on a single user server that are being spun up. The error I am seeing: Access to fetch at ‘<URL>’ from origin ‘http://localhost:3000’ has been blocked by CORS policy: Response to preflight request doesn’t pass access control check: No ‘Access-Control-Allow-Origin’ header…

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5 Free Courses to Master Machine Learning

Image generated with DALLE-3   Machine learning is becoming increasingly popular in the data space. But there’s often a notion that to become a machine learning engineer you need to have an advanced degree. This, however, is not completely true. Because skills and experience trump degrees, always. If you’re reading…

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google cloud platform – Get authenticated user from Vertex AI notebook

is there any way to get the user name who is currently in the Vertex AI Notebook? For example in Vertex AI Notebok if I do this: $ curl “http://metadata.google.internal/computeMetadata/v1/instance/service-accounts/default/email” -H “Metadata-Flavor: Google” I get: [email protected] Or if I do this using Python: import os user = os.environ.get(“USER”) print(f”USER =…

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Multiple Conda Environments – The Littlest JupyterHub

mwrowe November 21, 2023, 11:27pm 1 I am running a TLJH server on AWS. Some of the Jupyter notebooks I am hosting have very different requirements. Rather than adding all of those (potentially conflicting) requirements into the default base environment at /opt/tljh/user, I would like to make multiple environments available,…

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JupyterHub + KeyCloak auth and LDAP user groups – JupyterHub

Dimuk November 21, 2023, 12:51pm 1 Hi, I’ve successfully set up JupyterHub to login via KeyCloak and now it uses internal users and access (ie I create user from admin panel). My KeyCloak uses LDAP (FreeIPA) as user federation, so I want to create LDAP groups for users to access…

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JupyterHubSingleUser – Failed to connect to my Hub at http://127.0.0.1:8081/hub/api – JupyterHub – Jupyter Community Forum

After updating the base notebook image to Quay (base-notebook:2023-10-31) getting these connection errors in single user server spawn. Earlier used version jupyter/base-notebook:2023-04-14 this working without any errors. (python3.10 version used in working docker image) Environment:Used helm chart version “3.0.3” to deploy the 4.0.2 version of application on AWS EKS Cluster….

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How to Use R Programming in Google Colab | by Pierre DeBois | Nov, 2023

R can run in Google Colab. It’s Just A Matter of Switching Runtimes. Here’s how. R programming is separate from the IDE, so there are other options than RStudio. Google Collab is one of them. Most R programming developers, data analysts, and data scientists are used to seeing or programming…

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How I used a Jax regression model to predict on the hardness of minerals | by Tracyrenee | Nov, 2023

One of the great things about Kaggle competitions is the fact that they enable a person to develop his or her data science skills. The most recent Kaggle playground competition, being season 3 episode 25 is a regression problem that makes predictions on the hardness of minerals. The link to…

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Problems spawning single-user-servers (using groups) – JupyterHub

csee November 20, 2023, 10:35am 1 I have a JupyterHub 4.0 running, and it works fine with “normal” users.Using dockerspawner those users can spawn and use their own servers.But when I define a special group of users (that should have additional rights accessing a service), those users cannot spawn single-user-severs…

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kubernetes – Issues with respect to JupyterHub’s volume mount and custom-built images

We have JupyterHub setup on Kubernetes (AWS, kops, self-managed, z2jh.jupyter.org/en/stable/). The JupyterHub setup involves us using custom built images for our environments. We have some internal packages installed inside those images that are essential for our developers to work. Please note that these are legacy systems that cannot be modified…

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python 3.x – Can’t create Vertex AI (GCP) notebook with custom container

I’m trying to create a Vertex AI notebook using a Custom Container to train my torch model on GCP. I wasn’t able to correctly generate a notebook using this custom container and I can’t understand why. I tried to look at the documentation but wasn’t able to identify any pages…

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Intro to Reproducible Publications with Quarto

This is a two day workshop on Monday – Tuesday, Dec 11-12, 2023 on a hands-on on project organization and scientific authoring with RStudioParticipants will build on using their R data analysis skills in RStudio by learning how to create quarto documents that combine code, analysis, and narrative. RStudio makes…

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Create a Movie Recommendation Engine with Milvus and Python

Recommender systems or recommendation engines are information-filtering systems that aim to predict and suggest things users might be interested in. These items include products, services and content such as movies, books, music or news articles. There are various types of recommender systems, such as collaborative filtering, content-based filtering, hybrid recommendation…

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SageMath finally opening Jupyter notebooks with old files but doesn’t recognize sage commands

I would like to preface that I’m a beginner in computers and programming. To whomever helps, thank you for being patient with me. I went to get my mac (2023 M2 laptop) fixed for an audio problem. They ran a diagnostic test and all was good. Afterwords, Sage couldn’t connect…

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Nccl_external fails while trying to compile pytroch from source – torch.compile

Hello, I’m trying to compile pytorch from source and encountering the following build error. $ CC=gcc-10 CXX=g++-10 python setup.py develop … [5995/6841] Linking CXX executable bin/HashStoreTest Warning: Unused direct dependencies: /home/netfpga/research/collective/pytorch/build/lib/libc10.so /home/netfpga/anaconda3/envs/pytorch_base/lib/libmkl_intel_lp64.so.1 /home/netfpga/anaconda3/envs/pytorch_base/lib/libmkl_gnu_thread.so.1 /home/netfpga/anaconda3/envs/pytorch_base/lib/libmkl_core.so.1 /lib/x86_64-linux-gnu/libdl.so.2 /home/netfpga/anaconda3/envs/pytorch_base/lib/libgomp.so.1 [5996/6841] Performing build step for ‘nccl_external’ FAILED: nccl_external-prefix/src/nccl_external-stamp/nccl_external-build nccl/lib/libnccl_static.a /home/netfpga/research/collective/pytorch/build/nccl_external-prefix/src/nccl_external-stamp/nccl_external-build /home/netfpga/research/collective/pytorch/build/nccl/lib/libnccl_static.a cd /home/netfpga/research/collective/pytorch/third_party/nccl/nccl &&…

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visual studio code – JupyterHub vscode extension Error: Unable to determine base url of Jupyter Hub Server

I want to access jupyterHub from my vscode. I have my URL like this: <my-hub-url>/user/<my-hub-user-name>/?token=<my-token&gt;. This URL works just fine in Chrome if I click on it and the connection between VSCode & the hub is also working using other computer but on mine computer I got : Here are…

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Where To Get Datasets For Machine Learning

Introduction When it comes to machine learning, having relevant and high-quality datasets is crucial for training and testing algorithms. However, finding suitable datasets can sometimes be a daunting task. Fortunately, there are several resources available that offer a wide range of public datasets for machine learning purposes. In this article,…

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Trying to spawn pods in other namespace – Zero to JupyterHub on Kubernetes

Hello manics, thank you for your quick response and the tips on further debugging!In the default setting everything works fine, I can even use a profile as long as I dont use the kubespawner_override.namespace option. Here are the logs from the profile+namespace setting with the debug logging:Hub: [I 2023-11-16 19:58:45.827…

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How To Use Machine Learning In Python

Introduction Machine learning has revolutionized the way we approach problem-solving, data analysis, and decision-making. It is a branch of artificial intelligence that focuses on enabling computers to learn from data and improve their performance over time. With the growing availability of data and computing power, machine learning has become increasingly…

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math – SageMath finally opening Jupyter notebooks with old files but doesn’t recognize sage commands

I went to get my mac (2023 M2 laptop) fixed for an audio problem. They ran a diagnostic test and all was good. Afterwords, Sage couldn’t connect to localhost on any browser. I checked proxy settings etc and nothing. I uninstalled and reinstalled Sage. Now it can open all of…

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google cloud vertex ai – cannot import name ‘aiplatform’ from ‘google_cloud_pipeline_components’

Working in Vertex on a Jupyter lab, I’m trying to import some libraries : import kfp from kfp import compiler, dsl from kfp.dsl import component, pipeline, Artifact, ClassificationMetrics, Input, Output, Model, Metrics from google.cloud import aiplatform from google_cloud_pipeline_components import aiplatform as gcc_aip from typing import NamedTuple But doing so I…

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Kaggle versus Gradient / other advice to the “younger” you? – Part 1 2022

kronsteen (Ashish M) November 17, 2023, 5:56am 1 Just stepping in to the course. I’ve watched the first video, read the first course pages and feel a bit overwhelmed by the number of links as well as the choices. Appreciate a couple of pointers: (1) We’re told: Instead of Kaggle,…

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Bristol Myers Squibb hiring Summer 2024 – Bioinformatics – Informatics and Predictive Science (IPS) Internship in Seattle, WA

Working with UsChallenging. Meaningful. Life-changing. Those aren’t words that are usually associated with a job. But working at Bristol Myers Squibb is anything but usual. Here, uniquely interesting work happens every day, in every department. From optimizing a production line to the latest breakthroughs in cell therapy, this is work…

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01 Pytorch Basics?action=login – Notebook by Faizudeen Olanrewaju Kajogbola (faaizz)

How to run the code This tutorial is an executable Jupyter notebook hosted on Jovian (don’t worry if these terms seem unfamiliar; we’ll learn more about them soon). You can run this tutorial and experiment with the code examples in a couple of ways: using free online resources (recommended) or…

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Solved Use the following Coronavirus Lat/Long dataset

Use the following Coronavirus Lat/Long dataset (available at Kaggle.com). It contains an outlook on the data science job market in the U.S. in 2018 August. Create a Jupyter notebook file that includes Python code to do the following: Read the data. Explore the dataset, make sure there are no missing…

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Software Engineer – open source

Who we are Quansight has its roots in the Python data science community. Our founders have had significant involvement in creating and maintaining NumPy, SciPy, Jupyter, Spyder, Dask, Conda, Numba, and other projects, as well as PyData NumFOCUS, and Anaconda. Our mission is to connect companies to open-source communities to…

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Download JupyterHub 2023.10.1003012305 Extension (Vsix File) for VS Code

You are about to download the JupyterHub Vsix v2023.10.1003012305 file for Visual Studio Code 1.83.0 and up: JupyterHub, Support for connecting to Jupyter Hub in VS Code along with the Jupyter Extension … Please note that the JupyterHub Vsix file v2023.10.1003012305 on VsixHub is the original file archived from the…

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python – JetBrains DataSpell how to show full output for Jupyter cell

I recently tried using Jupyter via DataSpell and faced the following problem: I cannot preview the full text output of a Jupyter cell if it is larger than ~10 lines. E.g. on the screenshot below I print lines from 0 to 19 and only lines 10-19 are shown: I have…

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Product Manager (DataSpell) – DataSpell

Product Manager (DataSpell) At JetBrains, code is our passion. Ever since we started, back in 2000, we have strived to make the strongest, most effective developer tools on earth. By automating routine checks and corrections, our tools speed up production, freeing developers to grow, discover and create. DataSpell is a…

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Connecting to a Jupyter Server instance started remotely by Jupyter Hub via Python – JupyterHub

Hi, I am trying to connect to a Jupyter Server instance in order to execute Python code on the IPykernel. The Jupyter Server instance I am trying to connect to is on a remote machine. I noticed that I can connect to a local Jupyter instance using the connection_info and…

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Data Scientist, Marketing And Growth At Moniepoint Inc. (Formerly TeamApt Inc.) November, 2023

Never pay for any CBT, test or assessment as part of any recruitment process. When in doubt, contact us Your Opportunity and Mission  We are looking for talented and passionate Data Scientist to join the Growth team. Data science and optimization are key drivers for Moniepoint’s business growth and the…

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Decoding the Best IDE for You in 2024

Navigate the coding landscape with our comprehensive comparison of RStudio vs VSCode. Uncover the strengths, weaknesses, and unique features of each IDE to make an informed choice for your programming needs. Explore the showdown between RStudio and VSCode to optimize your coding experience. Embarking on a coding venture often feels…

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Jupyterhub throws 403 error, when I open a notebook without any actions – JupyterHub

Thanks for your reply! Here is my custom authentication code class CUSTOMAuthenticator(Authenticator): “””Authenticator process 1. Get CUSTOM user’ cookie who has benn logined 2. Call CUSTOM api to check this cookie’s validity 3. Check api response, if pass will set user info to jupyterhub, if not will return None “””…

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JupyterHub on Kubernetes cannot failed to cull user pods

I implemented JupyterHub using a Helm chart on a local Kubernetes cluster on VMware virtual machines. I want to cull users after they have been inactive for a while, but it seems not to work. This error log from the hub pod (pod named hub-545895f988-vmj2k) might be related: [W 2023-11-09…

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Introducing PyTorch for Generative Neural Networks in Python | by Gabe Araujo, M.Sc. | Nov, 2023

Hey there, fellow Python enthusiasts! Today, I want to dive into the exciting world of generative neural networks and show you how to use PyTorch to create your very own generative models. Generative neural networks have gained immense popularity in recent years for their ability to generate new data that…

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jupyter notebook – Automation of PV and creation of folders in NFS server for Jupyterhub on Kubernetes

I have used the following GitHub link for jupyterhub installation:github.com/bitnami/charts/tree/main/bitnami/jupyterhub My problem is while user tries to log in jupyterhub it will create PVC for each user from helm side and we need to create PV and NFS folders from our side. Doing this process for each user is not…

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PyTorch Model to detect Pneumonia using Snowpark Container Service and Snowflake ML Features | by Karuna Nadadur | Snowflake | Nov, 2023

Author : Karuna Nadadur Co Author : Murali Gandhirajan Healthcare Delivery is undergoing rapid changes and evolution as health systems and clinics adopt digital technologies to effectively serve patients. As digital technologies get widely deployed in the patient care delivery ecosystem, it generates vast amounts of patient data. Most of…

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Real-time collaboration for jupyterhub – Zero to JupyterHub on Kubernetes

Hi there,I’ve been playing around with RTC extension on jupyterhub recently and I’ve been stuck at creating-collaboration-accounts for a while. It mentions This configuration code runs when jupyterhub starts up, so I included the example code block under hub.extraConfig.’myConfig.py’, then I got this error: TypeError: ‘LazyConfigValue’ object is not subscriptable….

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Image Segmentation with U-Net in PyTorch: The Grand Finale of the Autoencoder Series

Access the code to this tutorial and all other 500+ tutorials on PyImageSearch Enter your email address below to learn more about PyImageSearch University (including how you can download the source code to this post): What’s included in PyImageSearch University? Easy access to…

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