Tag: systemPipeRdata

Install R-systemPipeRdata on macOS with MacPorts

To install R-systemPipeRdata, paste this in macOS terminal after installing MacPorts sudo port install R-systemPipeRdata Copy More instructions Report an issue with this port If not done already, install MacPorts. To install R-systemPipeRdata, run the following command in macOS terminal (Applications->Utilities->Terminal) sudo port install R-systemPipeRdata Copy To see what files…

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Bioconductor – RNASeqR

DOI: 10.18129/B9.bioc.RNASeqR     RNASeqR: an R package for automated two-group RNA-Seq analysis workflow Bioconductor version: Release (3.11) This R package is designed for case-control RNA-Seq analysis (two-group). There are six steps: “RNASeqRParam S4 Object Creation”, “Environment Setup”, “Quality Assessment”, “Reads Alignment & Quantification”, “Gene-level Differential Analyses” and “Functional Analyses”….

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Bioconductor – systemPipeRdata

DOI: 10.18129/B9.bioc.systemPipeRdata     This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see systemPipeRdata. systemPipeRdata: NGS workflow templates and sample data Bioconductor version: 3.9 systemPipeRdata is a helper package to generate with a single command NGS workflow templates that are intended to be used…

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