Tag: SKAT-O

Rvtests SKAT-O output

Rvtests SKAT-O output 0 Hi there, After running SKAT-O, the output has some columns that I would like to understand better: NumVar: number of variants in the gene (or site) NumPolyVar: number of Polymorphic Genotypes What’s the difference? Thank you rvtests sequencing SNP • 9 views Login before adding your…

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Rare variant association analysis (SKAT-O)

Hello everyone, I was wondering if it is statistically acceptable to perform SKAT-O analysis one a single gene. To elaborate, I am looking in a miRNA gene (80nt length) and I have found a small number of rare variants present in my case group, but none in my control group….

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