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Tag: WXS
E-IT hiring Bioinformatics Business Analyst in United States
Company Description E-IT Professionals Corp. (EIT) is an award-winning IT consulting, recruitment, management, and staffing organization founded in 1999. EIT is comprised of around 320 Information Technology Consultants and boasts revenues approaching $21M overall. Our dedicated team of professionals in the US and India serves clients from various geographies. We…
including samples for which group is unknown to help adjust for another variable
Hi, I want to compare the mRNA expression in cancer patients that have a specific mutation vs. cancer patients that don’t have said mutation, using data from TCGA. I’m trying to combine data from two different tumor types (LUSC and LUAD), which I know is not appropriate to do given…
Initial Genomic Analysis of BRCA Prospective
CPTAC3-BRCA-TP: WXS Copy number analysis (GISTIC2) CPTAC3-BRCA-TP: Mutation Significance Analysis (MutSig2CV) CPTAC3-BRCA-TP: Mutation Signature Analysis (SignatureAnalyzer) CPTAC3-BRCA-TP: Mutation Signature Analysis Reduced Hyper Mutant Effect (SignatureAnalyzer) CPTAC3-BRCA-noHyper: Mutation Significance Analysis (MutSig2CV) CPTAC3-BRCA-noHyper: Mutation Signature Analysis (SignatureAnalyzer) CPTAC3-BRCA-noHyper: Mutation Signature Analysis Reduced Hyper Mutant Effect (SignatureAnalyzer) CPTAC3-BRCA-BasalTNBC: WXS Copy number analysis (GISTIC2)…
Detailed differences between sambamba and samtools
3 month , My first post in the new student group , The false-positive mutation appears because duplicates mark Not enough ?, Tells the story of supplementary read It won’t be GATK MarkDuplicates Marked as duplicates The problem of . after , In response to this question , I began…