Tag: scVelo
Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipeline
Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipeline 1 Hi everyone, I have 15 scRNA-seq samples that I have aggregated with cellranger aggr pipeline. My problem is that, I would like to use scVelo on my dataset. However, I will need the unspliced counts for this. I…
Getting unspliced counts for my data generated from cellranger aggr pipeline
Getting unspliced counts for my data generated from cellranger aggr pipeline 0 Hi everyone, I have 15 scRNA-seq samples that I have aggregated with cellranger aggr pipeline. My problem is that, I would like to use scVelo on my dataset. However, I will need the unspliced counts for this. I…
Identification of a regulatory pathway inhibiting adipogenesis via RSPO2
Integration of APC scRNA-seq data reveals heterogeneity of adipocyte progenitor cells In a previous study9, we defined Lin−Sca1+CD142+ APCs as adipogenesis regulatory (Areg) cells and demonstrated that these cells are both refractory toward adipogenesis and control adipocyte formation of APCs through paracrine signaling. In contrast, Merrick et. al.4 observed that Lin−CD142+ cells…
