Tag: tblastx
BLAST Basic Local Alignment Search Tool
Keywords BLAST, bioinformatics, heuristic algorithm, program, biological sequence, proteins, nucleotides, database sequences, maximal segment pair, alignments, DNA and RNA sequences. Introduction BLAST (basic local alignment search tool) in bioinformatics, is an algorithm and program for comparing primary biological sequence information, such as the amino acid sequences of proteins or the…
| EasyBiologyClass
Bioinformatics is an interdisciplinary field that analyzes and interprets biological data by combining biology, computer science, and statistics. There are various tools and techniques available for data analysis and interpretation. The software tools used in bioinformatics range from simple command-line utilities to more complex graphical programs and standalone web-services made…
An intronic transposon insertion associates with a trans-species color polymorphism in Midas cichlid fishes
Conflicting results suggest a missing variant In order to narrow down candidates for the causal genetic variant, we performed genome-wide association mapping separately in individual lake populations (previously, association mapping was only performed across the whole species flock5). Interestingly, despite clear association peaks in the crater lakes (Fig. 1a, b), the…
blastx versus tblastx
hello everyone I have a question about the blast. I admit that I do not understand everything. I have been asked to blastx an fsa file of arabidopsis thaliana sequences against an oak gene model. In order to see if there were any matching sequences between the two species: My…
