Tag: Pybedtools

bedops bedmap operation in python 1 I noticed there is a conda version of bedops bedmap function available. I’ve been struggling to use it though. Could someone refer me to any documentation of it’s usage in a python script please. Have a great day. Thanks in advance. python bedops bedmap…

Bedtools – converting multiple bam files to bed 1 Hi all, I have previous experience in R, but since some months ago I am trying new things in Python (JupyterLab). I have a a directory with different files. Some of them are ‘.bam’ files. My objective is to obtain ‘.bed’…

Pybedtools error sans 20-08-2021 pysam – Error when I install samtools for python on windows – i trying install pysam, pybedtools modules on python got error: ($i=1; $i[email protected] temp]$ conda install pysam bedtools hisat2 [ snip. However,…