Tag: QA

Lamentamos pelo inconveniente. University of Arizona Tucson, AZ (Onsite) Full-Time. Experience in conducting laboratory work by utilizing tools in molecular biology and microbiology. Sie weiterhin diese Meldung erhalten, informieren Sie uns darber bitte per E-Mail Se continui a visualizzare The Bioinformatics Analyst position will work closely with the PI and…

Funding Support and Acknowledgements: COPDGene: The project described was supported by Award Number U01 HL089897 and Award Number U01 HL089856 from the National Heart, Lung, and Blood Institute. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Heart, Lung,…

uBriGene has years of experience in developing cell therapy products, manufacturing GMP cell therapy products and well-rounded QA and QC systems to meet regulatory requirements. We provide clients with CDMO services such as stem cell production technique development, manufacturing, quality testing, and IND application documentation. We provide one-stop services including…

Optavise, a CNO Financial Group Company is seeking a Developer to complete small to medium sized projects with low to moderate supervision. Often the source of advice, the Developer will offer thought leadership to achieve strategies and objectives and resolve impediments. This role should be motivated and ready to mentor…

I have the task to answer a question given a related context where the answer is in. The data is structured like this: “context”: “some long interesting text”, “question”: “number showing how many atoms or molecules of a given element or compound are involved in a chemical”, “answers”: { “answer_start”:…

How can I filter a vcf filter a VCF file on minimum genotype depth and genotype quality for each sample. I am looking for a way to filter variants from a VCF file by checking that all samples for a site pass 2 critera sample.DP > 10 sample.GQ > 15…

Hi everyone! For the FIRST MEETUP in the month of June 2023, we have Erwin, Google’s Machine Learning Tech Lead to share with us. Agenda6.30pm – 7.00pm: Registration7.00pm – 7.10pm: Intro by Google DevSpace SG7.10pm – 7.50pm: How to build a Stackoverflow QA system using Vertex AI Embeddings API and…

The company has gained hundreds of paying customers through product-led growth SAN FRANCISCO, May 24, 2023 /PRNewswire/ — WireMock today announced that it has raised $6.5 million in seed funding for WireMock Cloud, the first API developer productivity platform. The funding round was led by Ridge Ventures joined by First…

Posted by hagansa2 on Wednesday, May 17, 2023 in Job Opportunities . The Bioinformatics Engineer will have the opportunity to support cutting edge clinical oncology diagnostic pipelines supporting high quality patient care as well as drug development, clinical trials, and translational research. They will be responsible for contributing to software…

Project Profile Get all the information on the Cordero Expansion (Phase 3), a Mining & Metals project. Connect with the contracted companies and their key contacts, track the project stage and milestones, read related news and more. Some issues around this topic are: Silver,  Zinc,  Lead,  Open pit mining and Gold….

Generative AI is changing the way we work at breakneck speed. It’s given both consumers and businesses a new level of velocity and ease of use in our daily tasks, and there seem to be more and more use cases for AI in the workplace every day. Whether you’re using…

Amidst the slow but steady growth, India has a long road ahead to become a master in the NGS market India is making huge strides in the next-generation sequencing (NGS) market. It has to be remembered that the sequencing of the SARS-CoV-2 has helped to develop vaccines in record time,…

In this interview conducted at Pittcon 2023 in Philadelphia, Pennsylvania, we spoke to this year’s recipient of the Pittsburgh Spectroscopy Award, Robert Tycko. Could you introduce yourself and tell me a little bit about your personal background and what first attracted you to this field? I am Rob Tycko, a…

Job Title: Bioinformatics QA with NGS Location : South San Francisco (ideal), probably remote depends on the resources availability. Duration : 6+Months Contract Job Description Role Scope / Deliverables:Representing software in program core team and interacting with colleagues from diverse functions such as molecular biologist, algorithm developers and product manager….

Hi all,Can I perform RNAseq analysis on samples in FastQ format and samples in BAMs format at the same time? since I cannot convert BAMs back to FastQ because I do not know the tools used to generate these BAMs. jennaj April 13, 2023, 12:08am 2 Hi @wmsalsah wmsalsah: Can…

Gmx_QA April 14, 2023, 11:04am 1 GROMACS version: 2021.5GROMACS modification: No Hi! I am trying the seemingly simple task of pulling a molecule through a bilayer using the pull-code + awh, but I am confused about some of the options, and how they influence each other. The initial setup I…

Source: geoalchemy2 Version: 0.13.1-2 Severity: serious Tags: sid bookworm bookworm-ignore User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of geoalchemy2 the autopkgtest of geoalchemy2 fails in testing on s390x when that autopkgtest is run with the binary packages of geoalchemy2 from unstable. It passes when run with only…

Published March 30, 2023 The Collision Industry Electronic Commerce Association (CIECA) announced March 30 a special guest speaker—Darrel Miller, API architect at Microsoft—will present during the next CIECA Technical Webinar.  The presentation, “Open API Development Best Practices & Lessons Learned,” will take place at 11 a.m. PT/1 p.m. CT/2 p.m….

bugzilla.redhat.com/show_bug.cgi?id=2179414 Bug ID: 2179414 Summary: Review Request: python-scikit-build-core – Build backend for CMake based projects Product: Fedora Version: rawhide Hardware: All OS: Linux Status: NEW Component: Package Review Severity: medium Assignee: nobody@xxxxxxxxxxxxxxxxx Reporter: redhat@xxxxxxxxx QA Contact: extras-qa@xxxxxxxxxxxxxxxxx CC: package-review@xxxxxxxxxxxxxxxxxxxxxxx Target Milestone: — Classification: Fedora Spec URL: download.copr.fedorainfracloud.org/results/lecris/fedora-scikit-build-core/fedora-38-aarch64/05656194-python-scikit-build-core/scikit-build-core.spec SRPM URL: download.copr.fedorainfracloud.org/results/lecris/fedora-scikit-build-core/fedora-38-aarch64/05656194-python-scikit-build-core/python-scikit-build-core-0.2.2-1.fc38.src.rpm…

Source: pywebdav Version: 0.9.14-1 Severity: important Control: close -1 0.10.0-1 Tags: sid bookworm User: release.debian….@packages.debian.org Usertags: out-of-sync Control: block -1 by 1029283 Dear maintainer(s), The Release Team considers packages that are out-of-sync between testing and unstable for more than 60 days as having a Release Critical bug in testing [1]….

About Chris Graham is a QA Engineer at Academy at RStudio. Chris has previously worked as a Software Engineer In Test at Cisco, a Software QA Engineer at VitalSource Technologies, and a Software QA Engineer at Eastman Kodak. Chris has also worked as a Software QA Engineer at Source Audio…

Why 0/0 genotype refers to SNP and ALT != REF (in vcf file after freebayes) 1 Good morning, Could you please explain me, why 0/0 genotypes in vcf are SNPs? According to this description of GT: 0/0 the sample is a homozygous reference 0/1 the sample is heterozygous (carries both…

On Fri, 03 Mar 2023 at 17:41:22 +0100, Sylvestre Ledru wrote: > Le 16/01/2023 à 16:44, Adrian Bunk a écrit : > > /usr/include/wasm32-wasi/c++/v1/__type_traits/is_array.h:40:22: error: > > reference to unresolved using declaration > > template <class _Tp, size_t _Np> struct _LIBCPP_TEMPLATE_VIS > > is_array<_Tp[_Np]> > > ^ > > /usr/include/wasm32-wasi/c++/v1/cstddef:52:1: note:…

Question: Design matrix (DESeq2) 0 Hey folks, I want to ask whether I should conduct pairwise contrasts of my tissues in DESeq2, or whether I should test the tissue of interest against a background geneset. I have tissue-specific counts from RNA-Seq data (triplicates). I want to analyse differential gene expression…

The Sheba Medical Center in Israel has an advanced hemato-oncology center that offers in-house CAR T-cell therapy, the revolutionary immunotherapy that alters a patient’s white blood cells to kill cancer cells.  By keeping the entire process at the hospital, and not sending the cells to an external lab, the quality…

QID 983223: Python (pip) Security Update for oauthenticator (GHSA-384w-5v3f-q499) QID 983223: Python (pip) Security Update for oauthenticator (GHSA-384w-5v3f-q499) Security update has been released for oauthenticator to fix the vulnerability. Note: The preceding description block is extracted directly from the security advisory. Using automation, we have attempted to clean and format…

All autopkgtests for the newly accepted nvidia-graphics-drivers-515-server (515.86.01-0ubuntu0.22.10.2) for kinetic have finished running. The following regressions have been reported in tests triggered by the package: nvidia-graphics-drivers-515-server/515.86.01-0ubuntu0.22.10.2 (amd64) Please visit the excuses page listed below and investigate the failures, proceeding afterwards as per the StableReleaseUpdates policy regarding autopkgtest regressions [1]. people.canonical.com/~ubuntu-archive/proposed-…

Source: findent Version: 4.2.5-1 Severity: serious User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of findent the autopkgtest of findent fails in testing when that autopkgtest is run with the binary packages of findent from unstable. It passes when run with only packages from testing. In tabular form:…

One of the most frustrating things for consumers is when an API is not behaving as documented. No team sets out to ship versions of their API that are out of sync with the documentation — it happens because verifying API behavior is hard. With Optic you can verify the…

Greetings from IDESLABS, This is Krishna We have Immediate Openings on “ Bioinformatics QA “ For Client NTT DATA BANGALORE Location Job Details Skill: Bioinformatics QA Experience: 5+ Years Location: – BANGALORE Notice Period: Immediate Joiners Employee type: C2H Please Share your Updated CV’s : careers@ideslabs.com Spoc Sandeep: sandeep.p@ideslabs.com Swarna:…

COPDGene Phase 3: Grant Support and Disclaimer: The project described was supported by Award Number U01 HL089897 and Award Number U01 HL089856 from the National Heart, Lung, and Blood Institute. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National…

HAMPTON, England–(BUSINESS WIRE)–Touchlight, a biotechnology company pioneering enzymatic DNA production to enable genetic medicines, today announced a ground-breaking new milestone for its enzymatic doggybone DNA (dbDNA™), following the FDA acceptance of the Drug Master File (DMF) for GMP grade dbDNA. This achievement marks the first time a DMF has been…

Source: pigx-rnaseq Version: 0.1.0-1.1 Severity: serious Justification: FTBFS Tags: bookworm sid ftbfs User: lu…@debian.org Usertags: ftbfs-20230113 ftbfs-bookworm Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > input: > /<<PKGBUILDDIR>>/tests/output/feature_counts/raw_counts/hisat2/counts.tsv, > /<<PKGBUILDDIR>>/tests/output/colData.tsv > output: > /<<PKGBUILDDIR>>/tests/output/report/hisat2/analysis1.deseq.report.html > log: /<<PKGBUILDDIR>>/tests/output/logs/hisat2/analysis1.report.log >…

Source: davmail Version: 6.0.1.3390-5 Severity: serious User: debi…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of davmail the autopkgtest of davmail fails in testing when that autopkgtest is run with the binary packages of davmail from unstable on arm64, armhf and ppc64el. It passes when run with only packages…

If you’re looking to boost your market value, advance your career, and earn more money in the coming year, the best advice is to follow the money. Specifically, CIOs’ long-term investments in cloud services, cyber and information security and Big Data/data analytics have boosted the fortunes of professionals who possess…

bugzilla.redhat.com/show_bug.cgi?id=2156243 Bug ID: 2156243 Summary: Review Request: python-scikit-build – Improved build system generator for CPython extensions Product: Fedora Version: rawhide Status: NEW Component: Package Review Assignee: nobody@xxxxxxxxxxxxxxxxx Reporter: troy@xxxxxxxxxxxxxxxx QA Contact: extras-qa@xxxxxxxxxxxxxxxxx CC: package-review@xxxxxxxxxxxxxxxxxxxxxxx Target Milestone: — Classification: Fedora Spec URL: troycurtisjr.fedorapeople.org/python-scikit-build/python-scikit-build.spec SRPM URL: troycurtisjr.fedorapeople.org/python-scikit-build/python-scikit-build-0.16.3-1.fc38.src.rpm Description: Improved build system generator…

The Position Genentech, a member of the Roche group and founder of the biotechnology industry, is dedicated to pursuing groundbreaking science to discover and develop medicines for people with serious and life-threatening diseases. To solve the world’s most complex health challenges, we ask bigger questions that challenge our industry and…

Source: lintian-brush Version: 0.134 Severity: serious User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of lintian-brush the autopkgtest of lintian-brush fails in testing when that autopkgtest is run with the binary packages of lintian-brush from unstable. It passes when run with only packages from testing. In tabular form:…

Not everyone who completes a life sciences PhD wants to continue working in a laboratory or in research. They may just have grown out of it or found that the work isn’t what they thought it was. Or maybe they still love science and would rather find a different way…

Source: rope Version: 1.2.0-1 Severity: serious User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of rope the autopkgtest of rope fails in testing when that autopkgtest is run with the binary packages of rope from unstable. It passes when run with only packages from testing. In tabular form:…

Hi, I’d like to point out to this serious bug. Steffen, would you mind koordinating (not doing alone) an upgrade of the qiime infrastructure to make sure everything will go smoothly? Kind regards Andreas. Am Thu, Jun 30, 2022 at 11:30:21AM +0200 schrieb Paul Gevers: > Source: qiime > Version:…

Source: python-xarray Version: 2022.06.0~rc1-1 Severity: serious User: debi…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of python-xarray the autopkgtest of python-xarray fails in testing when that autopkgtest is run with the binary packages of python-xarray from unstable. It passes when run with only packages from testing. In tabular form: …

Transcript Lane: I’d like to share with you a high level view of why API specifications matter. How OpenAPI, AsyncAPI, JSON Schema and others are helping us standardize and deliver API lifecycle in a way that the machines understand. Also, allows us humans to better communicate, collaborate, and move forward…

Details Posted: 22-Apr-22 Location: Chicago, Illinois Type: Full-time Salary: Open Categories: Research – Laboratory/Non-Laboratory Staff/Administrative Location: Hyde Park Campus Job Description: Leads a team of bioinformaticians and provides technical guidance for the team to follow best practices and deliver data production timely. Collaborates cross-functionally with our user services, software engineering,…

Source: opm-grid Version: 2021.10-3 Severity: serious User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of opm-grid the autopkgtest of opm-grid fails in testing when that autopkgtest is run with the binary packages of opm-grid from unstable. It passes when run with only packages from testing. In tabular form:…

Source: golang-github-albenik-go-serial Version: 2.5.0-1 Severity: serious User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of golang-github-albenik-go-serial the autopkgtest of golang-github-albenik-go-serial fails in testing when that autopkgtest is run with the binary packages of golang-github-albenik-go-serial from unstable. It passes when run with only packages from testing. In tabular form:…

#1008368 – pigx-rnaseq: FTBFS: configure: error: R package rmarkdown not found. – Debian Bug report logs Reported by: Lucas Nussbaum <lucas@debian.org> Date: Sat, 26 Mar 2022 21:12:04 UTC Severity: serious Tags: bookworm, ftbfs, sid Found in version pigx-rnaseq/0.0.19-2 Reply or subscribe to this bug. Toggle useless messages Report forwarded to…

All autopkgtests for the newly accepted nvidia-graphics-drivers-390 (390.147-0ubuntu0.18.04.1) for bionic have finished running. The following regressions have been reported in tests triggered by the package: nvidia-graphics-drivers-390/390.147-0ubuntu0.18.04.1 (i386) Please visit the excuses page listed below and investigate the failures, proceeding afterwards as per the StableReleaseUpdates policy regarding autopkgtest regressions [1]. people.canonical.com/~ubuntu-archive/proposed-…

Source: ocrad Version: 0.27-2 Severity: serious Control: close -1 0.28-1 Tags: sid bookworm User: release.debian….@packages.debian.org Usertags: out-of-sync Control: block -1 by 1004508 Dear maintainer(s), The Release Team considers packages that are out-of-sync between testing and unstable for more than 60 days as having a Release Critical bug in testing [1]….

#1007732 – ccache: autopkgtest regression: cannot execute ‘cc1plus’ – Debian Bug report logs Reply or subscribe to this bug. Toggle useless messages Report forwarded to debian-bugs-dist@lists.debian.org, Joel Rosdahl <joel@debian.org>:Bug#1007732; Package src:ccache. (Tue, 15 Mar 2022 20:27:05 GMT) (full text, mbox, link). Acknowledgement sent to Paul Gevers <elbrus@debian.org>:New Bug report received…

#1007013 – freecad: autopkgtest regression on arm64 and armhf: syntax error – Debian Bug report logs Reply or subscribe to this bug. Toggle useless messages Report forwarded to debian-bugs-dist@lists.debian.org, Debian Science Maintainers <debian-science-maintainers@lists.alioth.debian.org>:Bug#1007013; Package src:freecad. (Thu, 10 Mar 2022 14:21:07 GMT) (full text, mbox, link). Acknowledgement sent to Paul Gevers…

Source: python-munch Version: 2.5.0-1 Severity: serious User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of python-munch the autopkgtest of python-munch fails in testing when that autopkgtest is run with the binary packages of python-munch from unstable. It passes when run with only packages from testing. In tabular form:…

Quality Assurance Manager- Molecular NGS, PCR, IVD Quality Assurance ManagerHouston TX NuProbe USA Inc. is looking for a Quality Assurance Manager to lead the Quality program to establish and maintain compliance to ISO: 9001, ISO: 13485, and FDA 21 CFR Part 820 Quality System Regulations. NuProbe USA is a rapidly…

Source: django-q Version: 1.3.9-2 X-Debbugs-CC: debian…@lists.debian.org Severity: serious User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of django-q the autopkgtest of django-q fails in testing when that autopkgtest is run with the binary packages of django-q from unstable. It passes when run with only packages from testing. In…

Source: autodock-vina Version: 1.2.3-1 X-Debbugs-CC: debi…@lists.debian.org Severity: serious User: debi…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of autodock-vina the autopkgtest of autodock-vina fails in testing when that autopkgtest is run with the binary packages of autodock-vina from unstable. It passes when run with only packages from testing. In…

We are seeking a Machine Learning Developer to build tools that use a combination of text mining methods and Europe PMC services to support database curation. The role will be based in the Literature Services Team at EMBL-EBI Europe PMC is the largest open access database of life science research…

Your message dated Sat, 22 Jan 2022 21:52:05 +0100 with message-id <f98ce279-5828-d2b5-8b7c-88287a3ab…@debian.org> and subject line Re: Bug#997845: bug 997845 has caused the Debian Bug report #997845, regarding growlight: autopkgtest regression: log repeats until it times out to be marked as done. This means that you claim that the problem has…

Source: aide Version: 0.17.3-6 X-Debbugs-CC: debi…@lists.debian.org Severity: serious User: debi…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of aide the autopkgtest of aide fails in testing when that autopkgtest is run with the binary packages of aide from unstable. It passes when run with only packages from testing. In…

Source: dulwich Version: 0.20.26-1 X-Debbugs-CC: debian…@lists.debian.org Severity: serious User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of dulwich the autopkgtest of dulwich fails in testing when that autopkgtest is run with the binary packages of dulwich from unstable. It passes when run with only packages from testing. In…

Hello to all I am trying to run bedtools intersect with vcf file and a bed file (my goal is to add the depth data to my VCF) I get an error running this command: bedtools intersect -a depth.bed -b fish.vcf -wa -wb > $out The error: “Error: Invalid record…

Source: wurlitzer Version: 3.0.2-3 X-Debbugs-CC: debian…@lists.debian.org Severity: serious User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of wurlitzer the autopkgtest of wurlitzer fails in testing when that autopkgtest is run with the binary packages of wurlitzer from unstable on ppc64el. It passes when run with only packages from…

#1001716 – src:minimap2: fails to migrate to testing for too long: autopkgtest regression – Debian Bug report logs Reported by: Paul Gevers <elbrus@debian.org> Date: Tue, 14 Dec 2021 20:03:02 UTC Severity: serious Tags: bookworm, sid Found in version minimap2/2.17+dfsg-12 Fixed in version minimap2/2.22+dfsg-3 Done: Paul Gevers <elbrus@debian.org> Reply or subscribe…

Source: node-trust-keyto Version: 2.0.0~alpha1-1 X-Debbugs-CC: debian…@lists.debian.org Severity: serious User: debian…@lists.debian.org Usertags: regression Dear maintainer(s), With a recent upload of node-trust-keyto the autopkgtest of node-trust-keyto fails in testing when that autopkgtest is run with the binary packages of node-trust-keyto from unstable. It passes when run with only packages from testing. In…

PyTorch is a deep learning framework that was created by Facebook. It allows you to use Python as your main programming language, which provides flexibility and speed for many programmers who work with machine learning tasks. PyTorch is also GPU-accelerated, which makes it preferable for many users. This blog post…

Source: minimap2 Version: 2.17+dfsg-12 Severity: serious Control: close -1 2.22+dfsg-3 Tags: sid bookworm User: release.debian….@packages.debian.org Usertags: out-of-sync Dear maintainer(s), The Release Team considers packages that are out-of-sync between testing and unstable for more than 60 days as having a Release Critical bug in testing [1]. Your package src:minimap2 has been…

Chugai Files for Additional Indication of Polivy for Previously Untreated Diffuse Large B-cell Lymphoma Polivy plus R-CHP significantly improved outcomes in previously untreated diffuse large B-cell lymphoma (DLBCL) compared to the standard of care for the first time in 20 years Filing…

Company Description Addgene is a thriving nonprofit founded in 2004 that facilitates biomedical research and discovery. Our biorepository stores, archives, and distributes plasmids for scientists around the world. Addgene’s plasmid collection is used to advance research in a wide variety of disciplines, including cancer, heart disease, and neurodegenerative disorders, and…

About PersistentWe are a trusted Digital Engineering and Enterprise Modernization partner, combining deep technical expertise and industry experience to help our clients anticipate what’s next. Our offerings and proven solutions create unique competitive advantage for our clients by giving them the power to see beyond and rise above. We are…

Position Description: Every great life-changing discovery begins the same way-with new knowledge. It can change everything, from a single life to the future of entire communities. That’s why academic medicine, and the continuous pursuit of knowledge, is at the center of everything we do…

Position Description: Every great life-changing discovery begins the same way-with new knowledge. It can change everything, from a single life to the future of entire communities. That’s why academic medicine, and the continuous pursuit of knowledge, is at the center of everything we do…

Imagine the human genome as a string stretching out for the length of a football field, with all the genes that encode proteins clustered at the end near your feet. Take two big steps forward; all the protein information is now behind you. The human genome has three billion base…

Hey, I am looking for a way to add samples ID names to the FORMAT in my vcf file. I have 10 sorted Bam files. I used Freebayes to create vcf files and my next step is merging all 10 files for VcfSampleCompare. And for that I need to define…

Gritstone bio is a public, next-generation immuno-oncology and infectious disease focused company. The company is leveraging its antigen discovery machine learning platform EDGETM to define targets for personalized and shared immuno-oncology therapies, as well as for developing vaccines for infectious diseases such as COVID-19. Gritstone bio is seeking a Bioinformatics…