Tag: WXS

E-IT hiring Bioinformatics Business Analyst in United States

Company Description E-IT Professionals Corp. (EIT) is an award-winning IT consulting, recruitment, management, and staffing organization founded in 1999. EIT is comprised of around 320 Information Technology Consultants and boasts revenues approaching $21M overall. Our dedicated team of professionals in the US and India serves clients from various geographies. We…

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including samples for which group is unknown to help adjust for another variable

Hi, I want to compare the mRNA expression in cancer patients that have a specific mutation vs. cancer patients that don’t have said mutation, using data from TCGA. I’m trying to combine data from two different tumor types (LUSC and LUAD), which I know is not appropriate to do given…

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Initial Genomic Analysis of BRCA Prospective

CPTAC3-BRCA-TP: WXS Copy number analysis (GISTIC2) CPTAC3-BRCA-TP: Mutation Significance Analysis (MutSig2CV) CPTAC3-BRCA-TP: Mutation Signature Analysis (SignatureAnalyzer) CPTAC3-BRCA-TP: Mutation Signature Analysis Reduced Hyper Mutant Effect (SignatureAnalyzer) CPTAC3-BRCA-noHyper: Mutation Significance Analysis (MutSig2CV) CPTAC3-BRCA-noHyper: Mutation Signature Analysis (SignatureAnalyzer) CPTAC3-BRCA-noHyper: Mutation Signature Analysis Reduced Hyper Mutant Effect (SignatureAnalyzer) CPTAC3-BRCA-BasalTNBC: WXS Copy number analysis (GISTIC2)…

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Detailed differences between sambamba and samtools

3 month , My first post in the new student group , The false-positive mutation appears because duplicates mark Not enough ?, Tells the story of supplementary read It won’t be GATK MarkDuplicates Marked as duplicates The problem of . after , In response to this question , I began…

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