Tag: ReactomePA
Whole exome sequencing and transcriptome analysis in two unrelated patients with novel SET mutations
Moeschler JB, Shevell M, Committee on G. Comprehensive evaluation of the child with intellectual disability or global developmental delays. Pediatrics. 2014;134:e903–18. PubMed Google Scholar Patel DR, Cabral MD, Ho A, Merrick J. A clinical primer on intellectual disability. Transl Pediatr. 2020;9:S23–35. PubMed PubMed Central Google Scholar Baker K, Devine RT,…
Handling NA’s in Deseq2
Hi everyone First of all thank you for making rna-seq data much more accessible to an average clinical doctor through the DEseq2 packages and vignettes. I am though running into some trouble: I have a dataset of Nanostring mRNA-data from clinical study, which later was followed up. I therefore have…
Bioconductor – multiSight
DOI: 10.18129/B9.bioc.multiSight Multi-omics Classification, Functional Enrichment and Network Inference analysis Bioconductor version: Release (3.17) multiSight is an R package providing functions to analyze your omic datasets in a multi-omics manner based on Stouffer’s p-value pooling and multi-block statistical methods. For each omic dataset you furnish, multiSight provides classification models…
Bioconductor – reactome.db
This package is for version 2.14 of Bioconductor; for the stable, up-to-date release version, see reactome.db. A set of annotation maps for reactome Bioconductor version: 2.14 A set of annotation maps for reactome assembled using data from reactome Author: Willem Ligtenberg Maintainer: Willem Ligtenberg <willem.ligtenberg at openanalytics.eu> Citation…
