Tag: RDocumentation

Description Copies a database connection to a file or to another database connection. It can be used to save an in-memory database (created using dbname = “:memory:” or dbname = “file::memory:”) to a file or to create an in-memory database a copy of another database. Usage sqliteCopyDatabase(from, to) Arguments from…

Description The H2O Explainability Interface is a convenient wrapper to a number of explainabilty methods and visualizations in H2O. The function can be applied to a single model or group of models and returns a list of explanations, which are individual units of explanation such as a partial dependence plot…

RunPCA(object, …) # S3 method for default RunPCA( object, assay = NULL, npcs = 50, rev.pca = FALSE, weight.by.var = TRUE, verbose = TRUE, ndims.print = 1:5, nfeatures.print = 30, reduction.key = “PC_”, seed.use = 42, approx = TRUE, … ) # S3 method for Assay RunPCA( object, assay =…

ggplot2: Adjust the legends distance to the x-axis? I want to shrink the legends distance to the x-axis, but I can’t find a way to do it. Is it possible? Example code: library(ggplot2) ggplot(mtcars, aes(x = gear, y = mpg, fill = gear)) + geom_bar(stat = “identity”) + theme(legend.position =…

Description Gets the protocols that have been saved for a particular pipeline. Usage labkey.pipeline.getProtocols(baseUrl=NULL, folderPath, taskId, path, includeWorkbooks = FALSE) Arguments baseUrl a string specifying the baseUrl for the LabKey server folderPath a string specifying the folderPath taskId a string identifier for the pipeline path a string for the relative…

Description This will delete the supplied file or folder under the specified LabKey Server project using WebDAV. Usage labkey.webdav.delete( baseUrl=NULL, folderPath, remoteFilePath, fileSet=”@files” ) Arguments baseUrl a string specifying the baseUrl for the labkey server folderPath a string specifying the folderPath remoteFilePath the path to delete, relative to the LabKey…