Tag: OMA

OMA speed

OMA speed 0 Is there any way to speed up the execution without using parallel processes? The parallel execution does not run well on the system I access. My goal is to compute orthologs between two species, one having 55,725 transcripts, and the other 91.249. It is taking several weeks….

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HOG without numbering in the genome of the ancestor reconstructed using the pyHAM

Dear colleagues, Recently I successfully complete OMA standalone run and now I am trying to analyze results using the pyHam python package. The main task for me is to reconstruct the genome of the ancestor of the analyzed species. After executing the following commands, I get information that in the…

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