Tag: nginx

Openapi.simfy.net Review: Legit or Scam?

Last Check: 20, January 2024 Check Openapi.simfy.net review to know whether it is a real or fake website. Get a detailed overview and understand Openapi.simfy.net legit or a scam. Openapi.simfy.net is an average website! Openapi.simfy.net has a safety score of 75 out of 100. The safety score is based on…

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400 : Bad Request OAuth state missing from cookies – JupyterHub

I have setup two services of jupyterhub on single server which are running on different portroot@e2e-94-254:~# netstat -lntup | grep nodetcp 0 0 0.0.0.0:8000 0.0.0.0:* LISTEN 683069/nodetcp 0 0 0.0.0.0:20000 0.0.0.0:* LISTEN 682679/nodetcp 0 0 127.0.0.1:20002 0.0.0.0:* LISTEN 682679/nodetcp 0 0 127.0.0.1:8001 0.0.0.0:* LISTEN 683069/node I have setup nginx as…

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Web Technologies used by Pytorch-nlp.com

Overview of web technologies used by Pytorch-nlp.com. Website Background PyTorch 自然语言处理 PyTorch 自然语言处理文档包括自然语言处理(NLP)和深度学习,涵盖这两个领域的重要主题。 Description on Homepage not ranked Popularity rank MkDocs is a static site generator that’s geared towards building project documentation. MkDocs Static websites don’t use any server-side programming language for generating web pages, but deliver fixed content which…

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Real-time collaboration for jupyterhub – Zero to JupyterHub on Kubernetes

Hi there,I’ve been playing around with RTC extension on jupyterhub recently and I’ve been stuck at creating-collaboration-accounts for a while. It mentions This configuration code runs when jupyterhub starts up, so I included the example code block under hub.extraConfig.’myConfig.py’, then I got this error: TypeError: ‘LazyConfigValue’ object is not subscriptable….

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shiny server running but shiny app does not spawn up from rstudio run button

I have recently launched a new ubuntu 20.04 server on the cloud, installed R, Rstudio and shiny server (all open source). The rstudio is accessible on a remote browser connection. But somehow I am unable to make a simple shiny app to spawn up. Even the sample app /sample-apps/hello/ does…

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AI regulation arrives, SBF goes down and gen AI lifts earnings outlooks

That was quick: It’s a wrap for Sam Bankman-Fried, whose jury took only about four hours to decide he’s guilty on all counts. Now, pending an appeal, the main question is how long he’ll be behind bars. SBF’s conviction was the capper for a busy week. Regulations finally came to…

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kubernetes – Load balancing between Slurm clusters

What strategy of load balancing in k8s would be recommended between Slurm (think SGE) clusters? The reason I raise this is Slurm has a Pythonic API governing the queuing system. Information can freely pass from the queuing system to the load balancer in Nginx (k8s) via the API. The load…

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Jupyterhub helm chart 3.1.0+k8s 1.27.6: User pods not spawning got TimeoutError – Zero to JupyterHub on Kubernetes

Context k8s: v1.27.6helm: v3.13.0jupyterhub helm chart: 3.1.0 # configs.yaml proxy: service: type: NodePort ingress: enabled: true annotations: kubernetes.io/ingress.class: nginx nginx.ingress.kubernetes.io/proxy-body-size: 512m cert-manager.io/cluster-issuer: letsencrypt-prod hosts: – xxxxxxxxxxxxxxxxxxxxxxxx tls: – hosts: – xxxxxxxxxxxxxxxxxxxxxxxx secretName: codebook-tls singleuser: startTimeout: 300 debug: enabled: true Deployment seems to work fine: NAME READY STATUS RESTARTS AGE continuous-image-puller-2v74w…

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Is there a maintenance mode? – JupyterHub

Hello Together, Is there a way to put Jupyterhub into maintenance mode?How do I prevent logged in users from accessing all pages except the login page for a certain period of time? Because there is a message that maintenance is currently taking place.There also seems to be no way to…

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Login problems with Posit Connect

Today users reported trying to login to a Posit Connect server was returning an error message saying “There was a problem logging in. Please try again.” It’s running on a Linux server using SAML authentication to our campus Shibboleth instance, and has been working for some time. In /var/log/rstudio-connect.log, I’m…

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Full Stack Web Developer – Hinxton, Cambridgeshire, United Kingdom – EMBL

Description We are looking for an enthusiastic Full Stack Developer to join the EMBL-EBI Web Development team in our mission to create scientific web services that are aesthetically pleasing, useful, usable, and empower our employees and scientists worldwide to solve the biggest challenges in biology. The team provides a centralised…

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LanzaTech hiring Software Engineer (Bioinformatics) – Hybrid in Skokie, Illinois, United States

Welcome to the Post Pollution Future with LanzaTech About us:LanzaTech was founded on the belief that we have enough carbon above ground to make everything we need. Through our biorecycling technology, we transform carbon into sustainable raw materials, replacing the need for virgin fossil carbon in consumer goods and transport…

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Jupyterhub Pods all going to only one node on the cluster – Zero to JupyterHub on Kubernetes

tony September 1, 2023, 2:16pm 1 Hello All,Need help figuring out why my deployment is sending all pods to the same node. I tested the cluster by deploying 28 nginx pods and they were evenly spread across the cluster. I tested bith v2.0.0 and v3.0.1 My config is: debug:enabled: true…

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JupyterHub and another web application behind Nginx – JupyterHub

Hi! I have installed TLJH on a server, along with a web application (Django). I am now trying to run both TLJH and the web application behind a Nginx reverse proxy on the same domain name. TLJH will be accessible with a different location (e.g. my-domain/jupyter). Currently, only the web…

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How to Change Swagger UI URL Defauth Path

Swagger UI is a great tool for visualizing and interacting with OpenAPI specs. As you work with Swagger UI, you’ll notice URLs play an important role in configuring and accessing the API documentation. In this post, we’ll demystify Swagger UI URLs to help you use them more effectively. What is…

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Full Stack Web Developer at European Molecular Biology Laboratory (EMBL)

Advertised Grade-Grading: Grade 5 – 6 (monthly salary starting at £3,090 – £3,456 after tax) plus other paid benefits depending on personal circumstances Contract Duration-Length of Time (years/months): 3 years (renewable upto 9 years) About the team/job We are looking for an enthusiastic Full Stack Developer to join the EMBL-EBI…

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Process-exporter and PMM – PMM 2.x

Description: Unable to add External process Monitor Steps to Reproduce: Install pmm and standard YUM process that works properly as well as mysql monitor All agents and items are being monitored properly. Install of process-exporter Reason: I want to be able to monitor the amount of items like httpd processes…

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Content-Security-Policy (IFrame embeding) not working in new version – JupyterHub

whale July 1, 2023, 10:34pm 1 Bug description Content-Security-Policy settings are not respected in new version of Jupyter Hub.Following screen capture is demonstrating how same settings worked in JupyterHub v1.4.0 and in v1.5.1 it doesn’t work any more: TechSmith Screencast 2023-05-29_11-35-14 TechSmith – Show what you know In order to…

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Running RStudio in own/local Galaxy instance – usegalaxy.org support

Hello,I successfully managed to setup my own local Galaxy instance. Now I am trying to integrate the interactive tools starting with RStudio. After adding it to the tool_conf.xml and starting RStudio in Galaxy, I get the following error: sed: can’t read /etc/services.d/nginx/run: No such file or directory chmod: changing permissions…

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JupyterHub in Docker and Nginx on host: Websocket problem – JupyterHub

I’m using the official Nginx proxy settings, including websocket configuration as presented in the official documentation: jupyterhub.readthedocs.io/en/stable/reference/config-proxy.html#nginx Server starts, and the Jupyter main page loads, however, I keep getting Websocket errors in the Chrome developer console: WebSocket connection to ‘ws://localhost/api/events/subscribe?token=8acfafc93ec11a9acfeeb21f680d8008a4a0def370750ace’ failed: It looks like the offiicial Nginx config no longer…

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openapi – How to convert a multi-file open api 2.0 definition to 3.0 spec definition without changing the file structure

I have multi-file open api 2.0 definition, main file is called main_openapi.yaml that contains the top level fields and further details are in separate files. I want to convert this definition to 3.0 spec definition without changing the folder structure or combining them in to one yaml file. Below are…

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Codon Compiler For Python Is Fast – but With Some Caveats

For 16 years, Rik Farrow has been an editor for the long-running nonprofit Usenix. He’s also been a consultant for 43 years (according to his biography at Usenix.org) — and even wrote the 1988 book Unix System Security: How to Protect Your Data and Prevent Intruders. Today Farrow stopped by…

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How to Auto-Create Users for SimpleLocalProcessSpawner on 3rd Party Login alongside Conda? – JupyterHub

Context:I am trying to setup JupyterHub (on a single EC2 server, HTTPS is provided via a reverse Nginx proxy URL) such that a small number of users authenticate with a 3rd party Solution (KeyCloak) and upon redirect back to the JupyterHub/Lab will automatically have a user created for them locally….

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How to improve security in nginx bloc for jupyterhub – discuss

arnome April 26, 2023, 3:47pm 1 Hi everyone, I have set up a jupyterhub server with nginx as reverse proxy. I start making the nginx bloc configuration file using the one give in the official documentation and I add some rules to « harding nginx ». This is the current…

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MGnify Website Developer at European Molecular Biology Laboratory (EMBL)

Advertised Grade-Grading: Grade 5 (monthly salary starting at £2,882 after tax) or Grade 6 (monthly salary starting at £3,224) + other paid benefits About the team/job MGnify is EMBL-EBI’s microbiome sequence data analysis resource, which performs the archiving, assembly and analysis of metagenomics data. As the number and diversity of…

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Jupyterhub behind ingress controller – Zero to JupyterHub on Kubernetes

I am trying to host a jupyterhub on kubernetes . I have deployed the helm chart and set the ingress resource . when i visit the site loads properly as wellthe websocket connection fails. i read on the nginx ingress controller docs that websocket is supported out of the box.I…

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Development & Operations Systems Administrator, The VEuPathDB Bioinformatics Resource Center

Development & Operations Systems Administrator, The VEuPathDB Bioinformatics Resource Center University Overview The University of Pennsylvania, the largest private employer in Philadelphia, is a world-renowned leader in education, research, and innovation. This historic, Ivy League school consistently ranks among the top 10 universities in the annual U.S. News & World…

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2 Server Management | RStudio Server Professional Edition 1.4.1103-3

Core Administrative Tasks Configuration Files RStudio Server uses several configuration files all located within the /etc/rstudio directory. Configuration files and folders include: rserver.conf Core server settings rsession.conf Settings related to individual R sessions notifications.conf Notifications to be delivered to user sessions Pro logging.conf Configuration of the logging system including logger…

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Logged in user not getting default scopes – JupyterHub

satra February 20, 2023, 10:15am 1 The primary issue is that the logged in user is unable to see launch progress and unable to delete their own server. As such scopes seem to be off. The jupyterhub is launched using a helm chart (version: 2.0.1-0.dev.git.6012.h458d566c helm call). Here is the…

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needs dynamic library with libcurl, libssh2 and mbedtls

[Buildroot] [PATCH v2, 1/1] package/libmodsecurity: needs dynamic library with libcurl, libssh2 and mbedtls * [Buildroot] [PATCH v2, 1/1] package/libmodsecurity: needs dynamic library with libcurl, libssh2 and mbedtls @ 2023-02-19 17:19 Fabrice Fontaine 0 siblings, 0 replies; only message in thread From: Fabrice Fontaine @ 2023-02-19 17:19 UTC (permalink / raw)…

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JupyterHub in Docker and Nginx on host: kernel problem – JupyterHub

jby February 16, 2023, 3:51pm 1 Hello, I tried to setup a dockerized JupyterHub and access it through Nginx reverse-proxy on the host.But, alas kermels are not functionals. If the same docker container is bound directly to an open port of the host, everything is ok.If the same docker container…

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accessing rstudio server using domain instead of IP address returns page not found – R Admins

I have a simple problem of accessing the rstudio server remotely using my domain name. The server is accessible using the IP address i.e. x.x.x.x:8787 but as soon as I use the domain abc.net/rstudio there is page not found message. I can confirm the shinyapp1 is accessible with the below…

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Blocking Cross Origin API request – JupyterHub

Hi there, I have a problem for the JupyterHub.I think it is the cross origin,but i have tried everything didn’t work. Blocking Cross Origin API request. Referer: kcalpt.sysx.jsou.edu.cn/hub/spawn-pending/awuqiang?next=%2Fhub%2Fuser%2Fawuqiang%2Ftree%3F, Host: 172.16.253.15:8600/hub/ Conf:runtime_dir = os.path.join(“/home/jupyter/datas/jupyterhub”)c.JupyterHub.allow_named_servers = Truec.JupyterHub.ip = “0.0.0.0”c.JupyterHub.port = 8600c.JupyterHub.db_url = pjoin(runtime_dir, “jupyterhub.sqlite”)c.Spawner.cmd = [‘/home/jupyter/pyenv/jupyterhub/bin/jupyterhub-singleuser’]c.JupyterHub.authenticator_class = ‘jupyterhub.auth.PAMAuthenticator’c.Authenticator.admin_users = [“jupyter”]c.Spawner.notebook_dir = “~/notebooks”c.Spawner.args…

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Action is not authorized with current scopes; requires any of [read:servers] – JupyterHub

Hi all,I come from here.As it seems the error is coming from an strange behaviour with Traefik, I have decided to use nginx as proxy.However after configuring it, after log-in the server is stuck in “Your server is starting up” and the progress bar is not moving. If I reload,…

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[Buildroot] [git commit branch/2022.02.x] package/libmodsecurity: needs dynamic library with libcurl and mbedtls

[Buildroot] [git commit branch/2022.02.x] package/libmodsecurity: needs dynamic library with libcurl and mbedtls – Peter Korsgaard From: Peter Korsgaard <peter@korsgaard.com> To: buildroot@buildroot.org Subject: [Buildroot] [git commit branch/2022.02.x] package/libmodsecurity: needs dynamic library with libcurl and mbedtls Date: Tue, 19 Jul 2022 18:35:54 +0200 [thread overview] Message-ID: <20220719162323.01D1283DF5@busybox.osuosl.org> (raw) commit: git.buildroot.net/buildroot/commit/?id=2d021a7e7163d13b604d508602288e7190ab63dc branch: git.buildroot.net/buildroot/commit/?id=refs/heads/2022.02.x

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Filtering outgoing container traffic – General Discussions

melhayany (Melhayany) April 12, 2022, 10:12pm #1 Hello Docker Community, I am facing a networking issue with my application to run JupyterHub using Docker containers. To give you a bit of context. I created a virtual machine, on it: port 2022 (ssh) served by my server, port 443 (https) served…

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CORS issues behind nginx ingress after updating to JupyterHub 2.1.1 – JupyterHub

Hi there, I noticed multiple issues after upgrading to JupyterHub 2.1.1 from 2.0.0. I stopped seeing spawn progress when starting the singleuser server. Logs: [I 2022-03-04 20:57:47.436 JupyterHub log:189] 302 GET /hub/spawn -> /hub/spawn-pending/konstantin.taletskiy@labshare.org (konstantin.taletskiy@labshare.org@192.168.15.108) 1006.02ms [I 2022-03-04 20:57:47.524 JupyterHub pages:405] konstantin.taletskiy@labshare.org is pending spawn [I 2022-03-04 20:57:47.528 JupyterHub log:189]…

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JupyterHub on Host Network with HTTPS failing with 503: Service Unavailable – Zero to JupyterHub on Kubernetes

Hi All, Hope everyone is well! I have been working on a small project for an internal network to get JupyterHub running. I have gotten pretty far in the development, but now stuck on getting HTTPS working with the host network option. JupyterHub is running on internal VMs and thus…

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