Tag: SFS
ngsJulia: population genetic analysis of next-generation DNA sequencing data with Julia language
doi: 10.12688/f1000research.104368.2. eCollection 2022. Affiliations Expand Affiliations 1 Department of Life Sciences, Imperial College London, London, UK. 2 Institute of population genetics, University of Veterinary Medicine Vienna, Vienna, Austria. 3 Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden. 4 School of Biological and Behavioural Science, Queen Mary,…
Recent Advances in Metagenomic Approaches, Applications, and Challenge
Coughlan LM, Cotter PD, Hill C, Alvarez-Ordóñez A (2015) Biotechnological applications of functional metagenomics in the food and pharmaceutical industries. Front Microbiol 6:1–22. doi.org/10.3389/fmicb.2015.00672 Article Google Scholar Mirete S, Morgante V, González-Pastor JE (2016) Functional metagenomics of extreme environments. Curr Opin Biotechnol 38:143–149. doi.org/10.1016/j.copbio.2016.01.017 Article CAS PubMed Google Scholar Behzad…
Comparison of miRNA transcriptome of exosomes in three categories of somatic cells with derived iPSCs
doi: 10.1038/s41597-023-02493-5. Chunlai Yu # 1 , Mei Zhang # 2 , Yucui Xiong 3 , Qizheng Wang 3 , Yuanhua Wang 3 , Shaoling Wu 4 , Sajjad Hussain 3 5 , Yan Wang 3 , Zhizhong Zhang 3 , Nini Rao 6 , Sheng Zhang 7 , Xiao Zhang 8 9 Affiliations Expand Affiliations 1 University of Electronic Science…
admixture plot ggplot2
By clicking “Post Your Answer”, you agree to our terms of service and acknowledge that you have read and understand our privacy policy and code of conduct. ggplot2 is a well-known data visualization package to use in R. As ggplot2 is well developed from the beginning, engineers can spend more…
Unexpected break in site frequency spectrum pattern
Unexpected break in site frequency spectrum pattern 1 Hi there, I’ve been generating lots of Stacks::populations outputs with varying -R and -min_maf values (see definitions below) in an effort to understand how changing these variables changes the site frequency spectrum. I’m hoping that understanding how many rare variants are being…
Isoform-specific knockdown of long and intermediate prolactin receptors interferes with evolution of B-cell neoplasms
Knockdown of LFPRLR reduces splenic B-cell subsets in SLE-prone mice To investigate whether the PRL-LFPRLR axis raises the risk of initiation of B-cell malignancies, we compared SLE-prone MRL-lpr mice treated with either control SMO or LFPRLR SMO. Among SLE-prone models, we chose MRL-lpr mice because they accumulate genetic lesions indicative…
Apply for Teaching Positions; Details Inside
Home News Applications are invited by Punjab Agriculture University for Teaching Assistant posts. check out the eligibility criteria, age limit, salary and other details here. Punjab Agricultural university School…
arlequin SFS output
arlequin SFS output 1 Hi, I’ve converted a ped file to arlequin using pgdspider. As I don’t have the ancestral state, I haven’t done the numeric conversion. Yet, when I ask arlequin to output the SFS, it returns MAF files, i.e., theoretically, the folded SFS. When I look into this…
