Tag: REditools2

RNA Editing data from RNA-seq

RNA Editing data from RNA-seq 1 Does anyone help me to generate RNA editing data from raw RNA-seq data of FUNGALmodel system which has reference genome at JGI? Also would like to explain the protocol of RNA editing. NOTE Most of the RNA editing tool I found is for human…

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REditools2 (HPC-reditools) de-novo editing prediction from RNAseq?

I am having some trouble with REditools2 (HPC-Reditools). In the original version of reditools there was a python script for de-novo prediction of editing sites from RNAseq data using a strategy outlined in Picardi et al 2012. I assumed reditools2 would have this same feature. However, after inputting the appropriate…

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