Tag: psgendb

Index of /~psgendb/doc/local/pkg/EMBOSS/linux-x86_64/share/EMBOSS/test/genbank

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Index of /~psgendb/birchhomedir/dbbias/lengths

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Index of /~psgendb/birchhomedir/java/Mesquite_Folder/examples/Correlation

Name Last modified Size Description Parent Directory   –   00-introduction.nex 2017-09-10 13:17 1.5K   00a-FelsensteinsCont..> 2017-09-10 13:17 13K   00b-pagel94Hominids.nex 2018-05-04 16:44 11K   00c-pairwiseIntro.nex 2017-09-10 13:17 1.7K   01-pairwise.nex 2017-09-10 13:17 13K   02-pairwiseFig2(1).nex 2017-09-10 13:17 8.6K   03-pairwiseFig2(2).nex 2017-09-10 13:17 8.5K   04-pairwiseFig2(3).nex 2017-09-10 13:17 8.5K  …

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Index of /~psgendb/birchhomedir/tutorials/bioLegato/getgenome

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Index of /~psgendb/birchhomedir/admin/launchers/biolegato.app/Contents/Resources/pkg/transrate/bin

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Index of /~psgendb/birchhomedir/FTP/doc/local/bin-linux-x86_64

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Index of /~psgendb/birchhomedir/public_html/doc/pkg/samtools/test/markdup

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Index of /~psgendb/birchhomedir/R/x86_64-redhat-linux-gnu-library/3.4/BiocParallel/html

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Index of /~psgendb/birchhomedir/R/x86_64-redhat-linux-gnu-library/3.4/bit64/html

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Index of /~psgendb/birchhomedir/BIRCHDEV/dat/mesquite/examples/Correlation

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Index of /~psgendb/birchhomedir/python/biopython-1.68/Tests/Exonerate

Name Last modified Size Description Parent Directory   –   exn_22_m_affine_loca..> 2016-08-25 06:38 9.9K   exn_22_m_cdna2genome..> 2016-08-25 06:38 14K   exn_22_m_coding2codi..> 2016-08-25 06:38 18K   exn_22_m_coding2codi..> 2016-08-25 06:38 2.8K   exn_22_m_coding2geno..> 2016-08-25 06:38 18K   exn_22_m_dna2protein..> 2016-08-25 06:38 776   exn_22_m_est2genome.exn 2016-08-25 06:38 9.6K   exn_22_m_genome2geno..> 2016-08-25 06:38 10K  …

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Index of /~psgendb/birchhomedir/lib-linux-x86_64/trinityrnaseq-v2.14.0

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Index of /~psgendb/birchhomedir/BIRCHDEV/public_html/doc/BIRCH/doc/pkg/acedb/wspec

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Index of /~psgendb/birchhomedir/public_html/doc/local/pkg/PathVisio/modules/org.pathvisio.gex/build/org/pathvisio/gexplugin

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Index of /~psgendb/birchhomedir/public_html/doc/pkg/spades/osx-x86_64/share/spades/spades_pipeline/scripts

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Index of /~psgendb/birchhomedir/local/pkg/ugene/data/cmdline

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Index of /~psgendb/birchhomedir/GenBank/workspace/reads/454/reads.TrimmomaticSL8Q10m50

Name Last modified Size Description Parent Directory   –   454.Trimmomatic.fq 2021-06-10 20:02 1.7G   454stats.tsv 2021-06-05 12:04 257   GQ8KZ7F02_S.fastq 2021-06-05 12:03 558M   GQ8KZ7F02_S_fastqc.html 2021-06-05 12:06 280K   GQ8KZ7F02_S_fastqc.zip 2021-06-05 12:06 315K   GRAEVHH01_S.fastq 2021-06-05 12:03 576M   GRAEVHH01_S_fastqc.html 2021-06-05 12:06 329K   GRAEVHH01_S_fastqc.zip 2021-06-05 12:06 383K  …

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Index of /~psgendb/birchhomedir/public_html/doc/local/pkg/MeV_4_8_0/documentation/manual

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Index of /~psgendb/birchhomedir/public_html/doc/local/pkg/RepeatMasker/Libraries/20110419/general

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Index of /~psgendb/doc/pkg/samtools-1.7/htslib-1.7/cram

Name Last modified Size Description Parent Directory   –   cram.h 2015-06-24 11:00 2.4K   cram_codecs.c 2017-09-26 09:28 50K   cram_codecs.h 2016-03-17 07:48 6.0K   cram_codecs.o 2018-03-04 16:57 175K   cram_decode.c 2018-01-26 05:33 84K   cram_decode.h 2013-10-16 06:15 3.4K   cram_decode.o 2018-03-04 16:57 236K   cram_encode.c 2017-07-03 16:45 87K  …

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Index of /~psgendb/birchhomedir/public_html/doc/pkg/acedb/whelp/AQL/Tutorial

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Index of /~psgendb/birchhomedir/public_html/doc/local/biopython-1.55.old/Tests/SwissProt

Name Last modified Size Description Parent Directory   –   keywlist.txt 2010-10-07 10:28 3.2K   keywlist2.txt 2010-10-07 10:28 1.3K   sp001 2010-10-07 10:28 3.2K   sp002 2010-10-07 10:28 2.7K   sp003 2010-10-07 10:28 6.9K   sp004 2010-10-07 10:28 4.7K   sp005 2010-10-07 10:28 2.3K   sp006 2010-10-07 10:28 2.4K  …

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Index of /~psgendb/birchhomedir/public_html/doc/pkg/samtools-1.7/htslib-1.7/htslib

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Index of /~psgendb/birchhomedir/public_html/doc/spades/pyyaml3

Name Last modified Size Description Parent Directory   –   __init__.py 2016-12-30 10:41 9.4K   composer.py 2016-12-30 10:41 4.8K   constructor.py 2016-12-30 10:41 25K   cyaml.py 2016-12-30 10:41 3.2K   dumper.py 2016-12-30 10:41 2.7K   emitter.py 2016-12-30 10:41 42K   error.py 2016-12-30 10:41 2.5K   events.py 2016-12-30 10:41 2.4K  …

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Index of /~psgendb/birchhomedir/public_html/doc/pkg/samtools-1.7/misc

Name Last modified Size Description Parent Directory   –   HmmGlocal.java 2014-08-01 09:48 9.0K   ace2sam.c 2016-05-10 08:11 11K   blast2sam.pl 2017-09-14 10:20 5.2K   bowtie2sam.pl 2014-08-18 14:29 3.3K   export2sam.pl 2014-08-01 09:48 18K   interpolate_sam.pl 2014-08-18 14:29 6.0K   maq2sam.c 2017-12-12 11:10 7.2K   md5fa.c 2017-07-24 09:15 2.8K  …

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Index of /~psgendb/birchhomedir/public_html/doc/local/pkg/PathVisio

Name Last modified Size Description Parent Directory   –   CHANGELOG.txt 2007-09-14 15:09 760   CONTRIBUTORS.txt 2012-02-23 23:59 276   LICENSE-2.0.txt 2006-12-01 12:58 11K   MAPPTmpl.gtp 2006-10-13 19:57 180K   NOTICE.txt 2011-10-04 08:53 1.4K   PathVisio.ipr 2009-10-28 14:17 38K   XMLSchema.xsd 2006-08-23 07:33 86K   apidoc/ 2012-03-08 16:50 –  …

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Index of /~psgendb/birchhomedir/admin/launchers/biolegato.app/Contents/Resources/local/java/TIGR/MeV_4_6_1/R-2.9.1/library/spatial/html

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Index of /~psgendb/doc/local/java/MAExplorer/lib/MAERlibr/man

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Index of /~psgendb/doc/pkg/cd-hit-v4.8.1-2019-0228/doc

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Index of /~psgendb/doc/pkg/last/doc

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Index of /~psgendb/birchhomedir/BIRCHDEV/public_html/doc/pkg/acedb4.9.27/winfo/Newsletters/Year2002

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Index of /~psgendb/doc/local/pkg/staden/lib/tcl/encoding

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Index of /~psgendb/birchhomedir/BIRCHDEV/tutorials/bioLegato/genome_assembly/Assembly

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Index of /~psgendb/doc/local/pkg/staden_2002.0/src/g

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Index of /~psgendb/local/install/T-COFFEE_distribution_Version_8.14/bin/download/distributions/probcons/probcons

Name Last modified Size Description Parent Directory   –   CompareToRef.cc 2004-07-13 16:04 9.0K   Defaults.h 2004-07-13 16:04 5.4K   EvolutionaryTree.h 2004-07-13 16:04 5.9K   FileBuffer.h 2004-07-13 16:04 2.6K   FixRef.cc 2004-07-13 16:04 35K   Main.cc 2007-04-03 12:37 52K   MakeGnuPlot.cc 2007-04-03 12:37 1.5K   Makefile 2007-04-03 12:39 2.1K  …

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Index of /~psgendb/local/biopython-1.55.old/Scripts/xbbtools

Name Last modified Size Description Parent Directory   –   nextorf.py 2010-10-07 10:28 9.1K   test.fas 2010-10-07 10:28 517   testrp.fas 2010-10-07 10:28 50K   xbb_blast.py 2010-10-07 10:28 4.7K   xbb_blastbg.py 2010-10-07 10:28 2.3K   xbb_help.py 2010-10-07 10:28 2.2K   xbb_search.py 2010-10-07 10:28 5.0K   xbb_sequence.py 2010-10-07 10:28 399  …

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Index of /~psgendb/doc/pkg/NCBI/errmsg

Name Last modified Size Description Parent Directory   –   a2ferr.msg 2011-05-17 19:57 3.8K   flat2asn.msg 2011-05-17 19:57 13K   htgs.msg 2011-05-17 19:57 739   indx_err.msg 2011-05-17 19:57 4.2K   medarch.msg 2011-05-17 19:57 356   pir2asn.msg 2011-05-17 19:57 2.2K   taxarch.msg 2011-05-17 19:57 142   taxutil.msg 2011-05-17 19:57 142  …

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Index of /~psgendb/birchhomedir/lib-linux-x86_64/python/lib64/python3.5/site-packages/numpy

Name Last modified Size Description Parent Directory   –   LICENSE.txt 2020-01-17 17:07 2.3K   __config__.py 2020-01-17 17:07 2.0K   __init__.py 2020-01-17 17:07 8.7K   __pycache__/ 2020-01-17 17:09 –   _distributor_init.py 2020-01-17 17:07 331   _globals.py 2020-01-17 17:07 2.3K   _pytesttester.py 2020-01-17 17:07 6.8K   compat/ 2020-01-17 17:09 –  …

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Index of /~psgendb/doc/local/pkg/gde/tutorials/dotmatrix

Name Last modified Size Description Parent Directory   –   4719.COMFILE 2006-11-25 14:27 96   5631.COMFILE 2006-11-25 14:30 96   ARBLKSP-oppvsKPLACBG..> 2000-01-28 22:06 5.8K   ARBLKSP.gen 2000-11-06 17:37 5.3K   ARBLKSPvsKPLACBG.dxhom 2000-01-28 22:06 5.8K   ARBLKSPvsKPLACBG.gif 2000-01-28 22:06 14K   GMCAB2.gen 2006-11-25 13:22 4.4K   GMCAB2vsGMCAB3.dxhom.1 2000-01-28 22:06 21K  …

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Index of /~psgendb/doc/pkg/last/src

Name Last modified Size Description Parent Directory   –   Alignment.cc 2021-04-13 03:43 16K   Alignment.hh 2021-04-13 03:43 7.0K   AlignmentPot.cc 2021-04-13 03:43 703   AlignmentPot.hh 2021-04-13 03:43 2.1K   AlignmentWrite.cc 2021-04-13 03:43 22K   Alphabet.cc 2021-04-13 03:43 3.6K   Alphabet.hh 2021-04-13 03:43 2.3K   Centroid.cc 2021-04-13 03:43 20K  …

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Index of /~psgendb/doc/bioLegato/blreads

Name Last modified Size Description Parent Directory   –   SOAPdenovo2.hints.html 2019-05-04 15:52 3.9K   Trimmomatic.hints.html 2019-05-20 13:32 6.3K   Trinity.hints.html 2019-04-23 11:39 2.4K   adaptercheck.hints.html 2021-05-13 12:27 8.0K   adaptercheck.html 2021-05-12 17:45 4.9K   adaptercheck_output.png 2021-05-12 17:17 51K   fastq_pair.hints.html 2019-04-05 13:16 3.4K   gffcompare.hints.html 2018-07-18 14:05 3.2K  …

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Index of /~psgendb/birchhomedir/dat/blpalign/seqcolors

Name Last modified Size Description Parent Directory   –   color_notes.txt 2010-03-30 13:29 790   csv2pcd.sh 2014-06-23 17:18 917   default.csv 2010-06-02 17:02 109   protein_CysMet.csv 2010-10-04 17:00 82   protein_buried.csv 2010-06-02 17:02 240   protein_chymotrypsin..> 2016-03-15 13:07 73   protein_helix.csv 2010-06-02 17:02 240   protein_hydrophobici..> 2010-06-02 17:02 240  …

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Index of /~psgendb/birchhomedir/doc/local/pkg/PathVisio2.0.11/modules

Name Last modified Size Description Parent Directory   –   org.pathvisio.core.jar 2012-03-08 16:50 1.4M   org.pathvisio.core/ 2012-03-08 16:50 –   org.pathvisio.deskto..> 2012-03-08 16:50 238K   org.pathvisio.desktop/ 2012-03-08 16:50 –   org.pathvisio.gex/ 2012-03-08 16:50 –   org.pathvisio.gexplu..> 2012-03-08 16:50 53K   org.pathvisio.gui.jar 2012-03-08 16:50 208K   org.pathvisio.gui/ 2012-03-08 16:50 –  …

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