Tag: query

rstudio package not found

Like last time, I deleted my previous versions of R but I still don’t get the prompt. You need to set your library path to a folder that exists. Error in print(nycflights13) : object ‘nycflights13’ not found, Tried restarting and updating r and r studio both. Heres how to do…

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GREENER principles for environmentally sustainable computational science

ESCS is an emerging field, but one that is of rapidly increasing importance given the climate crisis. In the following, our proposed set of principles (Fig. 1) outlines the main axes where progress is needed, where opportunities lie and where we believe efforts should be concentrated. Governance and responsibility Everyone…

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OpenAPI endpoint with an array parameter that has another array parameter nested inside – App Building

Hi there! We have an OpenAPI endpoint with a parameter that is typed the following way using Zod: sections: z.array( SectionSchema.merge( z.object({ questions: z.array( QuestionSchema.omit({ uuid: true }).merge( z.object({ content: QuestionContentSchema }) ) ) }) ) ) The details aren’t super important other than the fact that there is another…

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Announcing vector support in PostgreSQL services to power AI-enabled applications

Generative AI is ushering in a new wave of experiences that transform how we interact with information, brands, and one another. In the future, we believe that almost every application will be AI-driven, and developers who build these applications will need the right tools to build these new experiences into…

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How IT pros can benefit from generative AI safely

The enterprise IT landscape is littered with supposedly paradigm-shifting technologies that failed to live up to the hype, and intil now, one could argue that AI fell into that category. But generative AI, which has taken the world by storm in the form of OpenAI’s ChatGPT chatbot, just might be…

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Check if blastn gene matches are of entire genes or of parts of genes

Check if blastn gene matches are of entire genes or of parts of genes 0 Hello,I run blastn of specific bacterial genes against Klebsiella’s plasmids’ sequences.I need to check if the matches are of entire gene sequences, in order to filter out partial gene matches.The first thing I thought of…

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SRMJEEE 2023 Phase 3 Registration Ends Today, Apply Online On Srmist.edu.in

SRMJEEE 2023 Phase 3 Registration: The SRM Institute of Science and Technology (SRMIST) will conclude the registration process for the SRM Joint Engineering Entrance Examination (SRMJEEE) 2023 phase 3 today, June 26. Interested candidates can fill the application form for SRMJEEE 2023 phase 3 on the official website at srmist.edu.in….

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SRMJEEE 2023 phase 3 registration ends today; exam on July 1

Candidates can fill out the SRMJEEE 2023 phase 3 application form at srmist.edu.in. The SRMJEEE 2023 phase 3 exam will be held on July 1 (Source: Pexels) NEW DELHI: The SRM Institute of Science and Technology (SRMIST) will close the SRM Joint Engineering Entrance Examination (SRMJEEE) 2023 phase 3 registration…

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Real-time Analytics News for Week Ending June 24

In this week’s real-time analytics news: Databricks introduced Lakehouse Apps and teased some news to come from this week’s Data+AI Summit. Keeping pace with news and developments in the real-time analytics market can be a daunting task. We want to help by providing a summary of some of the important…

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DescribeResourceUsageDetail – BSS OpenAPI – Alibaba Cloud Documentation Center

object Code string The equivalent of pay-as-you-go costs. Success Message string The operation that you want to perform. Set the value to DescribeResourceUsageDetail. Successful! RequestId string The end of the time range in which the usage details were queried. 79EE7556-0CFD-44EB-9CD6-B3B526E3A85F Success boolean The maximum number of entries to return. Default…

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In pysam pileup, discrepancy between stepper all and stepper samtools reads

Dear all, I’ve not been able to understand from the documentation the precise differences in behavior between the steppers ‘all’ and ‘samtools’ in their default settings, which by the docs seem to indicate that they have the same filters engaged (BAM_FUNMAP | BAM_FSECONDARY | BAM_FQCFAIL | BAM_FDUP). Printed also base…

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LangChain, BigQuery, FreeCodeCamp, RailsGraph, and More

Welcome to this week’s newsletter! This week, you might take a look at Neo4j’s NaLLM project described in Tomaz Bratanic’s blog below.  The project focuses on two primary use cases – a natural language interface to a knowledge graph and creating a knowledge graph from unstructured data. If you are…

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Stream A Complete Guide to Download MNIST PyTorch and Build a Neural Network from James Gotti

published on 2023-06-24T12:34:30Z download mnist pytorch Download tinurli.com/2upynx Hi Folks, I have a query that how would you be able to load MNIST dataset from pytorch and filter out number 9 or 5 from it? I am learning pytorch so I would appreciate if you can share the code with…

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miR-27b targets MAIP1 to mediate lipid accumulation in cultured human and mouse hepatic cells

Williams, C. D. et al. Prevalence of nonalcoholic fatty liver disease and nonalcoholic steatohepatitis among a largely middle-aged population utilizing ultrasound and liver biopsy: a prospective study. Gastroenterology. 140, 124–131 (2011). Article  PubMed  Google Scholar  Portillo-Sanchez, P. et al. High prevalence of nonalcoholic fatty liver disease in patients with type…

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Prophecy’s generative AI assistant ushers in a new era of data pipeline automation

Join top executives in San Francisco on July 11-12, to hear how leaders are integrating and optimizing AI investments for success. Learn More Data engineering startup Prophecy is giving a new turn to data pipeline creation. Known for its low-code SQL tooling, the California-based company today announced data copilot, a…

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Pulsed Field Ablation (PFA) System Market is expected to Exhibit a Massive CAGR of 11% by 2029

PRESS RELEASE Published June 23, 2023 New Jersey, N.J, June. 23, 2023 (Digital Journal) – Pulsed Field Ablation (PFA) System is a medical device used in the field of cardiology for the treatment of cardiac arrhythmias. PFA is a non-thermal ablation technique that uses pulsed electric fields to create localized…

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MongoDB (MDB) Teams Up With Google Cloud for AI Integration

MongoDB MDB has announced a collaboration with Alphabet’s GOOGL Google Cloud to launch an initiative, which is aimed at facilitating the adoption of generative artificial intelligence (AI) and enabling the development of innovative applications. MongoDB Atlas, the multi-cloud developer data platform widely used by customers and developers worldwide, will play…

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3 AI Stocks to Invest In as Major Companies Ink New Partnerships

When looking for artificial intelligence (AI) stocks with new partnerships, the problem isn’t finding them; it’s trying to figure out whether these announcements make the companies AI stocks to invest in.  After all, if the advent of AI was a nine-inning baseball game, we’re only in the first couple of innings….

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MongoDB (MDB) Teams Up With Google Cloud for AI Integration – June 23, 2023

MongoDB (MDB Quick QuoteMDB – Free Report) has announced a collaboration with Alphabet’s (GOOGL Quick QuoteGOOGL – Free Report) Google Cloud to launch an initiative, which is aimed at facilitating the adoption of generative artificial intelligence (AI) and enabling the development of innovative applications. MongoDB Atlas, the multi-cloud developer data…

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A pipeline for sample tagging of whole genome bisulfite sequencing data using genotypes of whole genome sequencing | BMC Genomics

Sample collection and WGS DNA samples were obtained from the CNSR-III [17], a nationwide prospective registry for patients presented to hospitals with acute ischaemic cerebrovascular events between August 2015 and March 2018 in China. Written informed consent was obtained from all patients or legally authorized representatives before entering the study….

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Beefing Up A Cloudy NoSQL Database To Ride The AI Wave

To Andrew Davidson, senior vice president of products at MongoDB, the database business operates in an entirely different type of market than traditional software, where vendors might sell their products into one organization after another, eventually reaching a saturation point. They can grow fast, but it’s tough to keep that…

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MongoDB Launches AI Initiative with Google Cloud to Help Developers Build AI Powered Applications

Expanded partnership between MongoDB and Google Cloud enables developers to use state-of-the-art AI foundation models from Google to build new classes of generative AI applications with expert assistance and professional services  NEW YORK, June 22, 2023 /PRNewswire/ — MongoDB, Inc. (NASDAQ: MDB) today at its developer conference MongoDB.local NYC announced a…

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MongoDB Atlas evolves to support generative AI application development

MongoDB said today it’s beefing up its cloud database MongoDB Atlas with a series of new products and features that it says will make it easier for developers to build modern applications. They include new generative artificial intelligence capabilities for MongoDB’s Vector Search feature, enabling the retrieval and personalization of…

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Import OpenAPI from URL doesn’t resolve external $refs – Help

denis 22 June 2023 17:58 1 When I import an OpenAPI spec that has external $refs, it imports fine if I import the folder from disk (where the folder has all the relevant files), but importing from URL doesn’t work – although the references are valid relative URLs. By comparison,…

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MongoDB adds vector search to Atlas database to help build AI apps

After trying to broaden its user base to include traditional database professionals last year, MongoDB is switching gears, adding features to turn its NoSQL Atlas database-as-a-service (DBaaS) into a more complete data platform for developers, including capabilities that support building generative AI applications. In addition to introducing vector search for…

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BLASTP error – too many positional arguments

BLASTP error – too many positional arguments 0 Hello! I am trying to obtain the functional annotation of multiple protein files in a folder using BLASTP. I am using Parallel to parallelize the job. I first tried with the following command: ls *.faa | parallel -a – blastp -query {}…

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MongoDB Launches AI Initiative with Google Cloud to Help

Expanded partnership between MongoDB and Google Cloud enables developers to use state-of-the-art AI foundation models from Google to build new classes of generative AI applications with expert assistance and professional services  NEW YORK, June 22, 2023 — MongoDB, Inc. (NASDAQ: MDB) today at its developer conference MongoDB.local NYC announced a new…

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to boost your AI projects

The best machine learning software is a powerful tool that empowers companies to harness big data and gain deep insights into customer behavior, satisfaction, and loyalty. It goes beyond standard query-based methods and finds patterns and oddities that might not have been seen otherwise. Some machine learning (ML) algorithms are…

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MongoDB makes multiple announcements, including Relational Migrator GA

MongoDB Relational Migrator simplifies the task of application modernisation by automating migrations from legacy databases such as Oracle Database, Microsoft SQL Server, MySQL and PostgreSQL to MongoDB Atlas. According to the company, all that’s needed is to point MongoDB Relational Migrator to an old database, and then it automatically generates…

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TCTTCTC) in a reference genome

Hello everyone, here’s my question: I would like to get all the genomic coordinates relative to a very small sequence (TCTTCTC) in a reference genome. I am aware that this would result in around 200,000 coordinates or so. I tried with blastn and with an alignent with bowtie/bwa, however the…

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MongoDB Ups the Ante with Vector Search for Generative AI

MongoDB has been a developer favourite for the longest time. The king of NoSQL database has added Vector Search, which greatly streamlines the integration of generative AI and semantic search into applications.  MongoDB today announced a suite of new announcements. This includes Google Cloud and MongoDB collaboration on an AI…

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Any way to get bcftools to query up to but not including the last site given in a region query

Any way to get bcftools to query up to but not including the last site given in a region query 1 This is kind of a silly example, but is there ay way to modify this query (without changing the positions), so that it does not return sites that overlap…

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Transfection Technologies Market Projected to Show Strong Growth: Promega, Lonza, SignaGen Laboratories

PRESS RELEASE Published June 21, 2023 The latest study released on the Global Transfection Technologies Market by AMA Research evaluates market size, trend, and forecast to 2028. The Transfection Technologies market study covers significant research data and proofs to be a handy resource document for managers, analysts, industry experts and…

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Gene Fragment Market Poised to Reach 566.37 Million USD, with Impressive CAGR of 11.40% during 2023-2029

PRESS RELEASE Published June 21, 2023 The global gene fragment market is projected to reach a value of 566.37 million USD by the end of 2029, exhibiting a robust compound annual growth rate (CAGR) of 11.40% during the forecast period of 2023-2029. This market growth is driven by advancements in…

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Meet Swift OpenAPI Generator | WWDC NOTES

Description: Discover how Swift OpenAPI Generator can help you work with HTTP server APIs whether you’re extending an iOS app or writing a server in Swift. We’ll show you how this package plugin can streamline your workflow and simplify your codebase by generating code from an OpenAPI document. Challenges of…

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Cross-phenotype relationship between opioid use disorder and suicide attempts: new evidence from polygenic association and Mendelian randomization analyses

Degenhardt L, Grebely J, Stone J, Hickman M, Vickerman P, Marshall BDL, et al. Global patterns of opioid use and dependence: harms to populations, interventions, and future action. Lancet. 2019;394:1560–79. Article  CAS  PubMed  PubMed Central  Google Scholar  Patten DK, Schultz BG, Berlau DJ. The Safety and Efficacy of Low-Dose Naltrexone…

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Global AI Training Dataset Market Size and Forecast

New Jersey, United States – The Global AI Training Dataset market is expected to grow at a significant pace, reports Verified Market Research. Its latest research report, titled “Global AI Training Dataset Market Insights, Forecast to 2030“. offers a unique point of view about the global market. Analysts believe that the…

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Error message when running qiime feature-classifier classify-consensus-blast – Technical Support

Newt (Aly) June 19, 2023, 2:43pm 1 Hello, I am getting this error message when running qiime feature-classifier classify-consensus-blast. As of now, the command seems to running, but I am not sure what the future warning message means. I’m using qiime2-2023.5 using ubuntu. Command: blastn -query /tmp/qiime2/newt/data/70940ada-947d-4c21-af08-457d2fc6aed1/data/dna-sequences.fasta -evalue 0.001 -strand…

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SRA toolkit access denied

SRA toolkit access denied 1 I was trying to get data from NCBI using SRA toolkit. As usual, I did prefetch and faster-dump commands, but access denied error was occurred. prefetch.2.11.0 err: query unauthorized while resolving query within virtual file system module – failed to resolve accession ‘SRR——‘ – Access…

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NGS Sample Preparation Market to Witness Significant Growth, Valued at USD 6.63 Billion by 2027, States Emergen Research

Emergen Research Logo Advancements in NGS platforms, reduced sequencing costs, and improved reimbursement drive market demand. VANCOUVER, BRITISH COLUMBIA, CANADA, June 19, 2023/EINPresswire.com/ — The Global NGS Sample Preparation Market is projected to reach USD 6.63 billion in 2027. Numerous advantages of high-performance sequencing compared to other genetic technologies, such as microarray…

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Global Metagenomic Sequencing Market Size and Forecast

New Jersey, United States – The Global Metagenomic Sequencing Market is comprehensively and accurately detailed in the report, taking into consideration various factors such as competition, regional growth, segmentation, and market size by value and volume. This is an excellent research study specially compiled to provide the latest insights into critical aspects…

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Research Fellow, Bioinformatician job with UNIVERSITY OF WESTERN AUSTRALIA

Medical School Opportunity for an experienced Bioinformatician to join a collaborative team and work on developing “systems genetics” technology. Level B, full-time appointment on a fixed term basis for 12 months Base salary range: $105,043 – $124,301 p.a. plus 17% superannuation The University of Western Australia…

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[E::idx_find_and_load] Could not retrieve index file for Singularity /NextFlow

[E::idx_find_and_load] Could not retrieve index file for Singularity /NextFlow 0 Hi I am writing my first code is dsl2 Nextflow using Singularity container as below main.nf process pbc_varicall { publishDir “/data/shared/clinical/LongRead/Data/resources/” container ‘docker://google/deepvariant:1.5.0’ input: path bam output: file “*” path ‘out_m84011_220902_175841_Chr20.vcf.gz’ script: “”” run_deepvariant –model_type PACBIO –ref ${params.ref_genome} –reads ${bam}…

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Software Engineer – Machine Learning (PyTorch) job with Kumo

Come and change the world of AI with the Kumo team! Companies spend millions of dollars each year to store terabytes (and increasingly more!) of enterprise data. However, although they are able to use this data effectively for historic analytics today, they’re typically only able to leverage a fraction of…

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Removing contamination from WGS nanopore reads prior to assembly

Removing contamination from WGS nanopore reads prior to assembly 1 Hello, I sent some isolated fungal DNA from a pure culture to a well-known sequencing company for sequencing using nanopore (promethion) and also illumina PE150 with the objective of generating a hybrid de-novo genome assembly using SPAdes. I assembled each…

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OpenAPI specification – handling ‘enum’ integer

Is your feature request related to a problem? Please describe. Values in enum are not used when automated requests are sent from an openapi definition. For example, where the following openapi definition exists, “paths”: { “/rule/”: { “get”: { “operationId”: “rule_list”, “summary”: “List all rules”, “description”: “”, “parameters”: [{ “name”:…

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Very few snp and indels variation were identified using PAV variation input file base on vg call

Very few snp and indels variation were identified using PAV variation input file base on vg call 0 Hi all, We want to find the snp and indels variation from the result vcf file BS_graph_call.vcf by using the pan_genome vg analysis software. There are only **fewer than 20 snp and…

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blast – How to get full alignment output from BLASTP?

Hmmm, firstly can you attempt multi-threading on a remote command via -num_threads 8… blastp -db nr -query X.fasta -out nr.X -num_threads 8 -num_descriptions 4000 -remote It’s a worth a try. Otherwise it could likely be a function of the network access or remote server resources. I don’t think this is…

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Future Trends and Innovations in Social Media API Landscape

Support Northern Colorado Journalism Show your support for North Forty News by helping us produce more content. It’s a kind and simple gesture that will help us continue to bring more content to you. Click to Donate   As the world becomes more interconnected, social media has become an essential…

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Global Metagenomics Kits Market Size and Forecast

New Jersey, United States – Verified Market Research recently published a research report titled, “Global Metagenomics Kits Market Insight, Forecast 2030“. The Global Metagenomics Kits market is elaborately discussed in the report so as to help readers to gain a sound understanding of key trends, top strategies, and potential growth opportunities. The…

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Identification of molecular mechanisms causing skin lesions of cutaneous leishmaniasis using weighted gene coexpression network analysis (WGCNA)

Data information We downloaded all the data used in this research from National Center for Biotechnology Information Gene Expression Omnibus (www.ncbi.nlm.nih.gov/geo/). We used the data set GSE1278317 to construct a co-expression network by Differential Gene Expression analysis (DGEs) and Weighted Gene Co-expression Network Analysis (WGCNA). The Data was obtained from…

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Using nanopore sequencing to identify fungi from clinical samples with high phylogenetic resolution

Fungal genomic DNA DNA extracted from Aspergillus niger (kindly provided by Dr. Takamitsu Imoto, Medical Research Institute, Kitano Hospital, Osaka, Japan) and a mock community DNA standard (Mycobiome Genomic DNA Mix, MSA-1010; ATCC, Manassas, VA, USA) were used to evaluate the validity of the sequencing methodology. The mock community standard…

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Bioinformatics Analyst Job in Illinois, Career, Jobs in Northwestern University

Department: WCAS NeurobiologySalary/Grade: EXS/8 Job Summary: Partners with clients to design, develop, implement and maintain business solutions regarding data management and analysis. This includes database administration, data consolidation, data analysis and management reporting. Utilizes software to generate metrics and develops actionable recommendations. Collaborates with various function teams such as…

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[slurm-users] Slurm version 23.02.3 is now available

We are pleased to announce the availability of Slurm version 23.02.3. The 23.02.3 release includes a number of fixes to Slurm stability, including potential slurmctld crashes when the backup slurmctld takes over. This also fixes some issues when using older versions of the command line tools with a 23.02 controller. Slurm can be…

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Can ChatGPT be used to advance drug discovery?

Chat GPT – which is a large language model (LLM) and belongs to a family of artificial intelligence (AI) known as generative AI – has been a revelation for many people around the world, and, since its launch, has been used by professionals in many industries to assist with work-related…

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Understanding Google Bard: Unveiling the Inner Workings, User Guide, and Controversy Surrounding the AI Chatbot

Bard, the latest addition to the artificial intelligence chatbot scene, is a cutting-edge creation by Google. This AI chatbot was introduced to users in March 2023, following an initial announcement in February. Initially, the software was only made available to a select group of users for testing purposes. Bard enters…

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Profitable Strategic Report on Mammalian Cell Expression System Market With Included Analysis of New Trends, Updates, and Forecast to 2030

The latest competent intelligence report published by WMR with the title “An Increase in Demand and Opportunities for Global Mammalian Cell Expression System Market 2023″ provides a sorted image of the Mammalian Cell Expression System industry by analysis of research and information collected from various sources that have the ability…

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Scientist, Assistant Bioinformatics, School of Medicine Neurology job with Emory Healthcare/Emory University

Discover Your Career at Emory University Emory University is a leading research university that fosters excellence and attracts world-class talent to innovate today and prepare leaders for the future. We welcome candidates who can contribute to the diversity and excellence of our academic community. Description JOB DESCRIPTION: Under minimal supervision,…

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CharCNN Models – Snowflake, PyTorch & Dask

June 15, 2023 |9 min read Development of CharCNN models with Capital One’s Tech interns – Part 2 June 15, 2023 |9 min read We all know that training machine learning models requires large amounts of data, but what if the machines available to us can’t handle all the data…

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BioSpace hiring Scientist I, Bioinformatics in North Chicago, Illinois, United States

The Genomics Research Center (GRC) is a center of excellence for genetics and genomics that supports both Discovery and Development. The GRC plays an integral role towards our goal of developing extraordinary genetics and genomics research, focusing on finding the right targets and helping us better understand not only human…

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Exonerate fails to find match

Exonerate fails to find match 0 Hi, I’m currently using Exonerate to find a match between these two sequences (see below). The percentage of identity between the sequences at both the nucleotide (72.5%) and amino acid (90% – 3’5′ Frame) levels seems quite high to me. Here are the sequences:…

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BLAST in R, taxonomy

BLAST in R, taxonomy 1 I am a student working on a microbiome project and I am using R to retrieve species names from NCBI taxonomy data. I have obtained the accession numbers through rBLAST and now I need to retrieve the corresponding species names. I have tried using different…

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Why a digital operating model is key to real-time AI

By George Trujillo, Principal Data and AI Strategist, DataStax Over the past couple months, I’ve met with 60+ executives in closed-room discussions and presented to over 400 attendees in virtual presentations. From these interactions, I’ve narrowed down five challenges that repeatedly come up. Do any of these look familiar in…

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New section for ChatGPT plugin manifest – Plugin Development

In the OpenAI blog entry Function calling and other API updates is this statement These use cases are enabled by new API parameters in our /v1/chat/completions endpoint, functions and function_call , that allow developers to describe functions to the model via JSON Schema, and optionally ask it to call a…

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OpenAI Upgrades GPT-4 and GPT-3.5 Turbo Models, Reduces API Prices

on June 13, 2023 at 1:00 pm OpenAI is rolling out updates for the GPT-3.5 Turbo and GPT-4 large language models and cutting the cost for organizations to access them through its APIs. The improved models also include a new ‘function calling’ feature that enables developers to simply describe a…

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openapi – How to convert a multi-file open api 2.0 definition to 3.0 spec definition without changing the file structure

I have multi-file open api 2.0 definition, main file is called main_openapi.yaml that contains the top level fields and further details are in separate files. I want to convert this definition to 3.0 spec definition without changing the folder structure or combining them in to one yaml file. Below are…

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What is Salesforce AI Cloud: Should you subscribe?

“These models, whether running through Amazon SageMaker or Google’s Vertex AI, will connect directly to AI Cloud through the Einstein GPT Trust Layer. In this scenario, customer data can remain within the customers’ trust boundaries,” the company said. This isn’t the first time someone has offered these capabilities. Several other…

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Vertex now open for everyone. What is it?

Google has made an important announcement regarding its generative AI support in Vertex AI, the company’s robust machine learning platform. This development signifies a significant milestone as these AI capabilities are now generally available to developers. With models such as PaLM 2, Imagen, and Codey at the core, Vertex AI…

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Query regarding DNA Methylation Bisulfite Sequencing data analysis

Query regarding DNA Methylation Bisulfite Sequencing data analysis 0 Hi, I am working on DNA Methylation Bisulfite Sequencing data analysis using methylkit and genomation. I am facing an issue while annotating my differentially methylated gene data using annotatewithGeneparts function from genomation. Actually, the number of rows/entries in dist.to.tss sheet and…

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How to validate request path parameters for API Gateway in OpenAPI definition

Currently, there is a way to validate headers, query parameters, and the request body using a validator. But there isn’t a way to do this validation for request path parameters. The same question has been asked in the thread forums.aws.amazon.com/thread.jspa?threadID=267060 from 2017. However, there hasn’t been an answer in that…

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Global Molecular Modeling Software For Chemistry Market Size and Forecast

New Jersey, United States – The market research report offers an elaborate study of the Global Molecular Modeling Software For Chemistry Market to help players prepare themselves well to tackle future growth challenges and ensure continued business expansion. With flawless analysis, in-depth research, and accurate forecasts, it provides easy-to-understand and reliable studies…

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Global Open API Market Size and Forecast

New Jersey, United States – Verified Market Research recently published a research report titled, “Global Open API Market Insight, Forecast 2030“. The Global Open API market is elaborately discussed in the report so as to help readers to gain a sound understanding of key trends, top strategies, and potential growth opportunities. The…

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Neo4j Announces New Integrations With Google Cloud

Graph database and analytics firm Neo4j has announced new product integrations with the latest generative AI features in Google Cloud’s Vertex AI. The new integrations will allow enterprises to harness knowledge graphs built on Neo4j’s fully managed cloud offerings in the Google Cloud Platform for generative AI insights and recommendations….

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A Comprehensive Study Exploring Plant-based Vaccines Market

PRESS RELEASE Published June 12, 2023 The latest study released on the Global Plant-based Vaccines Market by AMA Research evaluates market size, trend, and forecast to 2028. The Plant-based Vaccines market study covers significant research data and proofs to be a handy resource document for managers, analysts, industry experts and…

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Shaping the Future of Biotechnology

CRISPR Technology Market Allied Market Research Analyst have added a new research study on Title CRISPR Technology Market, Global Outlook and Forecast 2023-2030 with detailed information & Key Players Such as Synthego, Merck, Thermo Fisher Scientific, Integrated DNA Technologies, GenScript, Agilent Technologies, New England Biolabs, Cellecta, Origene Technologies, Horizon Discovery…

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Post mapping extract query sequence mapped to each gene feature

Post mapping extract query sequence mapped to each gene feature 0 I did a mapping on my query reads to the genome using bwa. I wish to extract the query sequence that matched with the gene feature. I found column 10 in samtools to provide information on the query sequence…

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R Archives – Master Data & AI Skills

Power BI, Power Query, R, R for Power BI Power BI is a powerful data visualization and business intelligence tool that allows users to connect to various data sources, create interactive reports and dashboards, and share them with… Power BI, R, R for Power BI The ggplot2 package is the…

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Query sequence capture using genome sequence

Query sequence capture using genome sequence 0 I did a mapping on my query reads to the genome using bwa. I wish to extract the query sequence that matched with the gene feature. I found column 10 in samtools to provide information on the query sequence that matched to genome…

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Solved In the following R query: # Load Libraries

In the following R query: # Load Libraries library(ggplot2) library(usmap) # Load state-level GDP data economic_data <- read.csv(“GPD by State table.csv”) # Convert state names to lowercase for merging us_states$region <- tolower(us_states$region) economic_data$State <- tolower(economic_data$State) # Merge economic data with us_states dataset based on state names merged_data <- merge(us_states, economic_data,…

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Characteristics of molecular markers associated with chloroquine resistance in Plasmodium vivax strains from vivax malaria cases in Yunnan Province, China | Malaria Journal

Sample amplification information and PCR product amplification sequencing A total of 753 cases infected with mono-P. vivax were diagnosed and confirmed in Yunnan Province in 2014, 2020, 2021, and 2022. The patients were predominantly young adult males (84.0%, 632/753), with a smaller number of females (16.0%, 121/753); 81.8% (616/753) of…

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Real-time Analytics News for Week Ending June 10

In this week’s real-time analytics news: AWS announced access to the open-source LLM Falcon 40B and other new offerings. Keeping pace with news and developments in the real-time analytics market can be a daunting task. We want to help by providing a summary of some of the important real-time analytics…

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Accounting for 16S rRNA copy number prediction uncertainty and its implications in bacterial diversity analyses

Time-independent variation is present in 16S GCN evolution To evaluate the extent of time-independent or intraspecific variation in 16S GCN, we examined 5437 pairs of genomes with identical 16S rRNA gene alignments. The 16S GCN differs in 607 (11%) of them, suggesting the presence of significant time-independent variation. For the…

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Efflux pump gene amplifications bypass necessity of multiple target mutations for resistance against dual-targeting antibiotic

Strains and growth conditions All strains and plasmids used in this work are described in Supplementary Table 1. The clinical isolates were obtained from the Cystic Fibrosis Foundation Isolate Core at Seattle Children’s Hospital and were originally isolated from two different cystic fibrosis patients. Distribution of these isolates is covered by…

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Programming Education Market 2023 Growth Drivers and Future Outlook

” Report on the Global Programming Education Market for 2023 shows how the market is doing right now. Additionally, it denotes crucial market elements that help consumers make crucial business decisions and advance the expansion of market share. Request a sample report @ www.orbisresearch.com/contacts/request-sample/6974609 The report also hides basic product…

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Neo4j unveils generative AI features for Google Cloud Vertex

Neo4j, the graph database and analytics company, announced new product integration with Google Cloud’s latest generative AI features in Vertex AI, Google’s large language model (LLM) platform. The result empowers enterprise customers to harness knowledge graphs built on Neo4j’s fully managed cloud offerings in the Google Cloud Platform for generative…

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Groundbreaking study sequences nearly half of primate species, yielding great insights for humans

The groundbreaking research marks a major milestone in genomic research, paving the way for further exploration and discovery across a wide range of species. A group of researchers from over 20 nations have generated the most comprehensive primate sequencing dataset to date. More than 800 genomes from 233 species around…

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Contextual AI launches with $20M to build more reliable large language models for enterprises

Contextual AI Inc., an artificial intelligence development startup founded earlier this year, exited stealth mode today with $20 million in seed funding. Palo Alto, California-based Contextual AI raised the capital from a group of investors led by Bain Capital Ventures. The investment firm was joined by Lightspeed Venture Partners, Greycroft…

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Google Cloud, Mayo Clinic Collaborate to Bring Generative AI to Healthcare

Google Cloud on Wednesday announced a collaboration with Mayo Clinic to transform traditional healthcare by using generative artificial intelligence (AI). The partnership will start with Google Cloud’s Enterprise Search in Generative AI App Builder (Gen App Builder) to enhance clinical workflows, making it easier for clinicians and researchers to find the needed…

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Third-Generation Sequencing Professional Market 2031 Key Insights and Leading Players Stratos, Quantapore, Oxford Nanopore Technology, etc

“ Report on the Global Third-Generation Sequencing Professional Market for 2023 shows how the market is doing right now. Additionally, it denotes crucial market elements that help consumers make crucial business decisions and advance the expansion of market share. Request a sample report @ www.orbisresearch.com/contacts/request-sample/6798693 The report also hides basic…

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Blast reads classification

I am using MagicBLAST to classify reads obtained from NGS analysis on highly degraded DNA samples. I chose to use MagicBLAST because I read that it is optimal for short sequences and it allows me to use Fastq format and perform paired-end analysis, unlike blast+. The command I am running…

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REST API with IBM App Connect with OpenAPI 3.0

REST API with IBM App Connect with OpenAPI 3.0 REST API with IBM App Connect with OpenAPI3.0 is a way of describing HTTP-based Applications, which are typically RESTful APIs. An open API definition comes in the form of a YAML or JSON file that describes the inputs and outputs of…

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Understanding Cosine Similarity in Python with Scikit-Learn

Cosine similarity proved useful in many different areas, such as in machine learning applications, natural language processing, and information retrieval. After reading this article, you will know precisely what cosine similarity is, how to run it with Python using the scikit-learn library (also known as sklearn), and when to use…

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Generative AI Support in Google’s Vertex AI Now Generally Available, Partners Benefit from Its Features

Google has revealed that generative AI support in Vertex AI, the company’s machine learning platform, is now generally available. The features draw from Google’s models, such as PaLM 2, Imagen, and Codey. With Vertex AI, developers can access PaLM’s features for text generation and classification, creating ChatGPT-like multi-turn chat experiences,…

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Apply for samples

BioResource biobanking We extract DNA from blood or saliva donated by our participants. The DNA is quality controlled, banked  and then analysed to study genetic variation by genotyping. We also store plasma and serum from blood samples. All samples are sent to the NIHR-funded National Biosample Centre (NBC) in Milton Keynes, for processing,…

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DataStax Adds Vector Search to Astra DB on Google Cloud

With so much data piling up everywhere, loaded database nodes are becoming a serious challenge for users to search faster and more accurately to find what they are seeking. DataStax, which makes a real-time database cloud service built upon open source Apache Cassandra, announced today that its Database as a…

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Best AI Software 2023

The demand for artificial intelligence software (AI) has increased significantly in recent years, and organizations of all sizes are adopting artificial intelligence to stay competitive. The top AI software and services detailed in this article use artificial intelligence techniques such as generative AI, machine learning, natural language processing, computer vision,…

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Google’s generative AI support in Vertex AI is now generally available

Google announced coming that its generative AI support in Vertex AI, The company’s instrumentality learning platform, is now mostly available. Based connected Google’s models for illustration PaLM 2, Imagen and Codey, Vertex AI offers developers entree to The PaLM’s features for generating and classifying text, building ChatGPT-like multi-turn chat experiences…

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Salesforce Extends Data Cloud With Google Cloud Platform Partnership

Salesforce recognizes that customers could have data stored in external systems, as well as custom AI models. The new partnership with Google Cloud allows organizations to bring data and large language models (LLMs) from Google, to support what happens within Salesforce Data Cloud.  Data Cloud is Salesforce’s CDP (customer data…

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ChatGPT optimized for bioinformatics questions

Tool:ChatGPT optimized for bioinformatics questions 1 Hey everyone! I launched a new chatbot today that is bioinformatics focused! It’s trained on bioinformatics content and should help debug / ideate much faster for you than vanilla ChatGPT. Check it out here: ai.tinybio.cloud/chat Thanks! gpt • 165 views • link updated 1…

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Google’s generative AI support in Vertex AI is now generally available

Google announced today that its generative AI support in Vertex AI, the company’s machine learning platform, is now generally available. Based on Google’s models like PaLM 2, Imagen and Codey, Vertex AI offers developers access to the PaLM’s features for generating and classifying text, building ChatGPT-like multi-turn chat experiences and…

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