Tag: pData

[PATCH] drm/bridge: ti-sn65dsi86: Avoid possible buffer overflow * [PATCH] drm/bridge: ti-sn65dsi86: Avoid possible buffer overflow @ 2023-06-06 7:55 Su Hui 2023-06-06 15:28 ` Doug Anderson 0 siblings, 1 reply; 4+ messages in thread From: Su Hui @ 2023-06-06 7:55 UTC (permalink / raw) To: Douglas Anderson, Andrzej Hajda, Neil Armstrong,…

Re: [PATCH 1/5] uio: Add hv_vmbus_client driver – kernel test robot From: kernel test robot <lkp@intel.com> To: Saurabh Sengar <ssengar@linux.microsoft.com>, kys@microsoft.com, haiyangz@microsoft.com, wei.liu@kernel.org, decui@microsoft.com, mikelley@microsoft.com, gregkh@linuxfoundation.org, linux-kernel@vger.kernel.org, linux-hyperv@vger.kernel.org Cc: oe-kbuild-all@lists.linux.dev Subject: Re: [PATCH 1/5] uio: Add hv_vmbus_client driver Date: Sun, 4 Jun 2023 10:05:10 +0800 [thread overview] Message-ID: <202306040910.13oLufQd-lkp@intel.com> (raw)…

So I’ve tried running the following code from a panel dataset of weekly hospital observations and I’m getting a recurrent error, which I believe is driven by plm: finalprepostdataset2<-finalprepostdataset%>% filter(state==”AL”|state==”GA”| state==”NC”| state==”SC”|state==”MI”|state==”FL”)%>% group_by(year, week) %>% mutate(group = cur_group_id())%>% ungroup() finalprepostdataset2<-unique(finalprepostdataset2, by=c(“hospital_pk”, “group”)) finalprepostdataset_sp<-st_as_sf(x=finalprepostdataset2, crs = “+proj=longlat +datum=WGS84 +ellps=WGS84 +towgs84=0,0,0”) finalprepostdataset_sp…

[PATCH] When ‘mcf_edma’ is allocated, some space is allocated for a flexible array at the end of the struct. ‘chans’ item are allocated, that is to say ‘pdata->dma_channels’. * [PATCH] When ‘mcf_edma’ is allocated, some space is allocated for a flexible array at the end of the struct. ‘chans’ item…

[PATCH 1/3] w1: gpio: Don’t use platform data for driver data – Uwe Kleine-König From: “Uwe Kleine-König” <u.kleine-koenig@pengutronix.de> To: Krzysztof Kozlowski <krzysztof.kozlowski@linaro.org> Cc: Rob Herring <robh@kernel.org>, Greg Kroah-Hartman <gregkh@linuxfoundation.org>, linux-kernel@vger.kernel.org, Philipp Marek <philipp@marek.priv.at> Subject: [PATCH 1/3] w1: gpio: Don’t use platform data for driver data Date: Thu, 25 May 2023…

[PATCH 3/3] w1: gpio: rename pointer to driver data from pdata to ddata – Uwe Kleine-König From: “Uwe Kleine-König” <u.kleine-koenig@pengutronix.de> To: Krzysztof Kozlowski <krzysztof.kozlowski@linaro.org> Cc: Rob Herring <robh@kernel.org>, Greg Kroah-Hartman <gregkh@linuxfoundation.org>, linux-kernel@vger.kernel.org, Philipp Marek <philipp@marek.priv.at> Subject: [PATCH 3/3] w1: gpio: rename pointer to driver data from pdata to ddata Date:…

package sun.awt.X11; import jdk.internal.misc.Unsafe; import sun.util.logging.PlatformLogger; public class XVisibilityEvent extends XWrapperBase { private Unsafe unsafe = XlibWrapper.unsafe; private final boolean should_free_memory; public static int getSize() { return 48; } public int getDataSize() { return getSize(); } long pData; public long getPData() { return pData; } public XVisibilityEvent(long addr) { log.finest(“Creating”);…

[PATCH net] amd-xgbe: fix the false linkup in xgbe_phy_status * [PATCH net] amd-xgbe: fix the false linkup in xgbe_phy_status @ 2023-05-24 17:49 Raju Rangoju 0 siblings, 0 replies; only message in thread From: Raju Rangoju @ 2023-05-24 17:49 UTC (permalink / raw) To: netdev Cc: davem, edumazet, kuba, pabeni, Shyam-sundar.S-k,…

Re: [PATCH v2 4/8] KVM: x86: Add helper to get variable MTRR range from MSR index – Huang, Kai From: “Huang, Kai” <kai.huang@intel.com> To: “pbonzini@redhat.com” <pbonzini@redhat.com>, “Christopherson,, Sean” <seanjc@google.com> Cc: “kvm@vger.kernel.org” <kvm@vger.kernel.org>, “guoke@uniontech.com” <guoke@uniontech.com>, “linux-kernel@vger.kernel.org” <linux-kernel@vger.kernel.org>, “haiwenyao@uniontech.com” <haiwenyao@uniontech.com> Subject: Re: [PATCH v2 4/8] KVM: x86: Add helper to get variable…

[PATCH v2 4/8] KVM: x86: Add helper to get variable MTRR range from MSR index – Sean Christopherson From: Sean Christopherson <seanjc@google.com> To: Sean Christopherson <seanjc@google.com>, Paolo Bonzini <pbonzini@redhat.com> Cc: kvm@vger.kernel.org, linux-kernel@vger.kernel.org, Kai Huang <kai.huang@intel.com>, Wenyao Hai <haiwenyao@uniontech.com>, Ke Guo <guoke@uniontech.com> Subject: [PATCH v2 4/8] KVM: x86: Add helper to…

PDATA (PDATA) Price Prediction 2023 According to the PDATA forecast price and technical analysis, in 2023 the PDATA price is expected to cross an average price level of $0.00055603, the expected minimum price value of PDATA by the end of the current year should be $0.00053846. Moreover PDATA can reach…

1 // SPDX-License-Identifier: GPL-2.0-only 2 /* 3 * Toshiba TC6387XB support 4 * Copyright (c) 2005 Ian Molton 5 * 6 * This file contains TC6387XB base support. 7 */ 8 9 #include <linux/module.h> 10 #include <linux/platform_device.h> 11 #include <linux/clk.h> 12 #include <linux/err.h> 13 #include <linux/mfd/core.h> 14 #include <linux/mfd/tmio.h> 15…

How much is 1 PDATA BSC in US Dollar? According to the CoinBrain calculator, 1 PDATA is $0.000000109735. We used the current 0.000000109735 Currency Exchange Rate. Last updated on May 7, 2023, 14:18 UTC. Where can I learn more about PDATA BSC? You can find all the important information about…

Transcribed image text: 6.- Consider the parallel port illustrated in the figure below: (a) Find Boolean logic expressions to generate the active high sigals PSTATUS and PDATA when the address bus contents are $A000 and $A001, respectively. Use the fewest lines possible. No addresses outside the range $A000−$A7FF should assert…

From Linus Walleij <> Date Mon, 01 May 2023 11:05:21 +0200 Subject [PATCH 1/3] ARM/gpio: Push OMAP2 quirk down into TWL4030 driver The TWL4030 GPIO driver has a custom platform data .set_up()callback to call back into the platform and do misc stuff suchas hog and export a GPIO for WLAN…

From Linus Walleij <> Date Mon, 01 May 2023 11:05:22 +0200 Subject [PATCH 2/3] ARM: omap2: Get USB hub reset GPIO from descriptor This switches the USB hub GPIO reset line handling in theOMAP2 pdata quirks over to using GPIO descriptors to avoid usingthe global GPIO numberspace.Since the GPIOs are…

I’ve downloaded the CEL files from GSE154619 and want to run a DE test for multiple contrasts. In essence, this data has two treatments(drug vs control) in two tissues. Here’s my code: suppressPackageStartupMessages({ library(affy) library(oligo) library(limma) library(pd.clariom.s.mouse) library(clariomsmousetranscriptcluster.db) library(biomaRt) }) data_dir <- ‘./data/DpQ/GSE154619/’ metadata <- data.frame( treatment = factor(ifelse(grepl(‘DQ’, all_files),…

The OMAP2/3 has a few platform data quirks using the legacy <linux/gpio.h> API and the associated global GPIO numberspace. Since we started to use dynamic assignment of the OMAP GPIO base this will not work, let’s just rewrite and decomission these bad habits. Signed-off-by: Linus Walleij <linus.walleij@linaro.org> — Linus Walleij…

[PATCH v6 07/13] coresight: Store pointers to connections rather than an array of them – James Clark From: James Clark <james.clark@arm.com> To: coresight@lists.linaro.org, quic_jinlmao@quicinc.com, mike.leach@linaro.org, suzuki.poulose@arm.com Cc: James Clark <james.clark@arm.com>, Leo Yan <leo.yan@linaro.org>, Alexander Shishkin <alexander.shishkin@linux.intel.com>, Mathieu Poirier <mathieu.poirier@linaro.org>, Greg Kroah-Hartman <gregkh@linuxfoundation.org>, linux-arm-kernel@lists.infradead.org, linux-kernel@vger.kernel.org Subject: [PATCH v6 07/13] coresight: Store…

I am trying to improve my test program about Direct3D 11 in 2D, without any additional library (see stackoverflow.com/q/71772545/688348). Now, what I want to do is to rotate the content (client) area of the window. The GDI part is working, but not the D3D one. The function d3d_resize() takes an…

illuminaHumanv2.db returning NA for all Illumina probe ID to gene symbol conversion 0 I have downloaded a miRNA expression dataset from NCBI GEO (GSE25631) to study differential gene expression and perform other analyses. As mentioned in GEO, this profiling was performed on GPL8179 Illumina Human v2 MicroRNA expression beadchip. Accordingly,…

Hello Kah Jing Lee, The patch 1b4394c5d731: “firmware: stratix10-svc: extend svc to support RSU feature” from Jul 11, 2022, leads to the following Smatch static checker warning: drivers/firmware/stratix10-svc.c:627 svc_normal_to_secure_thread() warn: ‘pdata->command == 10’ ‘false’ implies ‘pdata->command != 10’ is ‘true’ drivers/firmware/stratix10-svc.c 383 static int svc_normal_to_secure_thread(void *data) 384 { 385 struct…

[PATCH 1/2] dt-bindings: regulator: Add dt property * [PATCH 1/2] dt-bindings: regulator: Add dt property @ 2023-04-18 14:50 Naresh Solanki 2023-04-18 14:50 ` [PATCH 2/2] regulator: userspace-consumer: Multiple regulators Naresh Solanki 2023-04-20 0:01 ` [PATCH 1/2] dt-bindings: regulator: Add dt property Zev Weiss 0 siblings, 2 replies; 4+ messages in…

Hello everyone, I am trying to make a comparison between two functions pData and t1 in order to turn on an actuator (relay) but I am having this problem I know that is because I cannot combine two types of functions but I wanna know what can I change. Thanks…

[PATCH] soc: ti: smartreflex: Simplify getting the opam_sr pointer * [PATCH] soc: ti: smartreflex: Simplify getting the opam_sr pointer @ 2022-10-12 14:00 Uwe Kleine-König 2022-12-19 21:41 ` Uwe Kleine-König 2023-04-12 14:25 ` Uwe Kleine-König 0 siblings, 2 replies; 6+ messages in thread From: Uwe Kleine-König @ 2022-10-12 14:00 UTC (permalink…

Hello, i would like to run spatial autoregressive lag model using lagsarlm. I generate this data and try to run the regression: library(splm) # tady si nageneruji nejaka random data set.seed(123) id <- rep(1:10, each = 10) time <- rep(1:10, times = 10) income <- rnorm(1000, mean = 50, sd…

Instance structure for the floating-point bilinear interpolation function. More… #include <arm_math.h> Detailed Description Instance structure for the floating-point bilinear interpolation function. Definition at line 1933 of file arm_math.h. Member Data Documentation uint16_t arm_bilinear_interp_instance_f32::numCols number of columns in the data table. Definition at line 1936 of file arm_math.h. uint16_t arm_bilinear_interp_instance_f32::numRows number…

Provide the correct and verified code for the following in R, the GEO number is GSE16015 1)Download any microarray data of interest from GEO with at least 100 samples and two classes. 2) After performing EDA and preprocessing, list the data attributes, including pdata and fdata. 3) State the effects…

[PATCH v3 02/13] coresight: Change name of pdata->conns – James Clark From: James Clark <james.clark@arm.com> To: coresight@lists.linaro.org, quic_jinlmao@quicinc.com, mike.leach@linaro.org, suzuki.poulose@arm.com Cc: James Clark <james.clark@arm.com>, Mathieu Poirier <mathieu.poirier@linaro.org>, Leo Yan <leo.yan@linaro.org>, Alexander Shishkin <alexander.shishkin@linux.intel.com>, Maxime Coquelin <mcoquelin.stm32@gmail.com>, Alexandre Torgue <alexandre.torgue@foss.st.com>, linux-arm-kernel@lists.infradead.org, linux-kernel@vger.kernel.org, linux-stm32@st-md-mailman.stormreply.com Subject: [PATCH v3 02/13] coresight: Change name of…

[PATCH net v4] smsc911x: only update stats when interface is up * [PATCH net v4] smsc911x: only update stats when interface is up @ 2023-03-29 6:40 Wolfram Sang 2023-03-29 7:41 ` Steen.Hegelund 2023-03-29 19:39 ` Jakub Kicinski 0 siblings, 2 replies; 5+ messages in thread From: Wolfram Sang @ 2023-03-29…

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ApplicationExcludeDialogTest.java test is an automated test which is throwing java.lang.NullPoiinterException : null pData exception. This test fails only in jdk7_b15 pit build , pass in jdk1.6.0 & jdk1.7.0 till b13 & i even the test pass in jdk1.7.0 b14 pit also. The test fails only in windows. Exception occurred during…

CK_KEY_DERIVATION_STRING_DATA (Luna Java PKCS#11 API Specification) JavaScript is disabled on your browser. java.lang.Object com.safenetinc.jcprov.params.CK_KEY_DERIVATION_STRING_DATA Field Summary Fields  Modifier and Type Field and Description long len lenght of the byte string byte[] pData byte string Method Summary Methods inherited from class java.lang.Object equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait Field…

Re: [PATCH 3/4] net: dsa: b53: mmap: allow passing a chip ID – Simon Horman From: Simon Horman <simon.horman@corigine.com> To: “Álvaro Fernández Rojas” <noltari@gmail.com> Cc: f.fainelli@gmail.com, andrew@lunn.ch, olteanv@gmail.com, davem@davemloft.net, edumazet@google.com, kuba@kernel.org, pabeni@redhat.com, robh+dt@kernel.org, krzysztof.kozlowski+dt@linaro.org, netdev@vger.kernel.org, devicetree@vger.kernel.org, linux-kernel@vger.kernel.org Subject: Re: [PATCH 3/4] net: dsa: b53: mmap: allow passing a chip ID…

[PATCH] thermal: amlogic: Use dev_err_probe() * [PATCH] thermal: amlogic: Use dev_err_probe() @ 2023-03-24 2:20 ye.xingchen 2023-03-24 10:11 ` Neil Armstrong 2023-03-25 13:09 ` Martin Blumenstingl 0 siblings, 2 replies; 3+ messages in thread From: ye.xingchen @ 2023-03-24 2:20 UTC (permalink / raw) To: glaroque Cc: rafael, daniel.lezcano, amitk, rui.zhang, linux-pm,…

Here is my code: #### library(bsseq) library(bsseqData) ## —-showData—————————————————————– data(BS.cancer.ex) BS.cancer.ex <- updateObject(BS.cancer.ex) BS.cancer.ex pData(BS.cancer.ex) ## —-smooth,eval=FALSE——————————————————– # BS.cancer.ex.fit <- BSmooth( # BSseq = BS.cancer.ex, # BPPARAM = MulticoreParam(workers = 1), # verbose = TRUE) ## —-showDataFit————————————————————– data(BS.cancer.ex.fit) BS.cancer.ex.fit <- updateObject(BS.cancer.ex.fit) BS.cancer.ex.fit ## —-cpgNumbers————————————————————— ## The average coverage of CpGs…

Here is the tutorial (Analyzing WGBS data with bsseq) I want to use this method to visualize differential dmr regions on the same gene. Here is my code： if (!require(“BiocManager”, quietly = TRUE)) install.packages(“BiocManager”) BiocManager::install(“bsseq”) BiocManager::install(“bsseqData”) library(bsseq) library(bsseqData) data(BS.cancer.ex.fit) BS.cancer.ex.fit <- updateObject(BS.cancer.ex.fit) BS.cancer.ex.fit class(BS.cancer.ex.fit) ## data(BS.cancer.ex.fit) # BS.cancer.ex.fit <- updateObject(BS.cancer.ex.fit)…

[PATCH 1/2] edac: cpc925: Drop unused memory size DT parsing – Rob Herring From: Rob Herring <robh@kernel.org> To: Borislav Petkov <bp@alien8.de>, Tony Luck <tony.luck@intel.com>, James Morse <james.morse@arm.com>, Mauro Carvalho Chehab <mchehab@kernel.org>, Robert Richter <rric@kernel.org> Cc: linux-edac@vger.kernel.org, linux-kernel@vger.kernel.org Subject: [PATCH 1/2] edac: cpc925: Drop unused memory size DT parsing Date: Sun,…

Hi all, I am not sure if this is the right place to ask this question, but I’ve just updated my DESeq2 package from version 1.4.5 to version 1.6.3 and my scripts are no longer working. Specifically, I get the following error when generating a DESeqDataSet object with the function…

[PATCHv2 08/12] power: supply: generic-adc-battery: use simple-battery API – Sebastian Reichel From: Sebastian Reichel <sre@kernel.org> To: Sebastian Reichel <sre@kernel.org> Cc: Linus Walleij <linus.walleij@linaro.org>, Matti Vaittinen <mazziesaccount@gmail.com>, Rob Herring <robh+dt@kernel.org>, Krzysztof Kozlowski <krzysztof.kozlowski+dt@linaro.org>, linux-kernel@vger.kernel.org, linux-pm@vger.kernel.org, devicetree@vger.kernel.org Subject: [PATCHv2 08/12] power: supply: generic-adc-battery: use simple-battery API Date: Tue, 14 Mar 2023 23:55:31…

Date Sat, 11 Mar 2023 19:28:05 +0000 From Jonathan Cameron <> Subject Re: [PATCH v1 2/4] misc: adps990x: convert to OF On Wed, 8 Mar 2023 11:02:17 +0200Svyatoslav Ryhel <clamor95@gmail.com> wrote:> Add ability to get essential values from device tree.> > Signed-off-by: Svyatoslav Ryhel <clamor95@gmail.com>Hi,Some comments inline.> —> drivers/misc/apds990x.c |…

I am working with 450K methylation data and have a genomic ratio set object (GRset) I have a design matrix as such using design <- model.matrix(~0+Mutation+cov1+cov2+cov3, data = pData(GRset)) head(design) Absent Present cov1 cov2.1 cov2.2 cov2.3 cov3 sample1 1 0 0 0 1 0 0.5276 sample2 1 0 0 0…

Drop support for configuring IRQ jitter delay by using bigenough fixed value. Signed-off-by: Sebastian Reichel <sre@kernel.org>—drivers/power/supply/generic-adc-battery.c | 13 ++++———include/linux/power/generic-adc-battery.h | 3 —2 files changed, 4 insertions(+), 12 deletions(-) diff –git a/drivers/power/supply/generic-adc-battery.c b/drivers/power/supply/generic-adc-battery.cindex 535972a332b3..e20894460d7f 100644— a/drivers/power/supply/generic-adc-battery.c+++ b/drivers/power/supply/generic-adc-battery.c@@ -227,12 +227,10 @@ static void gab_work(struct work_struct *work)static irqreturn_t gab_charged(int irq, void *dev_id){struct gab…

[PATCH v2 5/9] coresight: Dynamically add connections – James Clark From: James Clark <james.clark@arm.com> To: coresight@lists.linaro.org Cc: James Clark <james.clark@arm.com>, Mathieu Poirier <mathieu.poirier@linaro.org>, Suzuki K Poulose <suzuki.poulose@arm.com>, Mike Leach <mike.leach@linaro.org>, Leo Yan <leo.yan@linaro.org>, Alexander Shishkin <alexander.shishkin@linux.intel.com>, linux-arm-kernel@lists.infradead.org, linux-kernel@vger.kernel.org Subject: [PATCH v2 5/9] coresight: Dynamically add connections Date: Fri, 10 Mar…

[PATCH] nfc: mrvl: Use of_property_read_bool() for boolean properties * [PATCH] nfc: mrvl: Use of_property_read_bool() for boolean properties @ 2023-03-10 14:47 Rob Herring 0 siblings, 0 replies; only message in thread From: Rob Herring @ 2023-03-10 14:47 UTC (permalink / raw) To: Krzysztof Kozlowski; +Cc: devicetree, netdev, linux-kernel It is preferred…

[PATCH v1 2/2] media: lm3560: convent to OF – Svyatoslav Ryhel From: Svyatoslav Ryhel <clamor95@gmail.com> To: Mauro Carvalho Chehab <mchehab@kernel.org>, Rob Herring <robh+dt@kernel.org>, Krzysztof Kozlowski <krzysztof.kozlowski+dt@linaro.org>, Svyatoslav Ryhel <clamor95@gmail.com>, Hans Verkuil <hverkuil-cisco@xs4all.nl>, Luca Ceresoli <luca.ceresoli@bootlin.com>, Jean Delvare <jdelvare@suse.de>, Sebastian Reichel <sebastian.reichel@collabora.com>, Daniel Jeong <gshark.jeong@gmail.com>, Ldd-Mlp <ldd-mlp@list.ti.com> Cc: linux-media@vger.kernel.org, devicetree@vger.kernel.org, linux-kernel@vger.kernel.org…

[PATCH 8/8] clk: Add KUnit tests for clks registered with struct clk_parent_data – Stephen Boyd From: Stephen Boyd <sboyd@kernel.org> To: Michael Turquette <mturquette@baylibre.com>, Stephen Boyd <sboyd@kernel.org> Cc: linux-kernel@vger.kernel.org, linux-clk@vger.kernel.org, patches@lists.linux.dev, Brendan Higgins <brendan.higgins@linux.dev>, David Gow <davidgow@google.com>, Greg Kroah-Hartman <gregkh@linuxfoundation.org>, “Rafael J . Wysocki” <rafael@kernel.org>, Richard Weinberger <richard@nod.at>, Anton Ivanov <anton.ivanov@cambridgegreys.com>,…

1 // SPDX-License-Identifier: GPL-2.0 2 /* 3 * Driver for FPGA Management Engine (FME) Partial Reconfiguration 4 * 5 * Copyright (C) 2017-2018 Intel Corporation, Inc. 6 * 7 * Authors: 8 * Kang Luwei <luwei.kang@intel.com> 9 * Xiao Guangrong <guangrong.xiao@linux.intel.com> 10 * Wu Hao <hao.wu@intel.com> 11 * Joseph Grecco…

Template class to serve as a basis for user analysis tools. Examples: template.cpp. Analyzes a single frame. Parameters [in] frnr Frame number, a zero-based index that uniquely identifies the frame. [in] fr Current frame. [in] pbc Periodic boundary conditions for fr. [in,out] pdata Data structure for frame-local data. This method…

I’m trying to remove batch effect from my data using the sva package. The process described here is like this: library(bladderbatch) data(bladderdata) pheno = pData(bladderEset) edata = exprs(bladderEset) # The null model contains only the adjustment variables. Since we are not adjusting # for any other variables in this analysis,…

logFC is negative, need help to get it done 0 I had normalized count matrix with few negative values or I should say log transformed normalized matrix. I performed the following analysis in limma (the code is below). I got the results , I am getting all logfC value in…

Transcribed image text: Pointer Exercises: Problem One: Consider a company that needs to sort an array Person data[10] of structures of type Person by name. struct Person \{ string name: int age: \} Write a program that sorts the array of pointers so that when you go through Person *pData[10]…

updating annotation of illumina human methylation 450k data 0 I have managed to create a GenomicRatioSet (minfi object) from an expression set (pulled from GEO using GEOquery) which contains a matrix of pre-processed beta values obtained with the exprs() function as such: GRset <- makeGenomicRatioSetFromMatrix(exprs(Eset), rownames = rownames(exprs(Eset)), pData =…

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[PATCH AUTOSEL 4.19 1/6] ASoC: cs42l56: fix DT probe * [PATCH AUTOSEL 4.19 1/6] ASoC: cs42l56: fix DT probe @ 2023-02-09 11:19 Sasha Levin 2023-02-09 11:19 ` [PATCH AUTOSEL 4.19 2/6] tools/virtio: fix the vringh test for virtio ring changes Sasha Levin ` (4 more replies) 0 siblings, 5 replies;…

I am looking to analyse some pre-processed infinium 450k methylation data (GSE65820) – values have been normalised and undergone QC and removal of batch effects. I have used GEOquery to download the series matrix file GSE65820 <- getGEO(“GSE65820”, GSEMatrix=TRUE) From this I have extracted metadata about the samples using the…

Date Mon, 6 Feb 2023 09:39:09 +0530 Subject Re: [PATCH] amd-xgbe: fix mismatched prototype From Shyam Sundar S K <> On 2/3/2023 5:45 PM, Arnd Bergmann wrote:> From: Arnd Bergmann <arnd@arndb.de>> > The forward declaration was introduced with a prototype that does> not match the function definition:> > drivers/net/ethernet/amd/xgbe/xgbe-phy-v2.c:2166:13: error:…

[PATCH] amd-xgbe: fix mismatched prototype * [PATCH] amd-xgbe: fix mismatched prototype @ 2023-02-03 12:15 Arnd Bergmann 2023-02-04 13:18 ` Simon Horman 0 siblings, 1 reply; 2+ messages in thread From: Arnd Bergmann @ 2023-02-03 12:15 UTC (permalink / raw) To: Shyam Sundar S K, David S. Miller, Eric Dumazet, Jakub…

[PATCH] mmc: atmel: convert to gpio descriptos * [PATCH] mmc: atmel: convert to gpio descriptos @ 2023-01-26 13:50 Arnd Bergmann 2023-01-26 23:54 ` Jakub Kicinski 2023-01-27 10:32 ` Nicolas Ferre 0 siblings, 2 replies; 4+ messages in thread From: Arnd Bergmann @ 2023-01-26 13:50 UTC (permalink / raw) To: Ludovic…

From: Arnd Bergmann <arnd@arndb.de> gpio_set_debounce() only has a single user, which is triviallyconverted to gpiod_set_debounce(). Signed-off-by: Arnd Bergmann <arnd@arndb.de>—Documentation/driver-api/gpio/legacy.rst | 2 —…/zh_CN/driver-api/gpio/legacy.rst | 1 –Documentation/translations/zh_TW/gpio.txt | 1 –drivers/input/touchscreen/ads7846.c | 25 ++++++++++———include/linux/gpio.h | 10 ——–5 files changed, 13 insertions(+), 26 deletions(-) diff –git a/Documentation/driver-api/gpio/legacy.rst b/Documentation/driver-api/gpio/legacy.rstindex a0559d93efd1..e0306e78e34b 100644— a/Documentation/driver-api/gpio/legacy.rst+++ b/Documentation/driver-api/gpio/legacy.rst@@ -238,8 +238,6…

[PATCH net-next 0/2] amd-xgbe: add support for 2.5GbE and rx-adaptation * [PATCH net-next 0/2] amd-xgbe: add support for 2.5GbE and rx-adaptation @ 2023-01-25 7:25 Raju Rangoju 2023-01-25 7:25 ` [PATCH net-next 1/2] amd-xgbe: add 2.5GbE support to 10G BaseT mode Raju Rangoju 2023-01-25 7:25 ` [PATCH net-next 2/2] amd-xgbe: add…

[RFC PATCH 13/19] fpga: dfl: afu: convert to use vm_account – Alistair Popple From: Alistair Popple <apopple@nvidia.com> To: linux-mm@kvack.org, cgroups@vger.kernel.org Cc: linux-kernel@vger.kernel.org, jgg@nvidia.com, jhubbard@nvidia.com, tjmercier@google.com, hannes@cmpxchg.org, surenb@google.com, mkoutny@suse.com, daniel@ffwll.ch, Alistair Popple <apopple@nvidia.com>, Wu Hao <hao.wu@intel.com>, Tom Rix <trix@redhat.com>, Moritz Fischer <mdf@kernel.org>, Xu Yilun <yilun.xu@intel.com>, linux-fpga@vger.kernel.org Subject: [RFC PATCH 13/19] fpga:…

Recently, in the development process, binary files need to be saved in the database, so I learned about the data type of sqlite3 and found that blob can store binary data. But what about blobs? What sentence do you use? In fact, it needs to operate some underlying APIs of…

[PATCH] watchdog: bcm7038: Use devm_clk_get_enabled() helper * [PATCH] watchdog: bcm7038: Use devm_clk_get_enabled() helper @ 2022-12-31 8:10 Christophe JAILLET 2022-12-31 16:49 ` Florian Fainelli 2022-12-31 19:29 ` Guenter Roeck 0 siblings, 2 replies; 3+ messages in thread From: Christophe JAILLET @ 2022-12-31 8:10 UTC (permalink / raw) To: Wim Van Sebroeck,…

From: Jiguang Xiao <jiguang.xiao@windriver.com> The driver does not call tasklet_kill in several places.Add the calls to fix it. Fixes: 85b85c853401 (amd-xgbe: Re-issue interrupt if interrupt statusnot cleared)Signed-off-by: Jiguang Xiao <jiguang.xiao@windriver.com>—drivers/net/ethernet/amd/xgbe/xgbe-drv.c | 3 +++drivers/net/ethernet/amd/xgbe/xgbe-i2c.c | 4 +++-drivers/net/ethernet/amd/xgbe/xgbe-mdio.c | 4 +++-3 files changed, 9 insertions(+), 2 deletions(-) diff –git a/drivers/net/ethernet/amd/xgbe/xgbe-drv.c b/drivers/net/ethernet/amd/xgbe/xgbe-drv.cindex 7b666106feee..614c0278419b…

microarray analysis – gene upregulation/downregulation 0 Hi guys, I have performed microarray differential expression analysis using the following R commands/script: library(“arrayQualityMetrics”) > library(GEOquery) > library(oligo) > library(Biobase) > library(affy) > library(“splitstackshape”) > library(“tidyr”) > library(dplyr) > celFiles <- list.celfiles() > affyRaw <- read.celfiles(celFiles) Platform design info loaded. Reading in :…

Re: [PATCH 2/3] hwmon (coretemp): Add support for dynamic tjmax – Guenter Roeck From: Guenter Roeck <linux@roeck-us.net> To: Zhang Rui <rui.zhang@intel.com> Cc: jdelvare@suse.com, fenghua.yu@intel.com, linux-hwmon@vger.kernel.org, srinivas.pandruvada@linux.intel.com Subject: Re: [PATCH 2/3] hwmon (coretemp): Add support for dynamic tjmax Date: Fri, 11 Nov 2022 13:26:45 -0800 [thread overview] Message-ID: <20221111212645.GA1059539@roeck-us.net> (raw) In-Reply-To:…

[PATCH] mailbox: mtk-cmdq-mailbox: Use platform data directly instead of copying * [PATCH] mailbox: mtk-cmdq-mailbox: Use platform data directly instead of copying @ 2022-11-02 10:07 AngeloGioacchino Del Regno 0 siblings, 0 replies; only message in thread From: AngeloGioacchino Del Regno @ 2022-11-02 10:07 UTC (permalink / raw) To: jassisinghbrar Cc: matthias.bgg,…

[PATCH 07/14] iio: st_sensors: core and lsm9ds0 switch to devm_regulator_bulk_get_enable() – Jonathan Cameron From: Jonathan Cameron <jic23@kernel.org> To: linux-iio@vger.kernel.org Cc: Matti Vaittinen <mazziesaccount@gmail.com>, Matti Vaittinen <matti.vaittinen@fi.rohmeurope.com>, Cosmin Tanislav <cosmin.tanislav@analog.com>, Jagath Jog J <jagathjog1996@gmail.com>, Sean Nyekjaer <sean@geanix.com>, Dmitry Rokosov <DDRokosov@sberdevices.ru>, Linus Walleij <linus.walleij@linaro.org>, Andy Shevchenko <andriy.shevchenko@linux.intel.com>, Michael Hennerich <michael.hennerich@analog.com>, Lorenzo Bianconi…

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Hi, I have found that my selected gene, probe I.D 201667_at is differentially expressed between WDLPS and DDLPS tumour tissue samples after performing microarray DEG analysis. Instead of just a p value in a table format: Probe I.D “201667_at” logFC 10.8205874181535 AveExpr 10.6925705768407 t 82.8808890739766 P.Value 3.10189446528995e-88 adj.P Val 3.10189446528995e-88…

I am a student and struggling with a specific problem regarding the pgmm() function of the plm package in R. I have a pdata.frame for which I want to use the pgmm function for a dynamic panel model. However, the following error occurs: Error in pdata.frame(data, index): variable NA does…

[PATCH] leds: max8997: Don’t error if there is no pdata * [PATCH] leds: max8997: Don’t error if there is no pdata @ 2022-08-07 10:40 Paul Cercueil 2022-08-08 13:16 ` Andy Shevchenko 0 siblings, 1 reply; 2+ messages in thread From: Paul Cercueil @ 2022-08-07 10:40 UTC (permalink / raw) To:…

[PATCH 2/2] iio: st_sensors: Fix null pointer on defer_probe error – Matti Lehtimäki From: “Matti Lehtimäki” <matti.lehtimaki@gmail.com> To: linux-iio@vger.kernel.org Cc: ~postmarketos/upstreaming@lists.sr.ht, “Matti Lehtimäki” <matti.lehtimaki@gmail.com>, “Jonathan Cameron” <jic23@kernel.org>, “Lars-Peter Clausen” <lars@metafoo.de>, “Miquel Raynal” <miquel.raynal@bootlin.com>, “Linus Walleij” <linus.walleij@linaro.org>, “Cai Huoqing” <cai.huoqing@linux.dev>, “Alexandru Ardelean” <aardelean@deviqon.com>, linux-kernel@vger.kernel.org Subject: [PATCH 2/2] iio: st_sensors: Fix null…

Re: [net-next: PATCH 11/12] net: dsa: mv88e6xxx: switch to device_/fwnode_ APIs – Marcin Wojtas From: Marcin Wojtas <mw@semihalf.com> To: Andy Shevchenko <andriy.shevchenko@linux.intel.com> Cc: Linux Kernel Mailing List <linux-kernel@vger.kernel.org>, ACPI Devel Maling List <linux-acpi@vger.kernel.org>, netdev <netdev@vger.kernel.org>, “Rafael J. Wysocki” <rafael@kernel.org>, Len Brown <lenb@kernel.org>, Andrew Lunn <andrew@lunn.ch>, vivien.didelot@gmail.com, Florian Fainelli <f.fainelli@gmail.com>, Vladimir…

Question: Microsoft extensions to C and C++: To perform the same cast and also maintain ANSI compatibility, you can cast the function pointer to a uintptr_t before you cast it to a data pointer: int ( * pfunc ) (); int *pdata; pdata = ( int * ) (uintptr_t) pfunc;…

You are overwriting the same file everytime in your loop. You need to change the file-name as well: pFile = ‘test.csv’ oFile = ‘test’ #add xml later if os.path.isfile(pFile) and pFile.endswith(ext): with open(pFile, ‘r’) as pData: reader = csv.reader(pData) pData = {} for i, row in enumerate(reader, 1): #count each…

Hi Uri, Thank you for the patch! Yet something to improve: [auto build test ERROR on staging/staging-testing] url: github.com/intel-lab-lkp/linux/commits/Uri-Arev/staging-fbtft-fix-checkpatch-pl-struct-should-normally-be-const/20220520-012948 base: git.kernel.org/pub/scm/linux/kernel/git/gregkh/staging.git 4d0cc9e0e53e9946d7b8dc58279c62dfa7a2191b config: arm64-randconfig-r011-20220519 (download.01.org/0day-ci/archive/20220520/202205200821.nJQ0IfFt-lkp@xxxxxxxxx/config) compiler: clang version 15.0.0 (github.com/llvm/llvm-project e00cbbec06c08dc616a0d52a20f678b8fbd4e304) reproduce (this is a W=1 build): wget raw.githubusercontent.com/intel/lkp-tests/master/sbin/make.cross -O ~/bin/make.cross chmod +x ~/bin/make.cross # install arm64 cross compiling tool…

[PATCH] ASoC: fsl: Fix error handling in pcm030_fabric_probe * [PATCH] ASoC: fsl: Fix error handling in pcm030_fabric_probe @ 2022-03-01 7:53 Miaoqian Lin 2022-03-02 13:44 ` Mark Brown 0 siblings, 1 reply; 7+ messages in thread From: Miaoqian Lin @ 2022-03-01 7:53 UTC (permalink / raw) To: Liam Girdwood, Mark Brown,…

Re: [PATCH] staging: rtl8712: fix uninit-value “data” and “mac” – Dan Carpenter From: Dan Carpenter <dan.carpenter@oracle.com> To: Wang Cheng <wanngchenng@gmail.com> Cc: Larry.Finger@lwfinger.net, florian.c.schilhabel@googlemail.com, gregkh@linuxfoundation.org, linux-staging@lists.linux.dev, linux-kernel@vger.kernel.org Subject: Re: [PATCH] staging: rtl8712: fix uninit-value “data” and “mac” Date: Fri, 15 Apr 2022 13:02:23 +0300 [thread overview] Message-ID: <20220415100223.GS3293@kadam> (raw) In-Reply-To: <20220415094705.aibh3jr4wzhddmud@ppc.localdomain>…

    Codecov[bot]   Merging #5162 (1fd26e4) into main (a1c539a) will increase coverage by 0.03%. The diff coverage is n/a. @@ Coverage Diff @@ ## main #5162 +/- ## ========================================== + Coverage 90.33% 90.37% +0.03% ========================================== Files 182 182 Lines 11000 11000 ========================================== + Hits 9937 9941 +4 + Misses…

else if (verInfo.dwBuildNumber == 19041) { pData->ver = WINVER_10_20H1; // KP pData->KExecOpt = 0x283; // EP pData->Protection = 0x87A; pData->EProcessFlags2 = 0x9D4; // MitigationFlags offset pData->ObjTable = 0x570; pData->VadRoot = 0x7D8; // KT pData->PrevMode = 0x232; // ET pData->ExitStatus = 0x548; // SSDT pData->NtCreateThdExIndex = 0xC1; pData->NtTermThdIndex = 0x53; pData->MiAllocPage…

HI So, I want to try the compute shader to calculate transfer functions on my 3D texture, and output a new 3D texture, but I cant get it to work at all… Nothing happens. Right now I am just trying to fill the whole new 3D texture (outVolumeTexture) with values…

Messages in this thread Subject Re: [PATCH v4 3/3] drm/bridge: ti-sn65dsi86: Support hotplug detection From Kieran Bingham <> Date Wed, 23 Mar 2022 22:11:25 +0000 Quoting Doug Anderson (2022-03-23 21:47:17)> Hi,> > On Thu, Mar 17, 2022 at 6:13 AM Kieran Bingham> <kieran.bingham+renesas@ideasonboard.com> wrote:> >> > @@ -1241,9 +1350,32 @@…

Quoting Kieran Bingham (2022-03-07 17:59:54) > From: Laurent Pinchart <laurent.pinchart+renesas@xxxxxxxxxxxxxxxx> > > Despite the SN65DSI86 being an eDP bridge, on some systems its output is > routed to a DisplayPort connector. Enable DisplayPort mode when the next > component in the display pipeline is detected as a DisplayPort > connector,…

RE: [PATCH] input: keyboard: snvs_pwrkey: Add key-release-only – Jacky Bai From: Jacky Bai <ping.bai@nxp.com> To: Alifer Moraes <alifer.m@variscite.com>, “linux-kernel@vger.kernel.org” <linux-kernel@vger.kernel.org> Cc: “devicetree@vger.kernel.org” <devicetree@vger.kernel.org>, “dmitry.torokhov@gmail.com” <dmitry.torokhov@gmail.com>, “eran.m@variscite.com” <eran.m@variscite.com>, “festevam@gmail.com” <festevam@gmail.com>, “kernel@pengutronix.de” <kernel@pengutronix.de>, “linux-arm-kernel@lists.infradead.org” <linux-arm-kernel@lists.infradead.org>, dl-linux-imx <linux-imx@nxp.com>, “linux-input@vger.kernel.org” <linux-input@vger.kernel.org>, Pierluigi Passaro <pierluigi.p@variscite.com>, “robh+dt@kernel.org” <robh+dt@kernel.org>, “s.hauer@pengutronix.de” <s.hauer@pengutronix.de>, “shawnguo@kernel.org” <shawnguo@kernel.org>, “u.kleine-koenig@pengutronix.de” <u.kleine-koenig@pengutronix.de>, mcontenti <marco.c@variscite.com>…

Hello,I’m using a Sparkfun ESP32 Thing with the Arduino framework, trying to connect to and read from services on some W4 beacons – www.mokosmart.com/positioning-beacon-w3-w4/ I can successfully scan for the beacons, get the address, local name etc. however, actually connecting never succeeds – the call to client->connect() never returns. My…

[PATCH V2 1/2] net: ravb: Add tx/rx delay flag checks and support for rgmii-rxid * [PATCH V2 1/2] net: ravb: Add tx/rx delay flag checks and support for rgmii-rxid @ 2022-02-25 18:29 Adam Ford 2022-02-25 18:29 ` [PATCH V2 2/2] arm: rmobile: rzg2_beacon: Enable proper Ethernet PHY Adam Ford 2022-02-25…

[PATCH v2] media: m5mols: Convert to use GPIO descriptors * [PATCH v2] media: m5mols: Convert to use GPIO descriptors @ 2022-02-24 0:13 Linus Walleij 0 siblings, 0 replies; only message in thread From: Linus Walleij @ 2022-02-24 0:13 UTC (permalink / raw) To: Mauro Carvalho Chehab, linux-media Cc: Linus Walleij,…

The function “drm_of_find_panel_or_bridge” has been deprecated in favor of “devm_drm_of_get_bridge”. Switch to the new function and reduce boilerplate. Signed-off-by: José Expósito <jose.exposito89@xxxxxxxxx> — drivers/gpu/drm/bridge/analogix/anx7625.c | 16 +++++———– 1 file changed, 5 insertions(+), 11 deletions(-) diff –git a/drivers/gpu/drm/bridge/analogix/anx7625.c b/drivers/gpu/drm/bridge/analogix/anx7625.c index 2346dbcc505f..dfeb800751d5 100644 — a/drivers/gpu/drm/bridge/analogix/anx7625.c +++ b/drivers/gpu/drm/bridge/analogix/anx7625.c @@ -1333,8 +1333,6 @@ static…

[PATCH 3/3] leds: regulator: Make probeable from device tree – Linus Walleij From: Linus Walleij <linus.walleij@linaro.org> To: Pavel Machek <pavel@ucw.cz> Cc: linux-leds@vger.kernel.org, Linus Walleij <linus.walleij@linaro.org>, Antonio Ospite <ao2@ao2.it> Subject: [PATCH 3/3] leds: regulator: Make probeable from device tree Date: Sun, 20 Feb 2022 00:56:07 +0100 [thread overview] Message-ID: <20220219235607.1613686-3-linus.walleij@linaro.org> (raw)…

[PATCH] staging: wfx: fix the error handling in wfx_init_common() * [PATCH] staging: wfx: fix the error handling in wfx_init_common() @ 2022-02-17 15:29 xkernel.wang 2022-02-17 15:36 ` Greg KH 0 siblings, 1 reply; 2+ messages in thread From: xkernel.wang @ 2022-02-17 15:29 UTC (permalink / raw) To: jerome.pouiller, gregkh; +Cc: linux-staging,…

MetricValueType type sounds confusing. It’s not a type of any metric value, it’s applicable to numeric values only. Originally raised by @bogdandrutu github.com/open-telemetry/opentelemetry-collector/pull/4811#discussion_r801186353: On the list of “may fix”: MetricValueType does not sound as the best name for the enum. Maybe NumberValueType? PointValueType? Not sure, just open an issue, this…

Public Member Functions virtual void  initOptions (IOptionsContainer *options, TrajectoryAnalysisSettings *settings)   Initializes options understood by the module. More…   virtual void  optionsFinished (TrajectoryAnalysisSettings *settings)   Called after all option values have been set. More…   virtual void  initAnalysis (const TrajectoryAnalysisSettings &settings, const TopologyInformation &top)   Initializes the analysis. More…  …

[PATCH v1 5/9] drm/bridge: ti-sn65dsi86: Fetch bpc via drm_bridge_state – Sam Ravnborg From: Sam Ravnborg <sam@ravnborg.org> To: dri-devel@lists.freedesktop.org, Douglas Anderson <dianders@chromium.org> Cc: Rob Clark <robdclark@chromium.org>, Philip Chen <philipchen@chromium.org>, Jitao Shi <jitao.shi@mediatek.com>, Thomas Zimmermann <tzimmermann@suse.de>, Jonas Karlman <jonas@kwiboo.se>, Robert Foss <robert.foss@linaro.org>, Neil Armstrong <narmstrong@baylibre.com>, Jernej Skrabec <jernej.skrabec@gmail.com>, Andrzej Hajda <a.hajda@samsung.com>, Laurent…

From Andy Shevchenko <> Subject [PATCH v1 1/1] iio: frequency: adf4350: Make use of device properties Date Wed, 2 Feb 2022 22:29:36 +0200 Convert the module to be property provider agnostic and allowit to be used on non-OF platforms.Signed-off-by: Andy Shevchenko <andriy.shevchenko@linux.intel.com>—drivers/iio/frequency/adf4350.c | 103 +++++++++++++——————-1 file changed, 42 insertions(+), 61…

Hi All, In my analysis, I want to find the different expression genes betweendissese A and B. There are two type of batch effect in my analysis. Iwant to use limma to remove two type of batch effect, one is gender,another is tissue type. I do as fellow. But I…

From Yong Wu <> Subject [PATCH v4 16/35] iommu/mediatek: Add IOMMU_TYPE flag Date Tue, 25 Jan 2022 16:56:15 +0800 Add IOMMU_TYPE definition. In the mt8195, we have another IOMMU_TYPE:infra iommu, also there will be another APU_IOMMU, thus, use 2bits for theIOMMU_TYPE.Signed-off-by: Yong Wu <yong.wu@mediatek.com>Reviewed-by: AngeloGioacchino Del Regno <angelogioacchino.delregno@collabora.com>—drivers/iommu/mtk_iommu.c | 12…

Hi from krita import * def selectRGB(node, red, green, blue, selectionLevel=255): # get pixels data from node projection # for RGBA/8bit, pixel data format: Blue, Green, Red, Alpha pdata=node.projectionPixelData(node.bounds().left(), node.bounds().top(), node.bounds().width(), node.bounds().height()) bred=red.to_bytes(1, ‘big’) bgreen=green.to_bytes(1, ‘big’) bblue=blue.to_bytes(1, ‘big’) # prepare selection (0=no selection, 255=full selection) selectionPixels=[0]*(node.bounds().width()*node.bounds().height()) offset=0 for index in…

So I’ve been trying to create a custom system (kinda lika a garage system, but different) for my server.As I got to the part where I display the player all vehicles he ownes I need to create a server callback where the script gets all vehicles from the database using…