Tag: PostgreSQL

We do Data Science, Big Data, Statistics, RStudio, Python, SPSS | Classes & Lessons | City of Toronto

We are a team of experts offering top-quality assignment writing services in the fields of Artificial Intelligence, Machine Learning, Data Science, Big Data, and Statistics. We have in-depth knowledge and experience in the following areas: AI: ✅ Natural Language Processing ✅ Computer Vision ✅ Robotics ✅ Deep Learning ✅ Neural…

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How to Connect a FastAPI Server to PostgreSQL and Deploy on GCP Cloud Run

When I was building Ballistic, I chose for FastAPI as the web framework for my backend API in Python, since it had gained significant popularity in the Python community in a very short amount of time. Apart from its performance, powered by the usage of the asyncio library, I was…

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Using Apache Age for Bioinformatics: Exploring Protein-Protein Interaction Networks

The field of bioinformatics has rapidly evolved with the advent of high-throughput sequencing technologies and other advanced experimental methods. These technologies generate massive datasets that require equally advanced computational methods for analysis. Graph databases, such as Apache Age, have emerged as powerful tools for managing and analyzing these complex datasets….

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Mobile Programming LLC hiring Data Analyst – Bioinformatics (PD) in Bengaluru, Karnataka, India

Job Description • Job Title: Data Analyst – Bioinformatics • Location: Bangalore • Experience:- 2 – 3 Years • Salary Range: Upto 12 LPA • Notice Period:- Immediate joiner is preferred. Job Description: We are looking for an experienced Data Analyst with a strong background in Bioinformatics to join our…

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Senior Full Stack Developer (DECIPHER) at European Molecular Biology Laboratory (EMBL)

About the team/job The DECIPHER platform accelerates disease research and healthcare by enabling the sharing of variants and phenotypic data from patients with rare genetic disorders. As a result of our work, hundreds of papers are published every year increasing knowledge of such disorders, and many thousands of rare disease…

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Revvity hiring Senior Bioinformatics Scientist in Cambridge, England, United Kingdom

About The RoleWe have an exciting opportunity for an experienced bioinformatician who is interested in working at the forefront of the gene editing (CRISPR knock-out, base editing) and gene modulation (CRISPRa, CRISPRi, RNAi) fields. We are seeking a Cambridge-based Senior Bioinformatics Scientist 1 to join our global Bioinformatics team, which…

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Cannot connect to Postgres database from RStudio but can connect from DBeaver and psql

Can connect to the database from psql and DBeaver but when using RpostgreSQL package in RSudio I receive the following error: RPosgreSQL error: could not connect user@hostname on dbname “database”: FATAL: no pg_hba.conf entry for host “”, user “user_name”, database “databse”, SSL off Macbook Pro ’21, M1, macOS Monterey Here…

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Staff scientist in biostatistics and bioinformatics – Strasbourg

Employer The team is studying the functional genomics of diseases involving the immune system. For this purpose, “omics” approaches (genomics, transcriptomics, scRNAseq, proteomics, etc.) are used to better understand the pathophysiology of these diseases. Our objective is in particular to develop new biomarkers allowing an earlier diagnosis of these immune…

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Is it normal to get truncated identifiers after applying SQL scema of RegaDB?

Is it normal to get truncated identifiers after applying SQL scema of RegaDB? 0 Hello, everyone I am trying to set up RegaDB on my CentOS system, and I have installed PostgreSQL via conda. I followed the RegaDB installation manual to configure the PostgreSQL database. However, when I have applied…

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Google Data Cloud & AI Summit 2023: Highlights

The Google Data Cloud & AI Summit is an annual event and a part of Google’s digital cloud summit series. It focuses on revealing insights, solutions, business transformation opportunities, and the latest innovations in Google Data Cloud for AI, databases, data analytics, and business intelligence to enthusiasts, developers, business users,…

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Forum Systems Releases Next Generation of API Gateway

Sentry combines performant integration with intelligent real-time analytics BOSTON , April 14, 2023 /PRNewswire/ — Forum Systems Inc., a leader in API gateway technology, releases the next generation of its flagship product, Forum Sentry, Version 9.1. The company continues to redefine excellence in API integration, security, and identity management. “CIOs…

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PerkinElmer Informatics hiring Senior Bioinformatics Scientist in Cambridge, England, United Kingdom

Responsibilities Location Cambridge, CambridgeshireGB Job ID JR-036129 About The PerkinElmer Life Sciences And Diagnostics Company The PerkinElmer Life Sciences and Diagnostics company – which is to be renamed during the second quarter of 2023 – provides end-to-end solutions that help scientists, researchers and clinicians better diagnose disease and discover new…

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geoalchemy2: autopkgtest regression on s390x: AssertionError

Source: geoalchemy2 Version: 0.13.1-2 Severity: serious Tags: sid bookworm bookworm-ignore User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of geoalchemy2 the autopkgtest of geoalchemy2 fails in testing on s390x when that autopkgtest is run with the binary packages of geoalchemy2 from unstable. It passes when run with only…

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Bug#1033711: kore: autopkgtest regression: Killing leaked background processes

Source: kore Version: 4.1.0-6 Severity: serious Control: tags -1 bookworm-ignore User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), Your package has an autopkgtest, great. However, it fails since May 2022. Can you please investigate the situation and fix it? I copied some of the output at the bottom of this report. The…

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Breaking up with the Cloud: Crafting an exit plan

Today businesses are rapidly getting digitally transformed at the back of innovative solutions including Artificial Intelligence, Machine Learning & LLM language models like ChatGPT. Cloud infrastructure and services have played a crucial role in providing impetus to these innovations and truly made it possible to deliver next-gen applications with speed…

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MGnify Website Developer at European Molecular Biology Laboratory (EMBL)

Advertised Grade-Grading: Grade 5 (monthly salary starting at £2,882 after tax) or Grade 6 (monthly salary starting at £3,224) + other paid benefits About the team/job MGnify is EMBL-EBI’s microbiome sequence data analysis resource, which performs the archiving, assembly and analysis of metagenomics data. As the number and diversity of…

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MSigDB SQLite Database – GeneSetEnrichmentAnalysisWiki

From GeneSetEnrichmentAnalysisWiki GSEA Home | Downloads | Molecular Signatures Database | Documentation | Contact Introduction With the release of MSigDB 2023.1 we have created a new SQLite database for the fully annotated gene sets in both the Human (2023.1.Hs) and the Mouse (2023.1.Ms) resources. Each ships as a single-file database…

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9 Top Platforms to Practice Key Data Science Skills

  The nice thing about existing online nowadays is that learning is no longer gatekept. You can read, practice, quiz, and program all by yourself, from the comfort of your own home, without paying for a degree. And because data science is seen as a tricky skill to learn, many…

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Postgres on GCE with workload identity – JupyterHub

New user, first post, new to JupyterHub. I am trying to use an instance of postgres on gce for jupyterhub. At one point I had it working and the db schema created, but it now doesn’t connect and I can’t figure out what I did before that worked I have…

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Illumina hiring Senior Staff Software Engineer in Test

Illumina is seeking a highly driven and talented software engineer in test to join the Bioinformatics organization, where we are developing novel informatics solutions for Illumina’s multi-omics technologies. This role is to architect and develop automated tests, tools and frameworks necessary for verifying and/or validating Illumina’s assays and analysis software….

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[bullseye] r-cran-ggplot2 depends on missing libpq5 v13.8

Hi, I am on bullseye and am trying to install the package r-cran-ggplot2. This fails with E: Failed to fetch deb.debian.org/debian/pool/main/p/postgresql-13/libpq5_13.8-0%2bdeb11u1_amd64.deb 404 Not Found [IP: 146.75.122.132 80] (full output below). There seems to be a dependency on libpq5 version 13.8 whereas the version available for bullseye is 13.9. Any ideas how to…

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Senior Staff Software Engineer in Test – Bioinformatics in San Diego, California

What if the work you did every day could impact the lives of people you know? Or all of humanity?At Illumina, we are expanding access to genomic technology to realize health equity for billions of people around the world. Our efforts enable life-changing discoveries that are transforming human health through…

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Bioconductor – pgUtils

    This package is for version 2.13 of Bioconductor; for the stable, up-to-date release version, see pgUtils. Utility functions for PostgreSQL databases Bioconductor version: 2.13 Functions for creating PostgreSQL database tables, with auto incrementing primary keys, selection of foreign keys to allow referential integrity and a logging mechanism. Author:…

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InterSystems Open Exchange Applications Digest, February 2023 |

Hey Developers!  Here is a digest of new solutions and applications submitted to the InterSystems Open Exchange in February 2023. General Stats: ✓ 18 new apps in February✓ 822 downloads in February✓ 701 applications all time✓ 23,931 downloads all time✓ 2,066 developers joined New Applications (18) New Releases (74) apptools-admin by…

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OpenAPI Jobs

Jobs 1 to 25 of 32 City of London, London, United KingdomHybrid / WFH Options Fimatix UK Ltd Essential Technical Skills Language – JavaScript, NodeJS, Typescript Framework – NestJS/Express/Microservices Testing – Jest/Mocha/Cypress/React testing Library API OpenAPI/GraphQL/GRPC Messaging – AMQP/RabbitMQ/Kafka Data Storage – MongoDB/Mongoose…

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Running SQL Queries in Jupyter Notebook using JupySQL, DuckDB, and MySQL | by Wei-Meng Lee | Feb, 2023

Learn how to run SQL in your Jupyter Notebooks Photo by Wafer WAN on Unsplash Traditionally, data scientists use Jupyter Notebook to pull data from database servers, or from external datasets (such as CSV, JSON files, etc) and store them into Pandas dataframes: All images by author unless otherwise stated…

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Solutions Architect – Eastern Cape

One of the leading global suppliers of Premium and Luxury Cars and one of the world’s largest manufacturer of commercial vehicles. Seeks the expertise of a Solutions Architect to join their Dynamic team. Minimum Qualification & Experience: NQF 6 Required 5+ years’ experience designing and building software applications Proficiency with…

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Bioinformatics Programmer II – Hybrid/Remote

#119126 Bioinformatics Programmer II – Hybrid/Remote Extended Deadline: Tue 2/21/2023 This position will remain open until a successful candidate has been identified. UCSD Layoff from Career Appointment: Apply by 10/03/2022 for consideration with preference for rehire. All layoff applicants should contact their Employment Advisor. Special Selection Applicants: Apply by 10/13/2022….

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Bioinformatics Portal Engineer- PHP Backend/Frontend Developer at St. Jude Children’s Research Hospital in Memphis, Tennessee

Job Description: Overview The department of Computational Biology is seeking a highly motivated and experienced PHP Backend/Frontend Engineer to develop web-based applications used in St. Jude’s groundbreaking Clinical Genomics program. The PHP Backend/Frontend Engineer plays a key role in developing novel applications to empower scientists and clinicians at the forefront…

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Bioinformatics Programmer II – Hybrid/Remote – 119126 at UC San Diego Health System

This position will remain open until a successful candidate has been identified. UCSD Layoff from Career Appointment: Apply by 10/03/2022 for consideration with preference for rehire. All layoff applicants should contact their Employment Advisor. Special Selection Applicants: Apply by 10/13/2022. Eligible Special Selection clients should contact their Disability Counselor for…

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Sr. Bioinformatics-Clinical Database Developer – CBL Path, Inc

Job Functions, Duties, Responsibilities and Position Qualifications: POSITION TITLE:Senior Bioinformatics-Clinical Database Developer STANDARDIZED JOB TITLE: Database Development, Web Application Development, and Clinical Analytics EXEMPT STATUS:  Exempt POSITION SUMMARY: Sr. Database Developer works with cross-functional groups & Medical Leadership for developing a databases for a clinical assays. The candidate is expected…

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RPostgreSQL connections are expired as soon as they are initiated with doParallel clusterEvalQ

I was able to reproduce your problem locally. I am not entirely sure but I think the problem is related to the way clusterEvalQ works internally. For example, you say that dbGetQuery(con, “select inet_client_port()) gave you the client port output. If the query was actually evaluated/executed on the cluster nodes…

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Recent questions tagged fasta – Q&A

Most popular tags python javascript html java css reactjs c# php r sql arrays pandas c++ android jquery DataFrame python-3.x node.js c mysql list flutter JSON ios typescript sql-server swift string angular regex laravel excel django dictionary dart bash numpy postgresql loops oracle vba linux angularjs function for-loop spring spring-boot…

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Senior Research Associate/Principal Research Associate, Bioinformatics job with Vedanta Biosciences

Title: Senior Research Associate/Principal Research Associate, Bioinformatics Location: Cambridge, MA, or up to 100% remote Reports to: Scientist I, Bioinformatics The Role: We are looking for a bioinformatician/computational biologist to support the Research and Development team in the maintenance and querying of an existing laboratory information management system (LIMS), construction…

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Single cell database scrna dB for bioinformatics database development (1)

Single cell database construction High quality integrated single cell database If readers just want to get a ready-made single-cell database with rich content and add it to their own PC or linux The server , You can skip the following detailed theoretical tutorial Database download link : Click to download…

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Scientist III, Bioinformatics – Services Lab

Job Description Job Description: *Job Title: Scientist III, Bioinformatics – Services Lab* *Requisition ID: 175587* Thermo Fisher Scientific Inc. is the world leader in serving science, with annual revenue exceeding $25 billion. Our Mission is to enable our customers to make the world healthier, cleaner and safer. Whether our customers…

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Roche hiring Sr Bioinformatics Scientist in Cambridge, Massachusetts, United States

SUMMARY We are seeking a talented and motivated Senior Bioinformatics Scientist who will be an integral member of the Sequencing team contributing to the support and development of ground-breaking next-generation sequencing (NGS) products. As a member of Roche’s Sequencing and Life Science (SLS), Scientific Support and Applications team, you will…

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